; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G08220 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G08220
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationClcChr07:21574543..21575953
RNA-Seq ExpressionClc07G08220
SyntenyClc07G08220
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-10873.85Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD
        MAGF+PLGG    GR  NYHLPTTTT+ T          +GLFWY+NYE LE W +QQQ Q+Q GEGFVYSGDESP RSSLVM+RSGR  GGG V SCQD
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD

Query:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV
        CGNQAKKDC++MRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLR   +N KRP+DN AASSGLEMGNFPVEV+STAVFRCVRMTTLDETNDQ+AYQTAV
Subjt:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV

Query:  NIGGHIFKGILYDHGPEQQLQ---QQPPTSASPDASALLITTAE--------SAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        NIGGH FKGILYDHGPEQQ Q     PP SASPD   LLIT           SAALLDPPP YP PL+TY+A GTQFFLPPTS
Subjt:  NIGGHIFKGILYDHGPEQQLQ---QQPPTSASPDASALLITTAE--------SAALLDPPPQYPTPLSTYIATGTQFFLPPTS

XP_022942307.1 protein SHORT INTERNODES-like [Cucurbita moschata]8.4e-10874.11Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD
        MAGFFPLGG    GR  NYHLPTTTT+ T          +GLFWY+NYE L  W +QQQ Q+Q GEGFVYSGDESP RSSLVM+RSGR  GGG V SCQD
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD

Query:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV
        CGNQAKKDC++MRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLR   +N KRP+DN AASSGLEM NFPVEV+STAVFRCVRMTTLDETNDQ+AYQTAV
Subjt:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV

Query:  NIGGHIFKGILYDHGPEQQLQ--QQPPTSASPDASALLITTAE--------SAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        NIGGH FKGILYDHGPEQQ Q    PP SASPD  ALLIT           SAALLDPPP YP PL+TY+A GTQFFLPPTS
Subjt:  NIGGHIFKGILYDHGPEQQLQ--QQPPTSASPDASALLITTAE--------SAALLDPPPQYPTPLSTYIATGTQFFLPPTS

XP_022982329.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima]4.9e-10875.09Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD
        MAGFFPLGG    GR  NYHLPTTTT+            +GLFWY+NYE L  W +QQQ Q+Q GEGFVYSGDESP RSSLVM+RSGR  GGG V SCQD
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD

Query:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV
        CGNQAKKDC++MRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLR  A+N KRP+DN AASSGLEMGNFP+EV+STAVFRCVRMTTLDETNDQ+AYQTAV
Subjt:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV

Query:  NIGGHIFKGILYDHGPEQQLQ-QQPPTSASPDASALLI----TTAE----SAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        NIGGH FKGILYDHGPEQQ Q   PP SASPD  ALLI    TT E    SAALLDPPP YP PL+TY+A GTQFFLPPTS
Subjt:  NIGGHIFKGILYDHGPEQQLQ-QQPPTSASPDASALLI----TTAE----SAALLDPPPQYPTPLSTYIATGTQFFLPPTS

XP_038881624.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida]9.2e-13185.82Show/hide
Query:  MKNMAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTS
        MKNMAGFFPL G GSSGRG NY  PTTTT+ TT GGEIIHP +GLFWYKNYERLETWEEQQQ QEQGGEGFVYSGDESPARSSLVMVRSGRGG GG V S
Subjt:  MKNMAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTS

Query:  CQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQ
        CQDCGNQAKKDCV+MRCRTCCKSRGFECETHVKSTWVPASKRR+RHLRC  SNPKRPKD  AASSGLEMG FP EV+STAVFRCVRMTTLDET++Q AYQ
Subjt:  CQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQ

Query:  TAVNIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        TAVNIGGHIFKGILYDHGPE     QPPTSASP+  ALLITTAESA LLDPPP YPTPL+TYI  GTQFFLPPTS
Subjt:  TAVNIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS

XP_038881630.1 protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida]8.6e-12985.66Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD
        MAGFFPL G GSSGRG NY  PTTTT+ TT GGEIIHP +GLFWYKNYERLETWEEQQQ QEQGGEGFVYSGDESPARSSLVMVRSGRGG GG V SCQD
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD

Query:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV
        CGNQAKKDCV+MRCRTCCKSRGFECETHVKSTWVPASKRR+RHLRC  SNPKRPKD  AASSGLEMG FP EV+STAVFRCVRMTTLDET++Q AYQTAV
Subjt:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV

Query:  NIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        NIGGHIFKGILYDHGPE     QPPTSASP+  ALLITTAESA LLDPPP YPTPL+TYI  GTQFFLPPTS
Subjt:  NIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein9.1e-10875.97Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHP-NEGLFWYKNYERLETWE-----EQQQP-QEQGGEGFVYSGDESPARSSLVMVRSGR--GGG
        MAGFFPL G GS GR  NYH PT TT     GGEIIHP  EGLFWYKNYERLETWE     +QQQP QEQGGEGFVYSGDESPARSSLVMVRSGR  GGG
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHP-NEGLFWYKNYERLETWE-----EQQQP-QEQGGEGFVYSGDESPARSSLVMVRSGR--GGG

Query:  GGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN--PAASSGLEMGNFPVEVNSTAVFRCVRMTTLDE
        GG VTSCQDCGNQAKKDCV+MRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR    N KRPKD      SSGL+MGNFP EV + AVFRCVRMT+LDE
Subjt:  GGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN--PAASSGLEMGNFPVEVNSTAVFRCVRMTTLDE

Query:  TNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        T+DQYAYQTAVNIGG IFKGILYDHGPE   Q  PP S+S            SAALLDP P YPTPLSTYI  GTQFFLPP+S
Subjt:  TNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS

A0A1S3CNX3 protein SHI RELATED SEQUENCE 1-like1.1e-10574.65Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHP-NEGLFWYKNYERLETWE------EQQQP-QEQGGEGFVYSGDESPARSSLVMVRSGRGG--
        MAGFFPL G GS GR  NYH PT TT     GGEIIHP  EGLFWYKNYERLETWE      +QQQP QEQGGEGFVYSGDESPARSSLVMVRSGRGG  
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHP-NEGLFWYKNYERLETWE------EQQQP-QEQGGEGFVYSGDESPARSSLVMVRSGRGG--

Query:  GGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN--PAASSGLEMGNFPVEVNSTAVFRCVRMTTLD
        GGG VTSCQDCGNQAKKDC +MRCRTCCKSRGFECETHVKSTWVPASKRRDR LR    N KRPKD      SSGL+M NFP+EV + AVFRCVRMTTLD
Subjt:  GGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN--PAASSGLEMGNFPVEVNSTAVFRCVRMTTLD

Query:  ETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        ET+DQYAYQTAVNIGGHIFKGILYDHGPEQ     PP+S+S            +AALLD  P YPTPLSTYI  GTQFFLPP+S
Subjt:  ETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS

A0A5A7TNR6 Protein SHI RELATED SEQUENCE 1-like1.1e-10574.65Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHP-NEGLFWYKNYERLETWE------EQQQP-QEQGGEGFVYSGDESPARSSLVMVRSGRGG--
        MAGFFPL G GS GR  NYH PT TT     GGEIIHP  EGLFWYKNYERLETWE      +QQQP QEQGGEGFVYSGDESPARSSLVMVRSGRGG  
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHP-NEGLFWYKNYERLETWE------EQQQP-QEQGGEGFVYSGDESPARSSLVMVRSGRGG--

Query:  GGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN--PAASSGLEMGNFPVEVNSTAVFRCVRMTTLD
        GGG VTSCQDCGNQAKKDC +MRCRTCCKSRGFECETHVKSTWVPASKRRDR LR    N KRPKD      SSGL+M NFP+EV + AVFRCVRMTTLD
Subjt:  GGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN--PAASSGLEMGNFPVEVNSTAVFRCVRMTTLD

