; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G09670 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G09670
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUbiquitin domain-containing protein
Genome locationClcChr07:24147341..24150702
RNA-Seq ExpressionClc07G09670
SyntenyClc07G09670
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577030.1 Ubiquitin domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]4.3e-4856.73Show/hide
Query:  MGCAGSSQTNGDGEVHFATVILFFSFLCSEKFCSMFVWWLDYKKYLMIINANYAASLKSSFVGLYLIQVIEIGLNLLLYVGSIKKIRKPKSWKHPQPITR
        MGCAGSSQTNGDG             +  +  C +     +     +++       L  S +    +  I   + LL  V SIKKI KPKSWKHPQPITR
Subjt:  MGCAGSSQTNGDGEVHFATVILFFSFLCSEKFCSMFVWWLDYKKYLMIINANYAASLKSSFVGLYLIQVIEIGLNLLLYVGSIKKIRKPKSWKHPQPITR

Query:  SQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELPNYVLSEP
        SQL+QLR+EFWDTAPHYGGR                         KEIWDALRAAAEAELSLAQAIIDSAGVI+QNADLTICYDERGAKYELPNYVLSEP
Subjt:  SQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELPNYVLSEP

Query:  TNLIRDSS
        TNLIRDSS
Subjt:  TNLIRDSS

KAG6755202.1 hypothetical protein POTOM_041020 [Populus tomentosa]2.2e-4775.97Show/hide
Query:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGI--DDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNAD
        G++KKIRKPK WKHPQPIT+SQLMQ+RDEFWDTAPHYGGRK   L L++++ +GI  D HC       EIWDALRAAA+AELSLAQAI+DSAGVIVQNAD
Subjt:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGI--DDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNAD

Query:  LTICYDERGAKYELPNYVLSEPTNLIRDS
        LTICYDERGAKYELP YVL+EPTNLIR++
Subjt:  LTICYDERGAKYELPNYVLSEPTNLIRDS

XP_004137230.1 ubiquitin domain-containing protein 1 [Cucumis sativus]1.4e-4678.91Show/hide
Query:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT
        GSIKKIRKPKSWKHPQPITRSQL QLRDEFWDTAPHYGGR                         KEIWDALRAAAEAELSLAQAI+DSAGVIVQNADLT
Subjt:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
        ICYDERGAKYELPNYVLSEPTNLIRDSS
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

XP_022931411.1 ubiquitin domain-containing protein 2-like [Cucurbita moschata]2.4e-4678.12Show/hide
Query:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT
        GSIKKIRKPKSWKHPQPITRSQL+QLR+EFWDTAPHYGGR                         KEIWDALRAAAEAELSLAQAIIDSAGVI+QNADLT
Subjt:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
        ICYDERGAKYELPNYVLSEPTNLIRDSS
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

XP_038882682.1 ubiquitin domain-containing protein 2-like [Benincasa hispida]2.2e-4780.47Show/hide
Query:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT
        GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGR                         KEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT
Subjt:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
        ICYDERGAKYELPNYVLSEPTNLIRDSS
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

TrEMBL top hitse value%identityAlignment
A0A0A0KVJ9 UBD domain-containing protein6.7e-4778.91Show/hide
Query:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT
        GSIKKIRKPKSWKHPQPITRSQL QLRDEFWDTAPHYGGR                         KEIWDALRAAAEAELSLAQAI+DSAGVIVQNADLT
Subjt:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
        ICYDERGAKYELPNYVLSEPTNLIRDSS
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

A0A1S4DZK7 ubiquitin domain-containing protein 2-like7.5e-4674.81Show/hide
Query:  GLNLLLYVGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGV
        G +L    GSIKKIRKPKSWKHPQPITRSQL QLRDEFWDTAPHYGGR                         KEIWDALRAAAEAELSLAQ I+DSAGV
Subjt:  GLNLLLYVGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGV

Query:  IVQNADLTICYDERGAKYELPNYVLSEPTNLIRDS
        IVQNADLTICYDERGAKYELPNYVLSEPTNLIRDS
Subjt:  IVQNADLTICYDERGAKYELPNYVLSEPTNLIRDS

A0A6J1ETK8 ubiquitin domain-containing protein 2-like1.2e-4678.12Show/hide
Query:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT
        GSIKKIRKPKSWKHPQPITRSQL+QLR+EFWDTAPHYGGR                         KEIWDALRAAAEAELSLAQAIIDSAGVI+QNADLT
Subjt:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
        ICYDERGAKYELPNYVLSEPTNLIRDSS
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

A0A6J1J306 ubiquitin domain-containing protein 2-like1.7e-4576.56Show/hide
Query:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT
        GSIKKIRKPKSWKHPQPITR QL+QLR+EFWDTAPHYGGR                         KEIWDALRAAAEAELSLAQAIIDSAGVI+QNADLT
Subjt:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
        ICYDERG KYELPNYVLSEPTNLIRDSS
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

A0A6J1J7G7 ubiquitin domain-containing protein 1-like isoform X11.3e-4577.34Show/hide
Query:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT
        GS KKIRKPK WKHPQPITRSQL QLRDEFWDTAPHYGGR    +    N+ + +     S    +EIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT
Subjt:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
        +CYDERGAKYELP YVLSEPTNLIRDSS
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

SwissProt top hitse value%identityAlignment
Q4V8W7 Ubiquitin domain-containing protein 11.3e-1844Show/hide
Query:  KPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLTICY
        KPK WK   P+T  QL   RDEFWDTAP + GR                         KEIWDAL+AAA A    +  LAQAI+D A + + +  LT CY
Subjt:  KPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLTICY

Query:  DERGAKYELPNYVLSEPTNLIRDSS
        DE G +Y+LP Y L+ P NLI + S
Subjt:  DERGAKYELPNYVLSEPTNLIRDSS

Q5EAE3 Ubiquitin domain-containing protein 21.7e-1843.75Show/hide
Query:  KIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLT
        K  KPK WK   P+T  QL   RDEFWDTAP + GR                         KEIWDAL+AAA A    +  LAQAIID A + + +  LT
Subjt:  KIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
         CYDE G +Y+LP Y L+ P N+I + S
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

Q6DG43 Ubiquitin domain-containing protein 23.4e-1944.53Show/hide
Query:  KIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLT
        K  KPK WK   P+T  QL   RDEFWDTAP + GR                         KEIWDAL+AAA+A    +  LAQAIID A + + +  LT
Subjt:  KIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
         CYDE G +Y+LP Y LS P N+I + S
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

Q6PGH0 Ubiquitin domain-containing protein 21.7e-1843.75Show/hide
Query:  KIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLT
        K  KPK WK   P+T  QL   RDEFWDTAP + GR                         KEIWDAL+AAA A    +  LAQAIID A + + +  LT
Subjt:  KIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
         CYDE G +Y+LP Y L+ P N+I + S
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

Q8WUN7 Ubiquitin domain-containing protein 21.7e-1843.75Show/hide
Query:  KIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLT
        K  KPK WK   P+T  QL   RDEFWDTAP + GR                         KEIWDAL+AAA A    +  LAQAIID A + + +  LT
Subjt:  KIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNLIRDSS
         CYDE G +Y+LP Y L+ P N+I + S
Subjt:  ICYDERGAKYELPNYVLSEPTNLIRDSS

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein4.8e-3760Show/hide
Query:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA-ELSLAQAIIDSAGVIVQNADL
        G  +KIR+PK+WKHPQPI+R +L Q+R+EFWDTAPHYGG+                         KEIWDALRAAAE  +LSLAQ I++SAGVIVQN DL
Subjt:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEA-ELSLAQAIIDSAGVIVQNADL

