CuGenDBv2

Gene ID	Clc07G10370
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	DExH-box ATP-dependent RNA helicase DExH6 isoform X1
Genome location	ClcChr07:24943304..24944518
RNA-Seq Expression	Clc07G10370
Synteny	Clc07G10370
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008451833.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucumis melo]

5.8e-75

53.91

Show/hide

Query:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-
        P+K+GKRAVVET SG RV        FELSLKQTDN PLIVYDE+TRGDGG                                    EN++NGNDEAG+ 
Subjt:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------
            EKMDIENKSNQQPEEMIMSSP N+VTVVVDRWL FW+KALDIAQLYCLRERLSSA LFKVKHPNGVLP VLGASMHALACILSYDGL         
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------

Query:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR
                                 + +F ++  N +     +ANGTSILND LSQNLLP  DFRTANPSDPSSP  R    P     RS  +    S R
Subjt:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR

Query:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ
        E+       P RD+DA                Q+QHAQEHNTRKQR SHKER AAKQQ
Subjt:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ

XP_008451836.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH6 isoform X4 [Cucumis melo]

5.8e-75

53.91

Show/hide

Query:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-
        P+K+GKRAVVET SG RV        FELSLKQTDN PLIVYDE+TRGDGG                                    EN++NGNDEAG+ 
Subjt:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------
            EKMDIENKSNQQPEEMIMSSP N+VTVVVDRWL FW+KALDIAQLYCLRERLSSA LFKVKHPNGVLP VLGASMHALACILSYDGL         
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------

Query:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR
                                 + +F ++  N +     +ANGTSILND LSQNLLP  DFRTANPSDPSSP  R    P     RS  +    S R
Subjt:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR

Query:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ
        E+       P RD+DA                Q+QHAQEHNTRKQR SHKER AAKQQ
Subjt:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ

XP_038906440.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Benincasa hispida]

1.6e-80

56.01

Show/hide

Query:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-
        P++KGKRAVVETGSG RV        FELSLKQTDNRPLIVYDEITRGDGG                                   +ENDDNGNDEAG+ 
Subjt:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------
            EKMDIENKSNQQPEEMIMSSP NSVTVVVDRWL FW+KALDIAQLYCLRERLSSA LFKVKHPNGVLPSVL ASMHAL+CILSYDGL         
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------

Query:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQ-----HRSHIEIR
                                 + +F++   N +     +ANGTSILND LSQNLLPP DFR  NPSD S+PNFR     +  +     HR H   +
Subjt:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQ-----HRSHIEIR

Query:  SLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQ
               P RD+ AT++QHAQE+NTRKQRK HKE  AAKQQ
Subjt:  SLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQ

XP_038906444.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X3 [Benincasa hispida]

1.6e-80

56.01

Show/hide

Query:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-
        P++KGKRAVVETGSG RV        FELSLKQTDNRPLIVYDEITRGDGG                                   +ENDDNGNDEAG+ 
Subjt:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------
            EKMDIENKSNQQPEEMIMSSP NSVTVVVDRWL FW+KALDIAQLYCLRERLSSA LFKVKHPNGVLPSVL ASMHAL+CILSYDGL         
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------

Query:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQ-----HRSHIEIR
                                 + +F++   N +     +ANGTSILND LSQNLLPP DFR  NPSD S+PNFR     +  +     HR H   +
Subjt:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQ-----HRSHIEIR

Query:  SLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQ
               P RD+ AT++QHAQE+NTRKQRK HKE  AAKQQ
Subjt:  SLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQ

XP_038906450.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X4 [Benincasa hispida]

1.6e-80

56.01

Show/hide

Query:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-
        P++KGKRAVVETGSG RV        FELSLKQTDNRPLIVYDEITRGDGG                                   +ENDDNGNDEAG+ 
Subjt:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------
            EKMDIENKSNQQPEEMIMSSP NSVTVVVDRWL FW+KALDIAQLYCLRERLSSA LFKVKHPNGVLPSVL ASMHAL+CILSYDGL         
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------

Query:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQ-----HRSHIEIR
                                 + +F++   N +     +ANGTSILND LSQNLLPP DFR  NPSD S+PNFR     +  +     HR H   +
Subjt:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQ-----HRSHIEIR

Query:  SLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQ
               P RD+ AT++QHAQE+NTRKQRK HKE  AAKQQ
Subjt:  SLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BSE1 DExH-box ATP-dependent RNA helicase DExH6 isoform X4

2.8e-75

53.91

Show/hide

Query:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-
        P+K+GKRAVVET SG RV        FELSLKQTDN PLIVYDE+TRGDGG                                    EN++NGNDEAG+ 
Subjt:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------
            EKMDIENKSNQQPEEMIMSSP N+VTVVVDRWL FW+KALDIAQLYCLRERLSSA LFKVKHPNGVLP VLGASMHALACILSYDGL         
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------