Query:  ETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        ET+DQYAYQTAVNIGGHIFKGILYDHGPEQ     PP+S+S            +AALLD  P YPTPLSTYI  GTQFFLPP+S
Subjt:  ETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS

A0A6J1FUH1 protein SHORT INTERNODES-like4.1e-10874.11Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD
        MAGFFPLGG    GR  NYHLPTTTT+ T          +GLFWY+NYE L  W +QQQ Q+Q GEGFVYSGDESP RSSLVM+RSGR  GGG V SCQD
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD

Query:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV
        CGNQAKKDC++MRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLR   +N KRP+DN AASSGLEM NFPVEV+STAVFRCVRMTTLDETNDQ+AYQTAV
Subjt:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV

Query:  NIGGHIFKGILYDHGPEQQLQ--QQPPTSASPDASALLITTAE--------SAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        NIGGH FKGILYDHGPEQQ Q    PP SASPD  ALLIT           SAALLDPPP YP PL+TY+A GTQFFLPPTS
Subjt:  NIGGHIFKGILYDHGPEQQLQ--QQPPTSASPDASALLITTAE--------SAALLDPPPQYPTPLSTYIATGTQFFLPPTS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like2.4e-10875.09Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD
        MAGFFPLGG    GR  NYHLPTTTT+            +GLFWY+NYE L  W +QQQ Q+Q GEGFVYSGDESP RSSLVM+RSGR  GGG V SCQD
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQD

Query:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV
        CGNQAKKDC++MRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLR  A+N KRP+DN AASSGLEMGNFP+EV+STAVFRCVRMTTLDETNDQ+AYQTAV
Subjt:  CGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAV

Query:  NIGGHIFKGILYDHGPEQQLQ-QQPPTSASPDASALLI----TTAE----SAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        NIGGH FKGILYDHGPEQQ Q   PP SASPD  ALLI    TT E    SAALLDPPP YP PL+TY+A GTQFFLPPTS
Subjt:  NIGGHIFKGILYDHGPEQQLQ-QQPPTSASPDASALLI----TTAE----SAALLDPPPQYPTPLSTYIATGTQFFLPPTS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 16.6e-4737.18Show/hide
Query:  MAGFFPLGGAGSSGR----GSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQ-------------------------------GG
        MA FF LGG           S   +PT + +      E  H +        Y+  E W+    PQ Q                                 
Subjt:  MAGFFPLGGAGSSGR----GSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQ-------------------------------GG

Query:  EGF-VYSGDESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLA--------------SN
         GF + +GD   +RS  VM+RSG GG      SCQDCGNQAKKDC +MRCRTCCKSRGF+C+THVKSTWVPA+KRR+R  +  A                
Subjt:  EGF-VYSGDESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLA--------------SN

Query:  PKRPKDNPAASS-----------GLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQQQ----PPTSASPDA---
         KR +++P+ASS           GLE+G FP +V ++AVF+C++M+++++  DQ AYQ AV+IGGH+FKGILYD G E Q          TS+   A   
Subjt:  PKRPKDNPAASS-----------GLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQQQ----PPTSASPDA---

Query:  ------SALLIT---------TAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS
              SA + T         TA   +    P  +P PLST++  GTQFF P  S
Subjt:  ------SALLIT---------TAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS

Q9FXH7 Protein SHI RELATED SEQUENCE 76.0e-4040Show/hide
Query:  DESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN---------------
        D  P RSS       R G      +CQDCGNQAKKDC +MRCRTCCKSRGF+C+THVKSTWV A+KRR+R  +      KR +D                
Subjt:  DESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN---------------

Query:  ------------------PAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQ-------------------QL
                           A+SSGLE  + P E++S AVFRC+R++++D+ +++YAYQTAV+IGGH+FKGILYD GP                      L
Subjt:  ------------------PAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQ-------------------QL

