; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G08690 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G08690
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPMD domain-containing protein
Genome locationClcChr07:22783980..22790059
RNA-Seq ExpressionClc07G08690
SyntenyClc07G08690
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033822.1 uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa]3.6e-3869.3Show/hide
Query:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT
        + +E K+ TYLA FLSCWLCVFVFPDKQ  +R E FK ASLMAEGY FSL + VLANIYS LR IH+ S S+G+SNACFP+HY+H WLALYFN HY+ PT
Subjt:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT

Query:  NVRGQLMVGFSGEG
        ++RG  MV FSGEG
Subjt:  NVRGQLMVGFSGEG

KAA0048575.1 uncharacterized protein E6C27_scaffold61G002130 [Cucumis melo var. makuwa]1.3e-4066.94Show/hide
Query:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT
        +V+E K+ TYLATFLS WLCVFVFPDKQ ++  EVF+ ASLM EGY FSL V VL NIYSGLR IH+ + S+G+SNACFPLHY+H WLA+YFN HY+  T
Subjt:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT

Query:  NVRGQLMVGFSGEGAAKYYTNFEA
        ++R   MV FSGEG  KYYTN EA
Subjt:  NVRGQLMVGFSGEGAAKYYTNFEA

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]2.2e-4370.16Show/hide
Query:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT
        +V+E K+ TYLA FLSCWLCVFVFPDKQ   R EVFK ASLMAEGY FSL + VLANIYSGL  IH+ + S+G+SN CFP+HY+HGWLALYFN HY+  T
Subjt:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT

Query:  NVRGQLMVGFSGEGAAKYYTNFEA
        ++RG  MV FSGEG AKYYTN EA
Subjt:  NVRGQLMVGFSGEGAAKYYTNFEA

KAA0062705.1 uncharacterized protein E6C27_scaffold382G00250 [Cucumis melo var. makuwa]2.7e-4966.9Show/hide
Query:  GVPIRRPDWSKDELDLFRALNIVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACF
        G PI+R DWS+ EL+LF  L +V+E K+ TYLAT LSCWLCVFVFPDKQ  +R EVFK ASLMAEGY FSL + VL+NIYS L  IH+ + S+G+SNACF
Subjt:  GVPIRRPDWSKDELDLFRALNIVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACF

Query:  PLHYIHGWLALYFNMHYRVPTNVRGQLMVGFSGEGAAKYYTNFEA
        P+HY+H WL LYFN HY+ PT++RG  MV FSGEG AKYYTN EA
Subjt:  PLHYIHGWLALYFNMHYRVPTNVRGQLMVGFSGEGAAKYYTNFEA

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]3.6e-5471.03Show/hide
Query:  GVPIRRPDWSKDELDLFRALNIVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACF
        G+PIRRPDWSK EL +F  L++ D+ ++ TYLA FLSCWLCVFVFPDKQ  +R EVFK ASLMAEGY FSL V VLANIYSGLR +H+ + S+GYSNACF
Subjt:  GVPIRRPDWSKDELDLFRALNIVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACF

Query:  PLHYIHGWLALYFNMHYRVPTNVRGQLMVGFSGEGAAKYYTNFEA
        PLHY+HGWLALYFN HY+ P ++RG  MV FSGEG AKYYTN EA
Subjt:  PLHYIHGWLALYFNMHYRVPTNVRGQLMVGFSGEGAAKYYTNFEA

TrEMBL top hitse value%identityAlignment
A0A5A7SRI5 Uncharacterized protein1.7e-3869.3Show/hide
Query:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT
        + +E K+ TYLA FLSCWLCVFVFPDKQ  +R E FK ASLMAEGY FSL + VLANIYS LR IH+ S S+G+SNACFP+HY+H WLALYFN HY+ PT
Subjt:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT

Query:  NVRGQLMVGFSGEG
        ++RG  MV FSGEG
Subjt:  NVRGQLMVGFSGEG

A0A5A7U4C3 Uncharacterized protein1.1e-4370.16Show/hide
Query:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT
        +V+E K+ TYLA FLSCWLCVFVFPDKQ   R EVFK ASLMAEGY FSL + VLANIYSGL  IH+ + S+G+SN CFP+HY+HGWLALYFN HY+  T
Subjt:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT

Query:  NVRGQLMVGFSGEGAAKYYTNFEA
        ++RG  MV FSGEG AKYYTN EA
Subjt:  NVRGQLMVGFSGEGAAKYYTNFEA

A0A5A7U4M3 Uncharacterized protein6.4e-4166.94Show/hide
Query:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT
        +V+E K+ TYLATFLS WLCVFVFPDKQ ++  EVF+ ASLM EGY FSL V VL NIYSGLR IH+ + S+G+SNACFPLHY+H WLA+YFN HY+  T
Subjt:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT

Query:  NVRGQLMVGFSGEGAAKYYTNFEA
        ++R   MV FSGEG  KYYTN EA
Subjt:  NVRGQLMVGFSGEGAAKYYTNFEA

A0A5D3DAL3 PMD domain-containing protein1.3e-4966.9Show/hide
Query:  GVPIRRPDWSKDELDLFRALNIVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACF
        G PI+R DWS+ EL+LF  L +V+E K+ TYLAT LSCWLCVFVFPDKQ  +R EVFK ASLMAEGY FSL + VL+NIYS L  IH+ + S+G+SNACF
Subjt:  GVPIRRPDWSKDELDLFRALNIVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACF

Query:  PLHYIHGWLALYFNMHYRVPTNVRGQLMVGFSGEGAAKYYTNFEA
        P+HY+H WL LYFN HY+ PT++RG  MV FSGEG AKYYTN EA
Subjt:  PLHYIHGWLALYFNMHYRVPTNVRGQLMVGFSGEGAAKYYTNFEA