Query:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR
                                 + +F ++  N +     +ANGTSILND LSQNLLP  DFRTANPSDPSSP  R    P     RS  +    S R
Subjt:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR

Query:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ
        E+       P RD+DA                Q+QHAQEHNTRKQR SHKER AAKQQ
Subjt:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ

A0A1S3BSG9 DExH-box ATP-dependent RNA helicase DExH6 isoform X3

2.8e-75

53.91

Show/hide

Query:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-
        P+K+GKRAVVET SG RV        FELSLKQTDN PLIVYDE+TRGDGG                                    EN++NGNDEAG+ 
Subjt:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------
            EKMDIENKSNQQPEEMIMSSP N+VTVVVDRWL FW+KALDIAQLYCLRERLSSA LFKVKHPNGVLP VLGASMHALACILSYDGL         
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------

Query:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR
                                 + +F ++  N +     +ANGTSILND LSQNLLP  DFRTANPSDPSSP  R    P     RS  +    S R
Subjt:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR

Query:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ
        E+       P RD+DA                Q+QHAQEHNTRKQR SHKER AAKQQ
Subjt:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ

A0A1S3BTJ2 DExH-box ATP-dependent RNA helicase DExH6 isoform X1

2.8e-75

53.91

Show/hide

Query:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-
        P+K+GKRAVVET SG RV        FELSLKQTDN PLIVYDE+TRGDGG                                    EN++NGNDEAG+ 
Subjt:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------
            EKMDIENKSNQQPEEMIMSSP N+VTVVVDRWL FW+KALDIAQLYCLRERLSSA LFKVKHPNGVLP VLGASMHALACILSYDGL         
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------

Query:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR
                                 + +F ++  N +     +ANGTSILND LSQNLLP  DFRTANPSDPSSP  R    P     RS  +    S R
Subjt:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR

Query:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ
        E+       P RD+DA                Q+QHAQEHNTRKQR SHKER AAKQQ
Subjt:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ

A0A1S3BTJ7 DExH-box ATP-dependent RNA helicase DExH6 isoform X6

2.8e-75

53.91

Show/hide

Query:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-
        P+K+GKRAVVET SG RV        FELSLKQTDN PLIVYDE+TRGDGG                                    EN++NGNDEAG+ 
Subjt:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------
            EKMDIENKSNQQPEEMIMSSP N+VTVVVDRWL FW+KALDIAQLYCLRERLSSA LFKVKHPNGVLP VLGASMHALACILSYDGL         
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------

Query:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR
                                 + +F ++  N +     +ANGTSILND LSQNLLP  DFRTANPSDPSSP  R    P     RS  +    S R
Subjt:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR

Query:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ
        E+       P RD+DA                Q+QHAQEHNTRKQR SHKER AAKQQ
Subjt:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ

A0A5D3CYG7 DExH-box ATP-dependent RNA helicase DExH6 isoform X1

2.8e-75

53.91

Show/hide

Query:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-
        P+K+GKRAVVET SG RV        FELSLKQTDN PLIVYDE+TRGDGG                                    EN++NGNDEAG+ 
Subjt:  PRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV----------------------------------VENDDNGNDEAGV-

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------
            EKMDIENKSNQQPEEMIMSSP N+VTVVVDRWL FW+KALDIAQLYCLRERLSSA LFKVKHPNGVLP VLGASMHALACILSYDGL         
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGL---------

Query:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR
                                 + +F ++  N +     +ANGTSILND LSQNLLP  DFRTANPSDPSSP  R    P     RS  +    S R
Subjt:  -------------------------IWYFIRISRNVD----VDANGTSILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNR

Query:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ
        E+       P RD+DA                Q+QHAQEHNTRKQR SHKER AAKQQ
Subjt:  EN-------PPRDEDAT---------------QEQHAQEHNTRKQRKSHKERKAAKQQ

SwissProt top hits

e value

%identity

Alignment

F4IDQ6 DExH-box ATP-dependent RNA helicase DExH2

5.6e-20

32.07

Show/hide

Query:  KKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV------------------------------VENDDNGNDEAG--VEKMDI
        K   R+V+ET +G +V   S     ++S  + D   LIV+DEITRGD GV                              V++DD  + + G   + MDI
Subjt:  KKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV------------------------------VENDDNGNDEAG--VEKMDI

Query:  ENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGLIWYFIRISRNVDVDANGT
        + K   +P E IM  P NSV VVVDRWL F   A +IAQ+Y LRERL ++ LFKVKHP   LP  LGASM+A+A +LSYD L    ++      +    T
Subjt:  ENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGLIWYFIRISRNVDVDANGT

Query:  SILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQN
        S+++ +  ++ +P ++       DP++     +++        ++E    SN  +     D             KQ+K   E K  K  N
Subjt:  SILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQN

F4INY4 DExH-box ATP-dependent RNA helicase DExH6

2.0e-25

43.16

Show/hide

Query:  KRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV-----------------------------------VENDD-----NGNDEAGV
        +R +VET SG +V   S    F LS K+ D   L+V+DEITRGDGG+                                    E DD     N N+E   
Subjt:  KRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV-----------------------------------VENDD-----NGNDEAGV

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDG
            E MDI  + +++  +M MSSP NSV +VVDRWL F T AL++AQ+Y LRERL ++ LFKV HP   LP  LGASMHA+A ILSYDG
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDG

Arabidopsis top hits

e value

%identity

Alignment

AT1G06670.1 nuclear DEIH-boxhelicase

4.0e-21

32.07

Show/hide

Query:  KKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV------------------------------VENDDNGNDEAG--VEKMDI
        K   R+V+ET +G +V   S     ++S  + D   LIV+DEITRGD GV                              V++DD  + + G   + MDI
Subjt:  KKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV------------------------------VENDDNGNDEAG--VEKMDI

Query:  ENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGLIWYFIRISRNVDVDANGT
        + K   +P E IM  P NSV VVVDRWL F   A +IAQ+Y LRERL ++ LFKVKHP   LP  LGASM+A+A +LSYD L    ++      +    T
Subjt:  ENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGLIWYFIRISRNVDVDANGT

Query:  SILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQN
        S+++ +  ++ +P ++       DP++     +++        ++E    SN  +     D             KQ+K   E K  K  N
Subjt:  SILNDSLSQNLLPPSDFRTANPSDPSSPNFRFQIQPMQGQHRSHIEIRSLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQN

AT2G30800.1 helicase in vascular tissue and tapetum

1.4e-26

43.16

Show/hide

Query:  KRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV-----------------------------------VENDD-----NGNDEAGV
        +R +VET SG +V   S    F LS K+ D   L+V+DEITRGDGG+                                    E DD     N N+E   
Subjt:  KRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGV-----------------------------------VENDD-----NGNDEAGV

Query:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDG
            E MDI  + +++  +M MSSP NSV +VVDRWL F T AL++AQ+Y LRERL ++ LFKV HP   LP  LGASMHA+A ILSYDG
Subjt:  ----EKMDIENKSNQQPEEMIMSSPVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTAGTGACCCTGGCATACTCCATGCTGTCCTTGTGGCTGGTTTATATCCTATGGTGGGAGATTACTTTCCACCCCAGGAAAAAGGGAAAACGGGCTGTTGTAGAAAC
TGGTTCAGGGGGCAGAGTTCCTTTTGCATCCACAGTCCCTTATTTTGAACTGTCACTCAAGCAAACGGATAATCGCCCTCTAATTGTTTATGATGAGATAACCCGTGGGG
ACGGTGGTGTTGTTGAAAATGACGATAATGGCAATGATGAAGCTGGTGTAGAGAAAATGGATATAGAAAATAAATCAAATCAACAACCAGAAGAGATGATTATGTCCTCC
CCTGTTAACTCAGTGACTGTGGTTGTTGACCGTTGGCTACATTTTTGGACAAAGGCACTTGATATTGCTCAGTTATACTGTTTGAGAGAGCGATTATCTTCAGCTAACTT
ATTCAAAGTAAAGCATCCAAATGGAGTTCTTCCTTCTGTTCTTGGGGCATCTATGCATGCCTTGGCTTGCATTCTATCTTATGATGGGCTTATCTGGTATTTCATTAGAA
TCAGTAGAAATGTTGACGTCGATGCAAATGGAACATCAATTTTGAATGATTCGTTAAGTCAGAATCTTTTACCACCGTCTGATTTTAGAACAGCAAACCCAAGTGACCCA
TCAAGCCCTAATTTTAGGTTTCAAATTCAGCCTATGCAAGGTCAACACCGCAGTCACATAGAGATCAGAAGCCTTTCAAACCGGGAAAACCCTCCTCGAGACGAAGATGC
TACCCAGGAGCAGCATGCTCAAGAGCACAATACACGTAAGCAGAGAAAGTCCCACAAGGAGCGCAAGGCAGCCAAACAGCAGAATCTCCATCGGGAGACCTCAGTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MLVTLAYSMLSLWLVYILWWEITFHPRKKGKRAVVETGSGGRVPFASTVPYFELSLKQTDNRPLIVYDEITRGDGGVVENDDNGNDEAGVEKMDIENKSNQQPEEMIMSS
PVNSVTVVVDRWLHFWTKALDIAQLYCLRERLSSANLFKVKHPNGVLPSVLGASMHALACILSYDGLIWYFIRISRNVDVDANGTSILNDSLSQNLLPPSDFRTANPSDP
SSPNFRFQIQPMQGQHRSHIEIRSLSNRENPPRDEDATQEQHAQEHNTRKQRKSHKERKAAKQQNLHRETSV

Clc07G10370 (gene) of Watermelon (cordophanus) v2 genome