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Clc07G09720 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G09720
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:24183548..24183937
RNA-Seq ExpressionClc07G09720
SyntenyClc07G09720
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015053.1 hypothetical protein SDJN02_22686, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3982.14Show/hide
Query:  MPVSAD-----SSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKF
        MP SAD     SSSSSS SSSFL+CA P S SVQLVSK  SDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKL+NAKKAWRK 
Subjt:  MPVSAD-----SSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKF

Query:  IICFTVSSLSSS
        I CF VS+L+ S
Subjt:  IICFTVSSLSSS

XP_022142869.1 uncharacterized protein LOC111012878 [Momordica charantia]1.1e-4189.9Show/hide
Query:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF
        MP+SA SSSSSS SSSFLEC  PTSPSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSPA+VCSGYEV SKLD+AKKAWRKF+ICF
Subjt:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF

XP_022984340.1 uncharacterized protein LOC111482673 isoform X1 [Cucurbita maxima]1.1e-3886.87Show/hide
Query:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF
        MP SADSSSSSS SSSFL+CA P S SVQLVSKS SDRLL KFFDASKF+FDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKL+N KKAWRKFI CF
Subjt:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF

XP_038876207.1 uncharacterized protein LOC120068490 isoform X1 [Benincasa hispida]1.1e-4185.19Show/hide
Query:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICFT
        MP+SADSSSSSS S+SFLECA PTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPI R+VFLDSPADVCSGY VLSKLD A+KAWRKFIICF+
Subjt:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICFT

Query:  VSSLSSSH
            S +H
Subjt:  VSSLSSSH

XP_038876217.1 uncharacterized protein LOC120068490 isoform X2 [Benincasa hispida]1.9e-4190Show/hide
Query:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICFT
        MP+SADSSSSSS S+SFLECA PTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPI R+VFLDSPADVCSGY VLSKLD A+KAWRKFIICF+
Subjt:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICFT

TrEMBL top hitse value%identityAlignment
A0A6J1CMP9 uncharacterized protein LOC1110128785.3e-4289.9Show/hide
Query:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF
        MP+SA SSSSSS SSSFLEC  PTSPSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSPA+VCSGYEV SKLD+AKKAWRKF+ICF
Subjt:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF

A0A6J1EYJ9 uncharacterized protein LOC1114376032.7e-3884.62Show/hide
Query:  MPVSAD-----SSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKF
        MP SAD     SSSSSS SSSFL+CA P S SVQLVSK  SDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKL+NAKKAWRK 
Subjt:  MPVSAD-----SSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKF

Query:  IICF
        I CF
Subjt:  IICF

A0A6J1J4Z5 uncharacterized protein LOC111482673 isoform X25.5e-3986.87Show/hide
Query:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF
        MP SADSSSSSS SSSFL+CA P S SVQLVSKS SDRLL KFFDASKF+FDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKL+N KKAWRKFI CF
Subjt:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF

A0A6J1J7J0 uncharacterized protein LOC1114820711.8e-3782.83Show/hide
Query:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF
        MP+S +SS+ S  SS F+ECA PT PSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKL+ AK AWRKF+ICF
Subjt:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF

A0A6J1J8D3 uncharacterized protein LOC111482673 isoform X15.5e-3986.87Show/hide
Query:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF
        MP SADSSSSSS SSSFL+CA P S SVQLVSKS SDRLL KFFDASKF+FDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKL+N KKAWRKFI CF
Subjt:  MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15140.1 unknown protein8.7e-0545.61Show/hide
Query:  TSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVF----LDSPADVC
        T+  V+ +   +   LL KF D S F FDY QSSLWSP +PR       LDS + VC
Subjt:  TSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVF----LDSPADVC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGTCTCCGCCGATTCTTCTTCTTCTTCCTCCCGCTCCTCTTCATTTCTAGAATGCGCCATTCCGACGAGTCCGAGCGTTCAACTCGTTTCTAAATCGGTGTCGGA
TCGGCTTCTCGGCAAGTTCTTCGACGCCTCAAAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGACGAGTGTTTCTGGATTCTCCGGCCG
ATGTTTGCTCCGGTTACGAGGTTCTCTCGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGTTTCACAGTAAGTTCTCTCTCATCATCGCATTGTGAT
TTACGCAGTGATTGCTTTGTTTCGTTATCTTGTTTTCGAAATAGATTCGGTGTAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGTCTCCGCCGATTCTTCTTCTTCTTCCTCCCGCTCCTCTTCATTTCTAGAATGCGCCATTCCGACGAGTCCGAGCGTTCAACTCGTTTCTAAATCGGTGTCGGA
TCGGCTTCTCGGCAAGTTCTTCGACGCCTCAAAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGACGAGTGTTTCTGGATTCTCCGGCCG
ATGTTTGCTCCGGTTACGAGGTTCTCTCGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGTTTCACAGTAAGTTCTCTCTCATCATCGCATTGTGAT
TTACGCAGTGATTGCTTTGTTTCGTTATCTTGTTTTCGAAATAGATTCGGTGTAATGTGA
Protein sequenceShow/hide protein sequence
MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICFTVSSLSSSHCD
LRSDCFVSLSCFRNRFGVM