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Clc07G09180 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G09180
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:23577453..23578077
RNA-Seq ExpressionClc07G09180
SyntenyClc07G09180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB77727.1 hypothetical protein [Arabidopsis thaliana]4.1e-0436.78Show/hide
Query:  MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRR
        ++A++L   S+E K++   K   P N+++K+ L+RNR+   + ++T S   + +T  QSI TT PV NA+  A+RIRP+  +  R R
Subjt:  MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRR
KAE8009176.1 hypothetical protein FH972_005627 [Carpinus fangiana]1.4e-0442.11Show/hide
Query:  MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRR--TAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPAD
        M  +E    SE+ KQDG ++ D+P ++ +KEGL R+R R  TA  DL   H+GD   G   +GT TPVG+ ++  D
Subjt:  MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRR--TAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPAD
KAG5405213.1 hypothetical protein IGI04_011332 [Brassica rapa subsp. trilocularis]1.1e-0442.31Show/hide
Query:  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRR
        SEE+K+D   K   P N+ +K+ L+RNR+  A+ ++T S   D +   QSI TT PV NA+  A+RI PK  +  R R
Subjt:  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRR
RWV97411.1 hypothetical protein GW17_00039805 [Ensete ventricosum]3.1e-0432.2Show/hide
Query:  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRREGQRTEIYIAVVIGGFRRQADG
        S+E+ ++G ++D++P +M E+EGLA +    AVADL    + D D G + +    PV +A++ AD +RP+A D  R              +G    + DG
Subjt:  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRREGQRTEIYIAVVIGGFRRQADG

Query:  VG---NILRSDCKDEDEK
        VG    +L +   DE+ K
Subjt:  VG---NILRSDCKDEDEK
TrEMBL top hitse value%identityAlignment
A0A444DH12 Uncharacterized protein1.5e-0432.2Show/hide
Query:  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRREGQRTEIYIAVVIGGFRRQADG
        S+E+ ++G ++D++P +M E+EGLA +    AVADL    + D D G + +    PV +A++ AD +RP+A D  R              +G    + DG
Subjt:  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRREGQRTEIYIAVVIGGFRRQADG

Query:  VG---NILRSDCKDEDEK
        VG    +L +   DE+ K
Subjt:  VG---NILRSDCKDEDEK
A0A5N6QQT6 Uncharacterized protein6.7e-0542.11Show/hide
Query:  MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRR--TAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPAD
        M  +E    SE+ KQDG ++ D+P ++ +KEGL R+R R  TA  DL   H+GD   G   +GT TPVG+ ++  D
Subjt:  MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRR--TAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPAD
A0A7C9E008 Uncharacterized protein1.4e-0539.24Show/hide
Query:  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRRE
        S+E+K D  S+ ++P N+ +K+GL RNR R A+ +L ++ + D  +G   +GT+ PVG+A+    R+  +A DGAR  E
Subjt:  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRRE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAAAGGAATTGGCGGAAGATTCAGAAGAGTCCAAACAAGACGGAAACTCCAAGGATGATCAACCACAAAATATGCACGAGAAGGAGGGCCTGGCCAGGAATAG
GCGCAGAACCGCCGTTGCCGACCTCACAAAATCCCATGTTGGCGACCTTGACACCGGAACACAGAGCATCGGCACAACCACACCAGTAGGTAACGCCATCAACCCCGCAG
ACCGGATCCGTCCTAAAGCATTTGACGGGGCAAGAAGAAGGGAGGGACAGAGGACAGAGATCTACATCGCCGTCGTTATTGGTGGCTTCAGAAGGCAAGCGGATGGCGTA
GGAAACATCCTCCGATCGGACTGTAAAGACGAAGATGAGAAGCGAAAAGAAGAAAATGATGGAAATCGGGGGTGTAGAGAAGAGGATCATGTTCGGCGGGCTTTGAAAGC
TTGCGTTATTGGAGCTAGATTTAGGGCAGGAAGGGGGAGAGAGACCTCTGTCATGGAATTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCAAAGGAATTGGCGGAAGATTCAGAAGAGTCCAAACAAGACGGAAACTCCAAGGATGATCAACCACAAAATATGCACGAGAAGGAGGGCCTGGCCAGGAATAG
GCGCAGAACCGCCGTTGCCGACCTCACAAAATCCCATGTTGGCGACCTTGACACCGGAACACAGAGCATCGGCACAACCACACCAGTAGGTAACGCCATCAACCCCGCAG
ACCGGATCCGTCCTAAAGCATTTGACGGGGCAAGAAGAAGGGAGGGACAGAGGACAGAGATCTACATCGCCGTCGTTATTGGTGGCTTCAGAAGGCAAGCGGATGGCGTA
GGAAACATCCTCCGATCGGACTGTAAAGACGAAGATGAGAAGCGAAAAGAAGAAAATGATGGAAATCGGGGGTGTAGAGAAGAGGATCATGTTCGGCGGGCTTTGAAAGC
TTGCGTTATTGGAGCTAGATTTAGGGCAGGAAGGGGGAGAGAGACCTCTGTCATGGAATTTTCTTGA
Protein sequenceShow/hide protein sequence
MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRREGQRTEIYIAVVIGGFRRQADGV
GNILRSDCKDEDEKRKEENDGNRGCREEDHVRRALKACVIGARFRAGRGRETSVMEFS