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Clc07G10850 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G10850
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionaspartic proteinase CDR1-like
Genome locationClcChr07:25486971..25487484
RNA-Seq ExpressionClc07G10850
SyntenyClc07G10850
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily
IPR032799 - Xylanase inhibitor, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149004.1 probable aspartic protease At2g35615 [Cucumis sativus]4.6e-3066Show/hide
Query:  LRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        L  VI+AKRV+DPS ILELCY+A  ++DLNIP+IT HFAGGA VKLLP+NTF PVA NVTC TF P ++ A+FGNLAQ++F +GYDL   R SF+P +CA
Subjt:  LRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

XP_022136655.1 aspartic proteinase CDR1-like [Momordica charantia]3.5e-3069Show/hide
Query:  LRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        L  VIRAKR EDP+ ILELCYA  +I D +IP IT HF G AAVKLLPLNTF  VA NV+C TF P+S+ A+FGNLAQ++FL+GYDLH  R SFKPTVCA
Subjt:  LRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

XP_022964071.1 aspartic proteinase CDR1-like [Cucurbita moschata]1.1e-2865.71Show/hide
Query:  ICGLRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKS--AVFGNLAQVHFLIGYDLHKIRFSFK
        I  L  V+RAKRVEDP  ILELCY A  ++DL+IP+ITTHF+GGAAVKLLPLNTF+ VA NVTC +F  +S     +FGNLAQV+FLIGYDL + R SFK
Subjt:  ICGLRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKS--AVFGNLAQVHFLIGYDLHKIRFSFK

Query:  PTVCA
          VCA
Subjt:  PTVCA

XP_023514483.1 aspartic proteinase CDR1-like [Cucurbita pepo subsp. pepo]1.5e-2865.71Show/hide
Query:  ICGLRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKS--AVFGNLAQVHFLIGYDLHKIRFSFK
        I  L  V+RAKRVEDPS ILELCY A  ++DL+IP+ITTHF+GGAAVKLLPLNTF+ VA NVTC +F  +S    ++FGNLAQV+FLIGYDL   R  FK
Subjt:  ICGLRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKS--AVFGNLAQVHFLIGYDLHKIRFSFK

Query:  PTVCA
          VCA
Subjt:  PTVCA

XP_038889220.1 aspartic proteinase CDR1-like [Benincasa hispida]1.1e-2869.79Show/hide
Query:  VIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVC
        VI+AKRV+DPS ILELCYAA   +DL+IPVI  HFAGGA VKLLPLNTF  VA NVTC T  P S  A+FGNLAQ++F++GYDL   R SFKPTVC
Subjt:  VIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVC

TrEMBL top hitse value%identityAlignment
A0A0A0KZZ3 Peptidase A1 domain-containing protein2.2e-3066Show/hide
Query:  LRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        L  VI+AKRV+DPS ILELCY+A  ++DLNIP+IT HFAGGA VKLLP+NTF PVA NVTC TF P ++ A+FGNLAQ++F +GYDL   R SF+P +CA
Subjt:  LRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

A0A5A7TPZ5 Putative aspartic protease4.7e-2864Show/hide
Query:  LRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        L  VI+AKRV+DPS ILELCY+A  + DLNIP+IT HF+G A VKLLP+NTF PVA NV C T  P +  A+FGNLAQ++F +GYDL   R SFKPT CA
Subjt:  LRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

A0A6J1C4J6 aspartic proteinase CDR1-like1.7e-3069Show/hide
Query:  LRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        L  VIRAKR EDP+ ILELCYA  +I D +IP IT HF G AAVKLLPLNTF  VA NV+C TF P+S+ A+FGNLAQ++FL+GYDLH  R SFKPTVCA
Subjt:  LRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

A0A6J1HHU3 aspartic proteinase CDR1-like5.5e-2965.71Show/hide
Query:  ICGLRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKS--AVFGNLAQVHFLIGYDLHKIRFSFK
        I  L  V+RAKRVEDP  ILELCY A  ++DL+IP+ITTHF+GGAAVKLLPLNTF+ VA NVTC +F  +S     +FGNLAQV+FLIGYDL + R SFK
Subjt:  ICGLRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKS--AVFGNLAQVHFLIGYDLHKIRFSFK

Query:  PTVCA
          VCA
Subjt:  PTVCA

A0A6J1KKI8 aspartic proteinase CDR1-like7.9e-2863.81Show/hide
Query:  ICGLRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPT--SKSAVFGNLAQVHFLIGYDLHKIRFSFK
        I  L  V+RAKRVEDPS ILELCY A  ++DL+IP+IT HF+GGAAVKLLPLNTF+ VA NVTC +F  +      +FGNLAQV+ LIGYDL + R SFK
Subjt:  ICGLRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPT--SKSAVFGNLAQVHFLIGYDLHKIRFSFK