Query:  QQQPPTSASPDASALLITTAESAALLDPPPQY---PTPLSTYIATGTQFF
            P++A+ +A   + T   S   +DP   Y    TP + ++A GT FF
Subjt:  QQQPPTSASPDASALLITTAESAALLDPPPQY---PTPLSTYIATGTQFF

Q9LQZ5 Protein SHI RELATED SEQUENCE 51.9e-4639.94Show/hide
Query:  MAGFFPLGGAGSSGRGS---------NYHLPTTTTSITTSGGEIIHPNEGL-FWYKNYERLETWEEQQQPQEQGGE-------GFVYSGDES-----PAR
        MAGFF LGG  ++   +         ++H    +  +     EI + N+G   W   Y + +  ++QQQ Q+           G V SG  S      +R
Subjt:  MAGFFPLGGAGSSGRGS---------NYHLPTTTTSITTSGGEIIHPNEGL-FWYKNYERLETWEEQQQPQEQGGE-------GFVYSGDES-----PAR

Query:  SSLVMVRSGRGGGGGHVT-----SCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLAS------------NPKRPKD-----
        S    V S    GG  VT     +CQDCGNQAKKDC +MRCRTCCKSRGF C+THVKSTWVPA+KRR+R L  LAS            N KR ++     
Subjt:  SSLVMVRSGRGGGGGHVT-----SCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLAS------------NPKRPKD-----

Query:  ---------------------NPAASSGLEMG-NFPVEVNSTAVFRCVRMTTLDETNDQ--YAYQTAVNIGGHIFKGILYDHGPEQQ------LQQQPPT
                             N  ++SGLE+  + P EVNS A+FRCVR+++++E  D   YAYQTAVNIGGHIFKGILYD GPE Q      L     T
Subjt:  ---------------------NPAASSGLEMG-NFPVEVNSTAVFRCVRMTTLDETNDQ--YAYQTAVNIGGHIFKGILYDHGPEQQ------LQQQPPT

Query:  SASPDASALLITTA--ESAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        + + + +A    T    +  +LDP   YP  L+++IA GT FF PP S
Subjt:  SASPDASALLITTA--ESAALLDPPPQYPTPLSTYIATGTQFFLPPTS

Q9SD40 Protein SHI RELATED SEQUENCE 15.8e-5138.54Show/hide
Query:  MAGFFPL--GGAGSSGRGSN--------------------YHLPTTTTSITTSGGEIIHPNEG-----LFWYKNYERLETWEEQQQPQEQ-------GGE
        MAGFF L  GG G  G G+N                    Y  P    +  T+       +       L  ++N+ + E   + QQ Q++        G 
Subjt:  MAGFFPL--GGAGSSGRGSN--------------------YHLPTTTTSITTSGGEIIHPNEG-----LFWYKNYERLETWEEQQQPQEQ-------GGE

Query:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLA------
        G        F  SG+ S A     ++++M+RSG  GGG    SCQDCGNQAKKDC +MRCRTCCKSRGFEC THV+STWVPA+KRR+R  +         
Subjt:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLA------

Query:  -----SNPKRPKDN-PAAS-----------SGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGP---------------
             S PKR ++N PA S           SGLE+GNFP EV+S+AVFRCVR++++++  +++AYQTAV+IGGHIFKGILYD GP               
Subjt:  -----SNPKRPKDN-PAAS-----------SGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGP---------------

Query:  -------EQQLQ--------QQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS
                QQL             +S++P+   +  ++A +A  +DP   YPTP++T++A GTQFF  P S
Subjt:  -------EQQLQ--------QQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS

Q9XGX0 Protein SHORT INTERNODES4.6e-4841.27Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGE----IIHPN---EGLFWYKNYE-RLETWE---------EQQQPQEQGGEGFVYSG--DESPARSSL
        MAGFF LG  G      N+   T T + ++SG E      +PN   +G     +Y+  LE W+         +QQQ Q+Q  + +  +      P+  SL
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGE----IIHPN---EGLFWYKNYE-RLETWE---------EQQQPQEQGGEGFVYSG--DESPARSSL

