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Clc07G09130 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G09130
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHeavy metal transport/detoxification superfamily protein
Genome locationClcChr07:23514562..23517993
RNA-Seq ExpressionClc07G09130
SyntenyClc07G09130
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574268.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]3.7e-4172.44Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT
        + N+QIVP  + ++VEPQLVE+MVPLYSHGCANKIHKALSHLKGIYSV+VDY EQKV VWGICNK+QVLSTVRSKRKAARFWNNND +E           
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT

Query:  T-TTTRPPSFALNKLRSLSFKLACKKV
            +R PSF +NKLRSLSFKLACKKV
Subjt:  T-TTTRPPSFALNKLRSLSFKLACKKV

KAG7013336.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-4272.22Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT
        + N+QIVP  + ++VEPQLVE+MVPLYSHGCANKIHKALSHLKGIYSV+VDY EQKV VWGICNK+QVLSTVRSKRKAARFWNNND ++           
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT

Query:  TTTTRPPSFALNKLRSLSFKLACKKV
           +R PSF +NKLRSLSFKLACKKV
Subjt:  TTTTRPPSFALNKLRSLSFKLACKKV

XP_022945716.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucurbita moschata]3.1e-4071.43Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT
        + N+QIVP  + ++VEPQLVE+MVPLYSHGCANKIHKALSHLKGIYSV+VDY EQKV VWGICNK+QVLSTVRSKRKAARFWNN+D +            
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT

Query:  TTTTRPPSFALNKLRSLSFKLACKKV
          + R PSF +NKLRSLSFKLACKKV
Subjt:  TTTTRPPSFALNKLRSLSFKLACKKV

XP_022968373.1 heavy metal-associated isoprenylated plant protein 28 [Cucurbita maxima]3.4e-3968.99Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTT---VT
        + N+QIVP  + ++VEPQLVE+MVPLYSHGCANKIHKALSHLKGIYSV+VDY+EQKV VWGICNK+QVLSTVRSKRKAARFWN +D +            
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTT---VT

Query:  TTTTTTTRPPSFALNKLRSLSFKLACKKV
              +R PSF +NKLRSLSFKLACKKV
Subjt:  TTTTTTTRPPSFALNKLRSLSFKLACKKV

XP_023542922.1 heavy metal-associated isoprenylated plant protein 36 [Cucurbita pepo subsp. pepo]1.2e-3970.63Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT
        + N+QIVP  + ++VEPQLVE+MVPLYSHGCANKIHKALSHLKGIYSV+VDY+EQKV VWGICNK+QVLSTVRSKRKAARFWN +D +            
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT

Query:  TTTTRPPSFALNKLRSLSFKLACKKV
          + R PSF +NKLRSLSFKLACKKV
Subjt:  TTTTRPPSFALNKLRSLSFKLACKKV

TrEMBL top hitse value%identityAlignment
A0A3Q7FME6 HMA domain-containing protein3.9e-2853.33Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNND-----QEETTTPTT
        + NMQIVP     NVEPQ VE+MVPLYS+GC  KI+ ALSH+KGIYSV+VD+ +QKV +WGICNK+ VL+ VRSKRKAARFWN  D     + ++++ + 
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNND-----QEETTTPTT

Query:  VTTTTTTTTRPPSFALNKLRSLSFKLACKKVSLRA
          +      R    AL + RSLS KLA KK   R+
Subjt:  VTTTTTTTTRPPSFALNKLRSLSFKLACKKVSLRA

A0A6J1CHX5 uncharacterized protein LOC1110116619.5e-3561.9Show/hide
Query:  MGIGNMQIVPGESR--YNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNN-NDQEETTTPTT
        M +  + IVP ++R  YNVEPQLVE+MVPLYSHGCANK+HKALSHLKGIYSV+VD N+QKV VWGICNK+QVLSTVRSKRKAARFWN+  +QE   +   
Subjt:  MGIGNMQIVPGESR--YNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNN-NDQEETTTPTT

Query:  VTTTTTTTTRPPSFALNKLRSLSFKLACKKVSLRAMVRQLHDNLTTP
        V       +  P FA   +RSLS KLACKKV           NLTTP
Subjt:  VTTTTTTTTRPPSFALNKLRSLSFKLACKKVSLRAMVRQLHDNLTTP