Query:  TICYDERGAKYELPNYVLSEPTNLI
        TICYDE+G+KYELP YVL +P+NLI
Subjt:  TICYDERGAKYELPNYVLSEPTNLI

AT1G53400.1 Ubiquitin domain-containing protein4.5e-4368.29Show/hide
Query:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT
        GS+KKIRKPK WKH QPIT+++LM+LR+EFWDTAPHYGGR                         KEIWDALRAAAEA++SLAQAI+DSAGVIVQN DLT
Subjt:  GSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT

Query:  ICYDERGAKYELPNYVLSEPTNL
        +CYDERGAKYELP YVLSEPTNL
Subjt:  ICYDERGAKYELPNYVLSEPTNL

AT5G45740.1 Ubiquitin domain-containing protein2.8e-3760.16Show/hide
Query:  KKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICY
        KKI KPK W H +PITR+QL  +R+EFWDT+PHYGG+                         +EIW+ALRAAAEA+L LAQ I+DSAGVIVQN DLT+C+
Subjt:  KKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICY

Query:  DERGAKYELPNYVLSEPTNLIRD
        DERGA+YELP YVLSEPTNLIR+
Subjt:  DERGAKYELPNYVLSEPTNLIRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGTGCTGGATCGTCGCAGACCAACGGAGACGGTGAGGTTCACTTCGCTACTGTGATTCTTTTCTTTTCGTTTTTATGCTCAGAGAAATTTTGTTCTATGTTCGT
CTGGTGGCTTGACTACAAGAAATATTTGATGATAATCAATGCAAATTACGCTGCTAGCCTCAAATCTAGTTTTGTTGGTTTATACTTGATTCAAGTCATTGAGATAGGAC
TGAACTTGCTGCTTTATGTAGGATCCATAAAGAAGATACGGAAGCCAAAATCTTGGAAGCATCCCCAGCCAATTACAAGGTCTCAGCTCATGCAACTACGGGATGAGTTC
TGGGACACTGCACCTCACTATGGTGGCCGGAAAGATCTACTTCTCTTTCTCGAGGAAAATGTAAAACTAGGGATAGATGACCACTGTAGTTCCAGGGGACCCAATAAAGA
GATTTGGGATGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCTCTTGCACAAGCAATTATAGACAGTGCAGGGGTCATTGTTCAAAATGCAGATTTGACAATCTGTTACG
ATGAGAGAGGCGCAAAATATGAACTGCCCAACTATGTTTTGAGTGAGCCGACCAATTTGATTCGTGACAGTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGTGCTGGATCGTCGCAGACCAACGGAGACGGTGAGGTTCACTTCGCTACTGTGATTCTTTTCTTTTCGTTTTTATGCTCAGAGAAATTTTGTTCTATGTTCGT
CTGGTGGCTTGACTACAAGAAATATTTGATGATAATCAATGCAAATTACGCTGCTAGCCTCAAATCTAGTTTTGTTGGTTTATACTTGATTCAAGTCATTGAGATAGGAC
TGAACTTGCTGCTTTATGTAGGATCCATAAAGAAGATACGGAAGCCAAAATCTTGGAAGCATCCCCAGCCAATTACAAGGTCTCAGCTCATGCAACTACGGGATGAGTTC
TGGGACACTGCACCTCACTATGGTGGCCGGAAAGATCTACTTCTCTTTCTCGAGGAAAATGTAAAACTAGGGATAGATGACCACTGTAGTTCCAGGGGACCCAATAAAGA
GATTTGGGATGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCTCTTGCACAAGCAATTATAGACAGTGCAGGGGTCATTGTTCAAAATGCAGATTTGACAATCTGTTACG
ATGAGAGAGGCGCAAAATATGAACTGCCCAACTATGTTTTGAGTGAGCCGACCAATTTGATTCGTGACAGTTCATAA
Protein sequenceShow/hide protein sequence
MGCAGSSQTNGDGEVHFATVILFFSFLCSEKFCSMFVWWLDYKKYLMIINANYAASLKSSFVGLYLIQVIEIGLNLLLYVGSIKKIRKPKSWKHPQPITRSQLMQLRDEF
WDTAPHYGGRKDLLLFLEENVKLGIDDHCSSRGPNKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS