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Clc07G11280 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G11280
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:25934064..25934684
RNA-Seq ExpressionClc07G11280
SyntenyClc07G11280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577140.1 hypothetical protein SDJN03_24714, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4279.56Show/hide
Query:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKNP-------SPEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQEA
        MI NLIS+LNKKLQAVEISNR RRTKKTTN  YR D+SKK          PEI+KVKKRVRFADTEPVIIAI D EER  EEETEKKVVRITVKLTKQEA
Subjt:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKNP-------SPEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQEA

Query:  NRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN
        NRMLSRCSDGGVL+F DVA ELMRIPA RVSSSM+ N
Subjt:  NRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN

KAG7015140.1 hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4281.02Show/hide
Query:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKN----PS---PEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQEA
        MI NLIS+LNKKLQAVEISNR RRTKKTTN  YR D+SKK     PS   PEI+KVKKRVRFADTEPVIIAI D EER  EEETEKKVVRITVKLTKQEA
Subjt:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKN----PS---PEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQEA

Query:  NRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN
        NRMLSRCSDGGVL+F DVA ELMRIPA RVSSSM+ N
Subjt:  NRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN

XP_022931429.1 uncharacterized protein LOC111437608 [Cucurbita moschata]1.0e-4282.84Show/hide
Query:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKN----PS---PEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQEA
        MI NLIS+LNKKLQAVEISNR RRTKKTTN  YR D+SKK     PS   PEI+KVKKRVRFADTEPVIIAI D EER  EEETEKKVVRITVKLTKQEA
Subjt:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKN----PS---PEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQEA

Query:  NRMLSRCSDGGVLDFGDVACELMRIPATRVSSSM
        NRMLSRCSDGGVL+FGDVA ELMRIPA RVSSSM
Subjt:  NRMLSRCSDGGVLDFGDVACELMRIPATRVSSSM

XP_022985430.1 uncharacterized protein LOC111483436 [Cucurbita maxima]1.7e-4281.62Show/hide
Query:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKK------NPS---PEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQ
        MI NLIS+LNKKLQAVEISNR RRTKKTTN  YR D+SKK      +PS   PEI+KVKKRVRFADTEPVIIAI D EER  EEETEKKVVRITVKLTKQ
Subjt:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKK------NPS---PEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQ

Query:  EANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSM
        EANRMLSRCSDGGVL+FGDVA ELMRIPA RVSSSM
Subjt:  EANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSM

XP_038906331.1 uncharacterized protein LOC120092170 [Benincasa hispida]5.5e-4983.45Show/hide
Query:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKK---------NPSPEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQ
        MISN I +LNKKLQAVEISNR RRTKKTT Y YRDDLSKK          P PEIKKVKKRVRFADTEPVIIAITD EER  EEETEKKVVRITVKLTK+
Subjt:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKK---------NPSPEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQ

Query:  EANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN
        EANRMLSRCSDGGVL+FGDVACELMRIPATRVSSSM+AN
Subjt:  EANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN

TrEMBL top hitse value%identityAlignment
A0A0A0KYE1 Uncharacterized protein7.0e-4275.52Show/hide
Query:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKNPSP------------EIKKVKKRVRFADTEPVIIAI-TDTEERIKEEETEKKVVRITVK
        MISNLIS+LNKKLQAVEIS+R +RTKKT  Y YRD+L+KKN SP            EIKKVKKRVRFADTEPVIIAI TD EE   E ETEKKVVRITVK
Subjt:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKNPSP------------EIKKVKKRVRFADTEPVIIAI-TDTEERIKEEETEKKVVRITVK

Query:  LTKQEANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN
        LTKQEANRMLSRCS+GGVL+FGDVA ELMRIP TRV SS++AN
Subjt:  LTKQEANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN

A0A1S3BS40 uncharacterized protein LOC1034930981.8e-4276.92Show/hide
Query:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKNPSP------------EIKKVKKRVRFADTEPVIIAI-TDTEERIKEEETEKKVVRITVK
        MISNLIS+LNKKLQAVEISNR +RTKKTT Y YRDDL+KK  SP            EIKKVKKRVRFADTEPVIIAI TD EE  +EEETEKKVVRITVK
Subjt:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKNPSP------------EIKKVKKRVRFADTEPVIIAI-TDTEERIKEEETEKKVVRITVK

Query:  LTKQEANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN
        LTKQEANRMLSRCS+ GVL+FGDVA EL+RIP TRVSSS++AN
Subjt:  LTKQEANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN

