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Clc07G09270 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G09270
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationClcChr07:23639205..23645035
RNA-Seq ExpressionClc07G09270
SyntenyClc07G09270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038880424.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Benincasa hispida]5.3e-0753.97Show/hide
Query:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLM
        +++YG+ YRAREY  VYARG  PE  Y +V AYGE LKLAN  +IFEVE+E        FM +
Subjt:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLM
XP_038884809.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Benincasa hispida]4.9e-0550.79Show/hide
Query:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLM
        +++YGRAY  +EY  +Y RG  PE  Y IV AY E LKLAN  +IFEVE+E V      FM +
Subjt:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLM
XP_038896643.1 uncharacterized protein LOC120084906 [Benincasa hispida]5.8e-0665.96Show/hide
Query:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFE
        ++SYG+AYRA+EY  VYARG SPE  + IV AYGETLK  NP +IFE
Subjt:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFE
XP_038902318.1 uncharacterized protein LOC120088954 [Benincasa hispida]2.2e-0547.62Show/hide
Query:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLM
        ++SY +A+RARE  +  ARG +PEE YV+++AYGE LK+ NP + FE+E+E    L   FM +
Subjt:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLM
XP_038904293.1 uncharacterized protein LOC120090647 [Benincasa hispida]4.9e-0550.79Show/hide
Query:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLM
        ++SY +AY  REY   +ARG  P+  Y I  AYGETLKLANP  IFEVEI+        FM +
Subjt:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLM
TrEMBL top hitse value%identityAlignment
A0A6J1DE35 protein FAR-RED ELONGATED HYPOCOTYL 3-like2.6e-0443.08Show/hide
Query:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLMPM
        ++SY +A+RARE  +   RG  PE+ Y+ ++AYGE +K+ NP +IF +E EG  SL  ++M M +
Subjt:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLMPM
A0A6J1DZQ9 uncharacterized protein LOC1110245932.6e-0441.54Show/hide
Query:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLMPM
        ++SY +A+RARE      RG  PE+ Y+ ++AY E +K+ NPC+IF +E EG  SL  +++ M +
Subjt:  HVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLMPM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGTTCGTATTAGCCAAGGGATATAATGCAAGACATTCGACGGGACTATGGGCTCATGTAAGCTATGGACGGGCTTACCGTGCTAGAGAGTATGTATTTGTATA
TGCAAGAGGTTTCTCACCTGAAGAATTGTATGTCATTGTTAATGCATATGGTGAGACACTGAAGCTTGCAAACCCATGTTCCATCTTTGAGGTTGAGATAGAAGGCGTAT
CGTCACTTACTCTTGAGTTTATGCTAATGCCCATGGTTACTTATCGACTGGATTATGGTTATTGTATGGACCGGATTACTATATTGGCTGGTTATGATTATTGTGTCCAC
TGGTGTCCCCTCAGGATCACCACCTACGTTTATGTTCATGACTGTGACCTGTGTGCCTTCGAGTTCGCTACTTATGCCTATGCTGGGTACACAGGTGCACATGATAAAAG
GATAACAACCTCACCTAGTAGGCCCAGTAGTGGGTCACTTACTGAGTATTTTGCGGCGGCAGCAGCTCCAGGCTCCACACCCCGCGCGCACGGCAGCAGCAGCAACTCCT
TCCCTCCTTCAGTTCTCGCCATTTTCTTATTCTTCACCTTCAAGCCATGCGTTCATTACCTGGAAATCCCCGTTTCTAAGGTGAGAGAAGTGTGGATCTCCAAGCCAAGG
GCATTATTTGGTAGCGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGTTCGTATTAGCCAAGGGATATAATGCAAGACATTCGACGGGACTATGGGCTCATGTAAGCTATGGACGGGCTTACCGTGCTAGAGAGTATGTATTTGTATA
TGCAAGAGGTTTCTCACCTGAAGAATTGTATGTCATTGTTAATGCATATGGTGAGACACTGAAGCTTGCAAACCCATGTTCCATCTTTGAGGTTGAGATAGAAGGCGTAT
CGTCACTTACTCTTGAGTTTATGCTAATGCCCATGGTTACTTATCGACTGGATTATGGTTATTGTATGGACCGGATTACTATATTGGCTGGTTATGATTATTGTGTCCAC
TGGTGTCCCCTCAGGATCACCACCTACGTTTATGTTCATGACTGTGACCTGTGTGCCTTCGAGTTCGCTACTTATGCCTATGCTGGGTACACAGGTGCACATGATAAAAG
GATAACAACCTCACCTAGTAGGCCCAGTAGTGGGTCACTTACTGAGTATTTTGCGGCGGCAGCAGCTCCAGGCTCCACACCCCGCGCGCACGGCAGCAGCAGCAACTCCT
TCCCTCCTTCAGTTCTCGCCATTTTCTTATTCTTCACCTTCAAGCCATGCGTTCATTACCTGGAAATCCCCGTTTCTAAGGTGAGAGAAGTGTGGATCTCCAAGCCAAGG
GCATTATTTGGTAGCGGCTAG
Protein sequenceShow/hide protein sequence
MNKFVLAKGYNARHSTGLWAHVSYGRAYRAREYVFVYARGFSPEELYVIVNAYGETLKLANPCSIFEVEIEGVSSLTLEFMLMPMVTYRLDYGYCMDRITILAGYDYCVH
WCPLRITTYVYVHDCDLCAFEFATYAYAGYTGAHDKRITTSPSRPSSGSLTEYFAAAAAPGSTPRAHGSSSNSFPPSVLAIFLFFTFKPCVHYLEIPVSKVREVWISKPR
ALFGSG