A0A5D3DEA3 Uncharacterized protein1.7e-3869.3Show/hide
Query:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT
        + +E K+ TYLA FLSCWLCVFVFPDKQ  +R E FK ASLMAEGY FSL + VLANIYS LR IH+ S S+G+SNACFP+HY+H WLALYFN HY+ PT
Subjt:  IVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSVLANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPT

Query:  NVRGQLMVGFSGEG
        ++RG  MV FSGEG
Subjt:  NVRGQLMVGFSGEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTCAAGGAAGAAGTCCGGAGAGAAAAAGAGAAGAAGGCAACAAGGACGTCTGCAGTAGGAGTATGCGGCCAAGAAAGAAGGGCAGGGTTGCGTTCAACCGAGCT
GACAGAGGAAAATGGAGCCTTGCGTTCCAGAGTTAGAACGCTGCGTTCAGAAAGCTCGGGAAGAGGAAAAGAGGAAAGGAAAAAGAAGTATTCTTTGGCAAGTACAGGTA
GCATGACAGTTCCCGTTGCTGATCGAAGTCGAGGAGTGGTCGTCAGTCTTGCCAAAAATGATCTGACTCCTGCTAGGTGTGACCCCTATATGGGTGACTGTGTAGTCTGC
AGGATTGATCATGCTAGGCATGACCCCTGGGTTGTCGCCAGCCTTGCCAACAACAATCTGACTCCTGCTAGGCACGACCCTTATGTAGGTGACTGTGTAGTCTATGGAGT
TCCCATTCGTCGTCCTGACTGGTCCAAGGATGAACTTGATTTGTTTCGTGCGCTGAATATTGTGGATGAATTAAAAAATATGACTTATTTGGCCACTTTTCTTTCCTGCT
GGCTGTGCGTGTTCGTGTTTCCTGACAAACAAACTTATGTTCGTCAGGAGGTCTTTAAGGCAGCTAGTCTTATGGCTGAAGGCTATATTTTTAGCCTTGTTGTTTCTGTC
TTGGCTAATATTTACAGTGGGTTGCGCCATATTCACAATGTTTCTCTTTCTGTTGGTTATTCAAATGCATGCTTTCCCTTGCATTATATTCATGGATGGCTTGCCCTTTA
TTTCAATATGCATTATAGAGTTCCAACGAATGTTAGGGGACAACTGATGGTTGGATTTTCTGGCGAAGGTGCAGCCAAGTATTATACTAATTTTGAAGCATCGTGTACAC
ATTCTCAAAGCCCTAGCGCTGCGGCGCTATGGGACAGCGCCGTGGCGCCAGCTTTCCTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTCAAGGAAGAAGTCCGGAGAGAAAAAGAGAAGAAGGCAACAAGGACGTCTGCAGTAGGAGTATGCGGCCAAGAAAGAAGGGCAGGGTTGCGTTCAACCGAGCT
GACAGAGGAAAATGGAGCCTTGCGTTCCAGAGTTAGAACGCTGCGTTCAGAAAGCTCGGGAAGAGGAAAAGAGGAAAGGAAAAAGAAGTATTCTTTGGCAAGTACAGGTA
GCATGACAGTTCCCGTTGCTGATCGAAGTCGAGGAGTGGTCGTCAGTCTTGCCAAAAATGATCTGACTCCTGCTAGGTGTGACCCCTATATGGGTGACTGTGTAGTCTGC
AGGATTGATCATGCTAGGCATGACCCCTGGGTTGTCGCCAGCCTTGCCAACAACAATCTGACTCCTGCTAGGCACGACCCTTATGTAGGTGACTGTGTAGTCTATGGAGT
TCCCATTCGTCGTCCTGACTGGTCCAAGGATGAACTTGATTTGTTTCGTGCGCTGAATATTGTGGATGAATTAAAAAATATGACTTATTTGGCCACTTTTCTTTCCTGCT
GGCTGTGCGTGTTCGTGTTTCCTGACAAACAAACTTATGTTCGTCAGGAGGTCTTTAAGGCAGCTAGTCTTATGGCTGAAGGCTATATTTTTAGCCTTGTTGTTTCTGTC
TTGGCTAATATTTACAGTGGGTTGCGCCATATTCACAATGTTTCTCTTTCTGTTGGTTATTCAAATGCATGCTTTCCCTTGCATTATATTCATGGATGGCTTGCCCTTTA
TTTCAATATGCATTATAGAGTTCCAACGAATGTTAGGGGACAACTGATGGTTGGATTTTCTGGCGAAGGTGCAGCCAAGTATTATACTAATTTTGAAGCATCGTGTACAC
ATTCTCAAAGCCCTAGCGCTGCGGCGCTATGGGACAGCGCCGTGGCGCCAGCTTTCCTTAAATGA
Protein sequenceShow/hide protein sequence
MTLKEEVRREKEKKATRTSAVGVCGQERRAGLRSTELTEENGALRSRVRTLRSESSGRGKEERKKKYSLASTGSMTVPVADRSRGVVVSLAKNDLTPARCDPYMGDCVVC
RIDHARHDPWVVASLANNNLTPARHDPYVGDCVVYGVPIRRPDWSKDELDLFRALNIVDELKNMTYLATFLSCWLCVFVFPDKQTYVRQEVFKAASLMAEGYIFSLVVSV
LANIYSGLRHIHNVSLSVGYSNACFPLHYIHGWLALYFNMHYRVPTNVRGQLMVGFSGEGAAKYYTNFEASCTHSQSPSAAALWDSAVAPAFLK