A0A5D3D246 Uncharacterized protein1.8e-4276.92Show/hide
Query:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKNPSP------------EIKKVKKRVRFADTEPVIIAI-TDTEERIKEEETEKKVVRITVK
        MISNLIS+LNKKLQAVEISNR +RTKKTT Y YRDDL+KK  SP            EIKKVKKRVRFADTEPVIIAI TD EE  +EEETEKKVVRITVK
Subjt:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKNPSP------------EIKKVKKRVRFADTEPVIIAI-TDTEERIKEEETEKKVVRITVK

Query:  LTKQEANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN
        LTKQEANRMLSRCS+ GVL+FGDVA EL+RIP TRVSSS++AN
Subjt:  LTKQEANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSMLAN

A0A6J1EU86 uncharacterized protein LOC1114376084.8e-4382.84Show/hide
Query:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKN----PS---PEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQEA
        MI NLIS+LNKKLQAVEISNR RRTKKTTN  YR D+SKK     PS   PEI+KVKKRVRFADTEPVIIAI D EER  EEETEKKVVRITVKLTKQEA
Subjt:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKN----PS---PEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQEA

Query:  NRMLSRCSDGGVLDFGDVACELMRIPATRVSSSM
        NRMLSRCSDGGVL+FGDVA ELMRIPA RVSSSM
Subjt:  NRMLSRCSDGGVLDFGDVACELMRIPATRVSSSM

A0A6J1JBA8 uncharacterized protein LOC1114834368.2e-4381.62Show/hide
Query:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKK------NPS---PEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQ
        MI NLIS+LNKKLQAVEISNR RRTKKTTN  YR D+SKK      +PS   PEI+KVKKRVRFADTEPVIIAI D EER  EEETEKKVVRITVKLTKQ
Subjt:  MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKK------NPS---PEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQ

Query:  EANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSM
        EANRMLSRCSDGGVL+FGDVA ELMRIPA RVSSSM
Subjt:  EANRMLSRCSDGGVLDFGDVACELMRIPATRVSSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGCAACTTGATTTCAACCTTGAACAAAAAGCTGCAGGCTGTCGAAATTAGTAATCGCGGCAGACGAACGAAGAAGACCACTAATTACGCATACAGAGACGATCT
GAGCAAGAAGAACCCGTCGCCGGAGATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCCGACACAGAACCGGTGATAATCGCCATTACTGACACAGAGGAGCGGATTAAAG
AGGAGGAAACAGAGAAGAAAGTTGTGAGAATTACGGTGAAATTAACGAAACAAGAAGCGAATCGAATGCTTTCGAGGTGCTCCGATGGCGGCGTTCTCGATTTCGGAGAT
GTGGCTTGTGAACTCATGCGAATTCCTGCAACTCGAGTTAGTTCATCAATGTTGGCCAATTGA
mRNA sequenceShow/hide mRNA sequence
AAGATGGAGAGAAAAAGATTGAGTAAATTAAAAAAGAAAAAAAGATGTTACCAAACAATTTAAGTTTCAATTATGAATTAGCGAATAACATGGCTTTGAATTTTCAAGCA
TCTTCTTCCTCTATAAATAGTTCCTTTTTCCCTCTCTGTTTTCCTCACACAATCTCATCTCATCTCTCTTTCTCTCTATTACATCTGAAAAATCATGATCAGCAACTTGA
TTTCAACCTTGAACAAAAAGCTGCAGGCTGTCGAAATTAGTAATCGCGGCAGACGAACGAAGAAGACCACTAATTACGCATACAGAGACGATCTGAGCAAGAAGAACCCG
TCGCCGGAGATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCCGACACAGAACCGGTGATAATCGCCATTACTGACACAGAGGAGCGGATTAAAGAGGAGGAAACAGAGAA
GAAAGTTGTGAGAATTACGGTGAAATTAACGAAACAAGAAGCGAATCGAATGCTTTCGAGGTGCTCCGATGGCGGCGTTCTCGATTTCGGAGATGTGGCTTGTGAACTCA
TGCGAATTCCTGCAACTCGAGTTAGTTCATCAATGTTGGCCAATTGAGTTCCCCCCCCCTCCTCCCCCCCC
Protein sequenceShow/hide protein sequence
MISNLISTLNKKLQAVEISNRGRRTKKTTNYAYRDDLSKKNPSPEIKKVKKRVRFADTEPVIIAITDTEERIKEEETEKKVVRITVKLTKQEANRMLSRCSDGGVLDFGD
VACELMRIPATRVSSSMLAN