Query:  V--------MVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCL---------ASNPKRPKDN-PAAS--
        +        M+RSG G GG    SCQDCGNQ+KKDC +MRCRTCCKSRG +C THVKSTWVPA+KRR+R  +            S PKR ++  PA S  
Subjt:  V--------MVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCL---------ASNPKRPKDN-PAAS--

Query:  -----------SGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQ----QQP---------PTSASPDASALL-
                   SGLE+GNFP EV+S+AVFRCVR++++D+  ++YAY+TAV+IGGH+FKG+LYD GP ++       QP          +S+SP+ S    
Subjt:  -----------SGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQ----QQP---------PTSASPDASALL-

Query:  ITTAESAALLDPPP-QYPTPLSTYIATGTQFF
        +  + S   +DP    YPTP++T++ TGT FF
Subjt:  ITTAESAALLDPPP-QYPTPLSTYIATGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G19790.1 SHI-related sequence 74.2e-4140Show/hide
Query:  DESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN---------------
        D  P RSS       R G      +CQDCGNQAKKDC +MRCRTCCKSRGF+C+THVKSTWV A+KRR+R  +      KR +D                
Subjt:  DESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN---------------

Query:  ------------------PAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQ-------------------QL
                           A+SSGLE  + P E++S AVFRC+R++++D+ +++YAYQTAV+IGGH+FKGILYD GP                      L
Subjt:  ------------------PAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQ-------------------QL

Query:  QQQPPTSASPDASALLITTAESAALLDPPPQY---PTPLSTYIATGTQFF
            P++A+ +A   + T   S   +DP   Y    TP + ++A GT FF
Subjt:  QQQPPTSASPDASALLITTAESAALLDPPPQY---PTPLSTYIATGTQFF

AT1G19790.2 SHI-related sequence 74.2e-4140Show/hide
Query:  DESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN---------------
        D  P RSS       R G      +CQDCGNQAKKDC +MRCRTCCKSRGF+C+THVKSTWV A+KRR+R  +      KR +D                
Subjt:  DESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDN---------------

Query:  ------------------PAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQ-------------------QL
                           A+SSGLE  + P E++S AVFRC+R++++D+ +++YAYQTAV+IGGH+FKGILYD GP                      L
Subjt:  ------------------PAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQ-------------------QL

Query:  QQQPPTSASPDASALLITTAESAALLDPPPQY---PTPLSTYIATGTQFF
            P++A+ +A   + T   S   +DP   Y    TP + ++A GT FF
Subjt:  QQQPPTSASPDASALLITTAESAALLDPPPQY---PTPLSTYIATGTQFF

AT1G75520.1 SHI-related sequence 51.4e-4739.94Show/hide
Query:  MAGFFPLGGAGSSGRGS---------NYHLPTTTTSITTSGGEIIHPNEGL-FWYKNYERLETWEEQQQPQEQGGE-------GFVYSGDES-----PAR
        MAGFF LGG  ++   +         ++H    +  +     EI + N+G   W   Y + +  ++QQQ Q+           G V SG  S      +R
Subjt:  MAGFFPLGGAGSSGRGS---------NYHLPTTTTSITTSGGEIIHPNEGL-FWYKNYERLETWEEQQQPQEQGGE-------GFVYSGDES-----PAR

Query:  SSLVMVRSGRGGGGGHVT-----SCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLAS------------NPKRPKD-----
        S    V S    GG  VT     +CQDCGNQAKKDC +MRCRTCCKSRGF C+THVKSTWVPA+KRR+R L  LAS            N KR ++     
Subjt:  SSLVMVRSGRGGGGGHVT-----SCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLAS------------NPKRPKD-----

Query:  ---------------------NPAASSGLEMG-NFPVEVNSTAVFRCVRMTTLDETNDQ--YAYQTAVNIGGHIFKGILYDHGPEQQ------LQQQPPT
                             N  ++SGLE+  + P EVNS A+FRCVR+++++E  D   YAYQTAVNIGGHIFKGILYD GPE Q      L     T
Subjt:  ---------------------NPAASSGLEMG-NFPVEVNSTAVFRCVRMTTLDETNDQ--YAYQTAVNIGGHIFKGILYDHGPEQQ------LQQQPPT

Query:  SASPDASALLITTA--ESAALLDPPPQYPTPLSTYIATGTQFFLPPTS
        + + + +A    T    +  +LDP   YP  L+++IA GT FF PP S
Subjt:  SASPDASALLITTA--ESAALLDPPPQYPTPLSTYIATGTQFFLPPTS

AT3G51060.1 Lateral root primordium (LRP) protein-related4.1e-5238.54Show/hide
Query:  MAGFFPL--GGAGSSGRGSN--------------------YHLPTTTTSITTSGGEIIHPNEG-----LFWYKNYERLETWEEQQQPQEQ-------GGE
        MAGFF L  GG G  G G+N                    Y  P    +  T+       +       L  ++N+ + E   + QQ Q++        G 
Subjt:  MAGFFPL--GGAGSSGRGSN--------------------YHLPTTTTSITTSGGEIIHPNEG-----LFWYKNYERLETWEEQQQPQEQ-------GGE

Query:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLA------
        G        F  SG+ S A     ++++M+RSG  GGG    SCQDCGNQAKKDC +MRCRTCCKSRGFEC THV+STWVPA+KRR+R  +         
Subjt:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLA------

Query:  -----SNPKRPKDN-PAAS-----------SGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGP---------------
             S PKR ++N PA S           SGLE+GNFP EV+S+AVFRCVR++++++  +++AYQTAV+IGGHIFKGILYD GP               
Subjt:  -----SNPKRPKDN-PAAS-----------SGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGP---------------

Query:  -------EQQLQ--------QQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS
                QQL             +S++P+   +  ++A +A  +DP   YPTP++T++A GTQFF  P S
Subjt:  -------EQQLQ--------QQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS

AT5G66350.1 Lateral root primordium (LRP) protein-related3.2e-4941.27Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGE----IIHPN---EGLFWYKNYE-RLETWE---------EQQQPQEQGGEGFVYSG--DESPARSSL
        MAGFF LG  G      N+   T T + ++SG E      +PN   +G     +Y+  LE W+         +QQQ Q+Q  + +  +      P+  SL
Subjt:  MAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGE----IIHPN---EGLFWYKNYE-RLETWE---------EQQQPQEQGGEGFVYSG--DESPARSSL

Query:  V--------MVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCL---------ASNPKRPKDN-PAAS--
        +        M+RSG G GG    SCQDCGNQ+KKDC +MRCRTCCKSRG +C THVKSTWVPA+KRR+R  +            S PKR ++  PA S  
Subjt:  V--------MVRSGRGGGGGHVTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCL---------ASNPKRPKDN-PAAS--

Query:  -----------SGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQ----QQP---------PTSASPDASALL-
                   SGLE+GNFP EV+S+AVFRCVR++++D+  ++YAY+TAV+IGGH+FKG+LYD GP ++       QP          +S+SP+ S    
Subjt:  -----------SGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQQLQ----QQP---------PTSASPDASALL-