A0A6J1G1N8 protein SODIUM POTASSIUM ROOT DEFECTIVE 21.5e-4071.43Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT
        + N+QIVP  + ++VEPQLVE+MVPLYSHGCANKIHKALSHLKGIYSV+VDY EQKV VWGICNK+QVLSTVRSKRKAARFWNN+D +            
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT

Query:  TTTTRPPSFALNKLRSLSFKLACKKV
          + R PSF +NKLRSLSFKLACKKV
Subjt:  TTTTRPPSFALNKLRSLSFKLACKKV

A0A6J1HXU2 heavy metal-associated isoprenylated plant protein 281.7e-3968.99Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTT---VT
        + N+QIVP  + ++VEPQLVE+MVPLYSHGCANKIHKALSHLKGIYSV+VDY+EQKV VWGICNK+QVLSTVRSKRKAARFWN +D +            
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTT---VT

Query:  TTTTTTTRPPSFALNKLRSLSFKLACKKV
              +R PSF +NKLRSLSFKLACKKV
Subjt:  TTTTTTTRPPSFALNKLRSLSFKLACKKV

M0ZIL1 HMA domain-containing protein7.5e-3260.77Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT
        + NMQIVP     NVEPQ VE+MVPLYS+GC  KI+ ALSH+KGIYSV+VD+ +QKV VWGICNK+ VL+TVRSKRKAARFWN  D  E  + T  + T 
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWNNNDQEETTTPTTVTTTT

Query:  TTTTRPPSFALNKLRSLSFKLACKKVSLRA
            RPP  AL + RSLS+KLA KK   R+
Subjt:  TTTTRPPSFALNKLRSLSFKLACKKVSLRA

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 459.5e-0834.21Show/hide
Query:  VPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW
        + G SR  +   +VEL+V +   GC  K+ +A+S L G+ +V +D + QKV V G  ++ +VL  V+   + A +W
Subjt:  VPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW

F4IC29 Heavy metal-associated isoprenylated plant protein 281.7e-0430.88Show/hide
Query:  VEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW
        ++ Q +E+ V +   GC +++  AL  ++G+ +V +D  +QKV V G  ++ +VL  VR   + A  W
Subjt:  VEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW

F4JMB8 Heavy metal-associated isoprenylated plant protein 442.9e-0440.62Show/hide
Query:  QLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARF
        Q VEL V +   GC   +  A+S L+G+ SV VD    +VRV G  ++++VL  VR   K A F
Subjt:  QLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARF

O65657 Heavy metal-associated isoprenylated plant protein 234.4e-0535.14Show/hide
Query:  GESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW
        G+ +   + Q VEL V +   GC  KI  +LS LKG+ +V ++  +QKV V G  +  +VL   ++  K A  W
Subjt:  GESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 16.8e-0644.62Show/hide
Query:  QLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW
        Q+V L V L+  GCA K+ K LS LKG+ S ++D+  +KV V G      VL+++ SK K A+FW
Subjt:  QLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW

Arabidopsis top hitse value%identityAlignment
AT3G56891.1 Heavy metal transport/detoxification superfamily protein6.8e-0934.21Show/hide
Query:  VPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW
        + G SR  +   +VEL+V +   GC  K+ +A+S L G+ +V +D + QKV V G  ++ +VL  V+   + A +W
Subjt:  VPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW

AT4G27590.1 Heavy metal transport/detoxification superfamily protein9.7e-2446.79Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWN-----NND---------
        +G++QIVP  ++  VE Q VE+MVPLYS+GC  K+ +ALSHLKGIYSV VDY  QKV VWGICNK  VL+ V+ KRK ARFWN     NN+         
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWN-----NND---------

Query:  -QEETTTPTTVTTTT-----TTTTRPPSFA----LNKLRSLSFK-LACKKVSLRAM
         +E+T   T+  T       T +T PP F+    ++ +R+ SF   A KKV  R++
Subjt:  -QEETTTPTTVTTTT-----TTTTRPPSFA----LNKLRSLSFK-LACKKVSLRAM