Query:  PTVCA
          VCA
Subjt:  PTVCA

SwissProt top hitse value%identityAlignment
Q3EBM5 Probable aspartic protease At2g356154.8e-1439.18Show/hide
Query:  VIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        V  AKRV DP  +L  C+ +    ++ +P IT HF  GA V+L P+N F+ ++ ++ C + +PT++ A++GN AQ+ FL+GYDL     SF+   C+
Subjt:  VIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

Q6XBF8 Aspartic proteinase CDR18.8e-1645.83Show/hide
Query:  IRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        I A++ +DP   L LCY+A    DL +PVIT HF  GA VKL   N F+ V+ ++ CF F  +   +++GN+AQ++FL+GYD      SFKPT CA
Subjt:  IRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

Arabidopsis top hitse value%identityAlignment
AT1G31450.1 Eukaryotic aspartyl protease family protein4.5e-1539.18Show/hide
Query:  VIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        V  AKRV DP  +L  C+ + D  ++ +P IT HF   A VKL P+N F+ +  +  C + +PT++ A++GN+ Q+ FL+GYDL     SF+   C+
Subjt:  VIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

AT1G64830.1 Eukaryotic aspartyl protease family protein8.7e-1948.96Show/hide
Query:  IRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        I+A+RV+DP  IL LCY   D +   +P IT HF GG  VKL  LNTF+ V+ +V+CF F    +  +FGNLAQ++FL+GYD      SFK T C+
Subjt:  IRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

AT2G28030.1 Eukaryotic aspartyl protease family protein1.6e-0939.39Show/hide
Query:  IRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVT-CFTFMPTS--KSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        + A R  DP+    LCY   D  D+  PVIT HF+GGA + L   N +I      T C   +  +  + A+FGN AQ +FL+GYD   +  SF PT C+
Subjt:  IRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVT-CFTFMPTS--KSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

AT2G35615.1 Eukaryotic aspartyl protease family protein3.4e-1539.18Show/hide
Query:  VIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        V  AKRV DP  +L  C+ +    ++ +P IT HF  GA V+L P+N F+ ++ ++ C + +PT++ A++GN AQ+ FL+GYDL     SF+   C+
Subjt:  VIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA

AT5G33340.1 Eukaryotic aspartyl protease family protein6.2e-1745.83Show/hide
Query:  IRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA
        I A++ +DP   L LCY+A    DL +PVIT HF  GA VKL   N F+ V+ ++ CF F  +   +++GN+AQ++FL+GYD      SFKPT CA
Subjt:  IRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAVFGNLAQVHFLIGYDLHKIRFSFKPTVCA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAAATTGCCAATGTCAAACCAACATTCTCCTATCATTTCCGGGGGCAAAGTCGTTTCTACCCCTATCATCTCAAACTCTTGAAGCAATCTCCGTTGCAAATATG
CGGTTTGAGGCCTGTTATTCGAGCAAAGCGGGTGGAGGATCCATCCAGGATTCTTGAATTGTGCTATGCTGCGATGGATATCAATGATTTGAATATTCCGGTAATTACAA
CTCATTTTGCTGGCGGTGCCGCTGTGAAGTTGTTGCCCTTGAATACGTTTATTCCGGTTGCTCCTAATGTCACTTGTTTCACTTTTATGCCCACATCCAAATCAGCCGTT
TTTGGGAACTTGGCCCAGGTCCACTTTTTGATTGGATATGATCTTCACAAAATTAGATTCTCATTTAAACCTACTGTCTGTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAAATTGCCAATGTCAAACCAACATTCTCCTATCATTTCCGGGGGCAAAGTCGTTTCTACCCCTATCATCTCAAACTCTTGAAGCAATCTCCGTTGCAAATATG
CGGTTTGAGGCCTGTTATTCGAGCAAAGCGGGTGGAGGATCCATCCAGGATTCTTGAATTGTGCTATGCTGCGATGGATATCAATGATTTGAATATTCCGGTAATTACAA
CTCATTTTGCTGGCGGTGCCGCTGTGAAGTTGTTGCCCTTGAATACGTTTATTCCGGTTGCTCCTAATGTCACTTGTTTCACTTTTATGCCCACATCCAAATCAGCCGTT
TTTGGGAACTTGGCCCAGGTCCACTTTTTGATTGGATATGATCTTCACAAAATTAGATTCTCATTTAAACCTACTGTCTGTGCTTAG
Protein sequenceShow/hide protein sequence
MSKIANVKPTFSYHFRGQSRFYPYHLKLLKQSPLQICGLRPVIRAKRVEDPSRILELCYAAMDINDLNIPVITTHFAGGAAVKLLPLNTFIPVAPNVTCFTFMPTSKSAV
FGNLAQVHFLIGYDLHKIRFSFKPTVCA