Query:  ITTAESAALLDPPP-QYPTPLSTYIATGTQFF
        +  + S   +DP    YPTP++T++ TGT FF
Subjt:  ITTAESAALLDPPP-QYPTPLSTYIATGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATATGGCCGGTTTTTTCCCACTAGGCGGCGCCGGAAGCAGCGGAAGAGGTTCCAATTATCATCTTCCTACAACTACTACTAGTATCACCACCAGCGGCGGCGA
AATAATTCATCCCAACGAGGGGTTATTTTGGTACAAGAATTATGAGAGACTGGAAACGTGGGAAGAACAACAGCAACCGCAGGAACAAGGGGGAGAAGGATTTGTTTACT
CGGGCGATGAATCGCCGGCTAGATCGTCGTTGGTGATGGTGAGATCGGGAAGAGGCGGCGGTGGAGGGCATGTAACGAGCTGCCAAGACTGTGGAAATCAAGCGAAAAAA
GATTGCGTTTACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACTCACGTTAAAAGCACTTGGGTTCCCGCCTCCAAACGCCGTGACCGCCACCT
CCGTTGCCTCGCCTCTAACCCCAAACGCCCTAAAGACAACCCCGCTGCTTCTTCAGGGTTGGAAATGGGGAATTTTCCGGTGGAAGTAAACTCTACGGCGGTGTTTCGGT
GCGTACGAATGACAACGTTGGACGAAACCAACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATCTTCAAAGGCATTCTTTACGACCACGGCCCTGAA
CAACAACTACAACAACAGCCACCCACCTCCGCCTCCCCTGACGCCTCCGCCCTCCTCATCACCACCGCTGAATCCGCCGCATTGCTCGATCCACCTCCGCAGTACCCCAC
TCCTCTTTCCACCTACATCGCCACCGGTACGCAATTTTTTCTTCCCCCAACATCTTAA
mRNA sequenceShow/hide mRNA sequence
GTGGGAAATCTGTAACACAAAATGGCATAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGAAAAAAAAAAAAGGTAATCAATCA
TCTCTGCAAAACTGCAACAAAATCAGAGCATAGAGAAAAGGAAAGGCCTGAGAGAAGACAGAGAAGAAGAAGAAGAACAACAAATATGAAGAATATGGCCGGTTTTTTCC
CACTAGGCGGCGCCGGAAGCAGCGGAAGAGGTTCCAATTATCATCTTCCTACAACTACTACTAGTATCACCACCAGCGGCGGCGAAATAATTCATCCCAACGAGGGGTTA
TTTTGGTACAAGAATTATGAGAGACTGGAAACGTGGGAAGAACAACAGCAACCGCAGGAACAAGGGGGAGAAGGATTTGTTTACTCGGGCGATGAATCGCCGGCTAGATC
GTCGTTGGTGATGGTGAGATCGGGAAGAGGCGGCGGTGGAGGGCATGTAACGAGCTGCCAAGACTGTGGAAATCAAGCGAAAAAAGATTGCGTTTACATGCGATGTAGAA
CTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACTCACGTTAAAAGCACTTGGGTTCCCGCCTCCAAACGCCGTGACCGCCACCTCCGTTGCCTCGCCTCTAACCCCAAA
CGCCCTAAAGACAACCCCGCTGCTTCTTCAGGGTTGGAAATGGGGAATTTTCCGGTGGAAGTAAACTCTACGGCGGTGTTTCGGTGCGTACGAATGACAACGTTGGACGA
AACCAACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATCTTCAAAGGCATTCTTTACGACCACGGCCCTGAACAACAACTACAACAACAGCCACCCA
CCTCCGCCTCCCCTGACGCCTCCGCCCTCCTCATCACCACCGCTGAATCCGCCGCATTGCTCGATCCACCTCCGCAGTACCCCACTCCTCTTTCCACCTACATCGCCACC
GGTACGCAATTTTTTCTTCCCCCAACATCTTAATAGGTGAAATTGAAATGAAGGAA
Protein sequenceShow/hide protein sequence
MKNMAGFFPLGGAGSSGRGSNYHLPTTTTSITTSGGEIIHPNEGLFWYKNYERLETWEEQQQPQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCQDCGNQAKK
DCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKDNPAASSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPE
QQLQQQPPTSASPDASALLITTAESAALLDPPPQYPTPLSTYIATGTQFFLPPTS