; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G09740 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G09740
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionanaphase-promoting complex subunit 6
Genome locationClcChr07:24198020..24199353
RNA-Seq ExpressionClc07G09740
SyntenyClc07G09740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577034.1 Anaphase-promoting complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0847.06Show/hide
Query:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP
        R+CV K LYSS I  FFAD VAAFTEDPAD    +            F+LLNAS IVL DP F Y AA C  L    +   C  M   A +DE  N +D 
Subjt:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP

Query:  KE
        K+
Subjt:  KE
KAG7015055.1 Anaphase-promoting complex subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-0847.06Show/hide
Query:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP
        R+CV K LYSS I  FFAD VAAFTEDPAD    +            F+LLNAS IVL DP F Y AA C  L    +   C  M   A +DE  N +D 
Subjt:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP

Query:  KE
        K+
Subjt:  KE
XP_022142889.1 anaphase-promoting complex subunit 6 [Momordica charantia]7.9e-0945.3Show/hide
Query:  MKFHENE----GGRNRNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEM
        MK  E E     G  R+CV K LYSS I  FFAD VAAFTEDPAD    +            F+LLNAS IVL DP F Y AA C  L    +   C  M
Subjt:  MKFHENE----GGRNRNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEM

Query:  SSLALMDECQNGMDPKE
           A +DE  N +D K+
Subjt:  SSLALMDECQNGMDPKE
XP_022931441.1 anaphase-promoting complex subunit 6-like [Cucurbita moschata]1.8e-0847.06Show/hide
Query:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP
        R+CV K LYSS I  FFAD VAAFTEDPAD    +            F+LLNAS IVL DP F Y AA C  L    +   C  M   A +DE  N +D 
Subjt:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP

Query:  KE
        K+
Subjt:  KE
XP_023551896.1 anaphase-promoting complex subunit 6-like [Cucurbita pepo subsp. pepo]1.8e-0847.06Show/hide
Query:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP
        R+CV K LYSS I  FFAD VAAFTEDPAD    +            F+LLNAS IVL DP F Y AA C  L    +   C  M   A +DE  N +D 
Subjt:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP

Query:  KE
        K+
Subjt:  KE
TrEMBL top hitse value%identityAlignment
A0A1S3B4Z0 anaphase-promoting complex subunit 67.2e-0845.1Show/hide
Query:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP
        R+C+ K LYSS I  FFAD V AFTEDPAD    +            F+LLNAS IVL DP F Y AA C  L    +   C  M   A +DE  N +D 
Subjt:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP

Query:  KE
        K+
Subjt:  KE
A0A5A7SUI9 Anaphase-promoting complex subunit 67.2e-0845.1Show/hide
Query:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP
        R+C+ K LYSS I  FFAD V AFTEDPAD    +            F+LLNAS IVL DP F Y AA C  L    +   C  M   A +DE  N +D 
Subjt:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP

Query:  KE
        K+
Subjt:  KE
A0A6J1CMR4 anaphase-promoting complex subunit 63.8e-0945.3Show/hide
Query:  MKFHENE----GGRNRNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEM
        MK  E E     G  R+CV K LYSS I  FFAD VAAFTEDPAD    +            F+LLNAS IVL DP F Y AA C  L    +   C  M
Subjt:  MKFHENE----GGRNRNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEM

Query:  SSLALMDECQNGMDPKE
           A +DE  N +D K+
Subjt:  SSLALMDECQNGMDPKE
A0A6J1ETN4 anaphase-promoting complex subunit 6-like8.5e-0947.06Show/hide
Query:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP
        R+CV K LYSS I  FFAD VAAFTEDPAD    +            F+LLNAS IVL DP F Y AA C  L    +   C  M   A +DE  N +D 
Subjt:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP

Query:  KE
        K+
Subjt:  KE
A0A6J1JA67 anaphase-promoting complex subunit 6-like1.1e-0847.06Show/hide
Query:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP
        R+CV K LYSS I  FFAD VAAFTEDPAD    +            F+LLNAS IVL DP F Y AA C  L    +   C  M   A +DE  N +D 
Subjt:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDP

Query:  KE
        K+
Subjt:  KE
SwissProt top hitse value%identityAlignment
B3DNN5 Anaphase-promoting complex subunit 63.4e-0750Show/hide
Query:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANC
        R+CV K LYSS I  FFAD VAA T DP+D    +            F+LLNAS IVL D  F Y AA C
Subjt:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANC
B3DNN5 Anaphase-promoting complex subunit 68.5e-0672.41Show/hide
Query:  LWLQSDGQFCTEMSSLALMDECQNGMDPK
        LWL+ D QFCTEM ++ALMDECQNG+D K
Subjt:  LWLQSDGQFCTEMSSLALMDECQNGMDPK
Arabidopsis top hitse value%identityAlignment
AT1G78770.1 anaphase promoting complex 62.4e-0850Show/hide
Query:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANC
        R+CV K LYSS I  FFAD VAA T DP+D    +            F+LLNAS IVL D  F Y AA C
Subjt:  RNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWT---------QFYLLNASNIVLPDPPFCYPAANC
AT1G78770.1 anaphase promoting complex 66.0e-0772.41Show/hide
Query:  LWLQSDGQFCTEMSSLALMDECQNGMDPK
        LWL+ D QFCTEM ++ALMDECQNG+D K
Subjt:  LWLQSDGQFCTEMSSLALMDECQNGMDPK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCATGAGAATGAGGGAGGAAGAAATCGAAACTGTGTGAGGAAGCGTCTCTACTCCTCCCCCATCTTCTTCTTCTTCGCCGACAATGTCGCCGCTTTCACTGA
GGATCCTGCCGACACTTTACATCTTTCTTGGACCCAATTTTACCTCCTCAATGCCTCCAACATCGTCCTTCCTGATCCTCCGTTTTGCTACCCTGCTGCTAATTGCCCTA
CTTTGTGGCTGCAATCAGACGGTCAGTTTTGCACTGAAATGTCAAGTTTAGCTCTTATGGACGAATGCCAAAATGGGATGGATCCAAAGGAAGACCGTTTGGCAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCCATGAGAATGAGGGAGGAAGAAATCGAAACTGTGTGAGGAAGCGTCTCTACTCCTCCCCCATCTTCTTCTTCTTCGCCGACAATGTCGCCGCTTTCACTGA
GGATCCTGCCGACACTTTACATCTTTCTTGGACCCAATTTTACCTCCTCAATGCCTCCAACATCGTCCTTCCTGATCCTCCGTTTTGCTACCCTGCTGCTAATTGCCCTA
CTTTGTGGCTGCAATCAGACGGTCAGTTTTGCACTGAAATGTCAAGTTTAGCTCTTATGGACGAATGCCAAAATGGGATGGATCCAAAGGAAGACCGTTTGGCAAGGTGA
Protein sequenceShow/hide protein sequence
MKFHENEGGRNRNCVRKRLYSSPIFFFFADNVAAFTEDPADTLHLSWTQFYLLNASNIVLPDPPFCYPAANCPTLWLQSDGQFCTEMSSLALMDECQNGMDPKEDRLAR