AT4G27590.2 Heavy metal transport/detoxification superfamily protein1.3e-2345.62Show/hide
Query:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWN-----NND---------
        +G++QIVP  ++  VE Q VE+MVPLYS+GC  K+ +ALSHLKGIYSV VDY  QKV VWGICNK  VL+ V+ KRK ARFWN     NN+         
Subjt:  IGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFWN-----NND---------

Query:  -QEETTTPTTVTTTT-----TTTTRPPSFA----LNKLRSLSFK-LACKKVSLRAMVRQL
         +E+T   T+  T       T +T PP F+    ++ +R+ SF   A KK +   +VR++
Subjt:  -QEETTTPTTVTTTT-----TTTTRPPSFA----LNKLRSLSFK-LACKKVSLRAMVRQL

AT5G02600.1 Heavy metal transport/detoxification superfamily protein4.8e-0744.62Show/hide
Query:  QLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW
        Q+V L V L+  GCA K+ K LS LKG+ S ++D+  +KV V G      VL+++ SK K A+FW
Subjt:  QLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW

AT5G02600.2 Heavy metal transport/detoxification superfamily protein4.8e-0744.62Show/hide
Query:  QLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW
        Q+V L V L+  GCA K+ K LS LKG+ S ++D+  +KV V G      VL+++ SK K A+FW
Subjt:  QLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQVLSTVRSKRKAARFW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATTCATTGGGTTCGTAGGACAAGCTTCGCCTTGTTTAGGAAGCGTCGCGGCGCCAGCGTATTGTTAAAAAATCCTAGCTCTCAGGAAAAAGCACCACAGCGTTG
TGGCTTCAAGGACATGGGGATAGGCAATATGCAAATAGTTCCGGGTGAAAGCAGATATAATGTGGAGCCGCAGTTGGTAGAGCTGATGGTCCCTCTTTATTCTCATGGTT
GCGCCAACAAAATCCACAAGGCTCTGTCCCATCTCAAAGGCATATATTCAGTTCATGTGGATTACAATGAGCAGAAAGTGAGAGTGTGGGGAATATGCAACAAACACCAA
GTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAATAATAATGATCAGGAGGAGACTACTACTCCAACCACAGTGACGACCACCACGACCACGACCAC
ACGGCCGCCTTCTTTTGCTCTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTCAGCCTCAGAGCTATGGTCCGCCAATTACACGATAACCTCACAA
CTCCTCCGCCTCCACCTACTGTCAATGTACAACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAATTCATTGGGTTCGTAGGACAAGCTTCGCCTTGTTTAGGAAGCGTCGCGGCGCCAGCGTATTGTTAAAAAATCCTAGCTCTCAGGAAAAAGCACCACAGCGTTG
TGGCTTCAAGGACATGGGGATAGGCAATATGCAAATAGTTCCGGGTGAAAGCAGATATAATGTGGAGCCGCAGTTGGTAGAGCTGATGGTCCCTCTTTATTCTCATGGTT
GCGCCAACAAAATCCACAAGGCTCTGTCCCATCTCAAAGGCATATATTCAGTTCATGTGGATTACAATGAGCAGAAAGTGAGAGTGTGGGGAATATGCAACAAACACCAA
GTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAATAATAATGATCAGGAGGAGACTACTACTCCAACCACAGTGACGACCACCACGACCACGACCAC
ACGGCCGCCTTCTTTTGCTCTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTCAGCCTCAGAGCTATGGTCCGCCAATTACACGATAACCTCACAA
CTCCTCCGCCTCCACCTACTGTCAATGTACAACAGTAA
Protein sequenceShow/hide protein sequence
MRIHWVRRTSFALFRKRRGASVLLKNPSSQEKAPQRCGFKDMGIGNMQIVPGESRYNVEPQLVELMVPLYSHGCANKIHKALSHLKGIYSVHVDYNEQKVRVWGICNKHQ
VLSTVRSKRKAARFWNNNDQEETTTPTTVTTTTTTTTRPPSFALNKLRSLSFKLACKKVSLRAMVRQLHDNLTTPPPPPTVNVQQ