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Clc07G11650 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G11650
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEthylene-responsive transcription factor
Genome locationClcChr07:26416236..26418447
RNA-Seq ExpressionClc07G11650
SyntenyClc07G11650
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649074.1 hypothetical protein Csa_023806, partial [Cucumis sativus]6.7e-2356Show/hide
Query:  KSYRGVRKRQWGKWASEIHDPT--RKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGG
        K YRGVRKR WGK  S I+ P   ++KQLWIGSF+T E A  AYDAVA +F G KARLNFPE  HTLP FP + +V +IR +AR      A    GGGGG
Subjt:  KSYRGVRKRQWGKWASEIHDPT--RKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGG

Query:  GSISGVTE--LGLVDEEIISVENNP
         SISGVTE    L + +I S+E  P
Subjt:  GSISGVTE--LGLVDEEIISVENNP

KAG6751028.1 hypothetical protein POTOM_045545 [Populus tomentosa]4.8e-2139.74Show/hide
Query:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQ---SVGATAISESGG
        +S SYRGVRKR+WGKW SEI +P +K ++W+GSFET E A  AYD  A +FRG  A+LNFP+ VH+LP  P + S ++IR  A +   S+  + +  S G
Subjt:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQ---SVGATAISESGG

Query:  GGGGSISGVTELGLVDEEIISVENNPRVSIKSNPSGNGLCIPQSSRCLNNI
        G   S  G   + L   +I ++  +P  S +     +G+ +P+ S   +++
Subjt:  GGGGSISGVTELGLVDEEIISVENNPRVSIKSNPSGNGLCIPQSSRCLNNI

OMO88588.1 hypothetical protein CCACVL1_08304 [Corchorus capsularis]1.6e-2150.86Show/hide
Query:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQS-----VGATAISES
        +S SYRGVRKR+WGKW SEI +P +K ++W+GSFET E A  AYD  A +FRG +ARLNFPE ++ LP  P + + D+IR  A ++       A A SES
Subjt:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQS-----VGATAISES

Query:  GGGGGGSISGVTELGL
        GGGGG   +  +  GL
Subjt:  GGGGGGSISGVTELGL

XP_004152323.1 ethylene-responsive transcription factor ERF021 [Cucumis sativus]6.7e-2356Show/hide
Query:  KSYRGVRKRQWGKWASEIHDPT--RKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGG
        K YRGVRKR WGK  S I+ P   ++KQLWIGSF+T E A  AYDAVA +F G KARLNFPE  HTLP FP + +V +IR +AR      A    GGGGG
Subjt:  KSYRGVRKRQWGKWASEIHDPT--RKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGG

Query:  GSISGVTE--LGLVDEEIISVENNP
         SISGVTE    L + +I S+E  P
Subjt:  GSISGVTE--LGLVDEEIISVENNP

XP_006376158.1 ethylene-responsive transcription factor ERF021 [Populus trichocarpa]6.3e-2140.4Show/hide
Query:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQ---SVGATAISESGG
        +S SYRGVRKR+WGKW SEI +P +K ++W+GSFET E A  AYD  A +FRG  A+LNFP+ VH+LP  P +   ++IR  A +   S+  + +  S G
Subjt:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQ---SVGATAISESGG

Query:  GGGGSISGVTELGLVDEEIISVENNPRVSIKSNPSGNGLCIPQSSRCLNNI
        G   S  G   + L   +I ++  +P  S K     +G+ +P  S   ++I
Subjt:  GGGGSISGVTELGLVDEEIISVENNPRVSIKSNPSGNGLCIPQSSRCLNNI

TrEMBL top hitse value%identityAlignment
A0A0A0KTL4 AP2/ERF domain-containing protein3.2e-2356Show/hide
Query:  KSYRGVRKRQWGKWASEIHDPT--RKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGG
        K YRGVRKR WGK  S I+ P   ++KQLWIGSF+T E A  AYDAVA +F G KARLNFPE  HTLP FP + +V +IR +AR      A    GGGGG
Subjt:  KSYRGVRKRQWGKWASEIHDPT--RKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGG

Query:  GSISGVTE--LGLVDEEIISVENNP
         SISGVTE    L + +I S+E  P
Subjt:  GSISGVTE--LGLVDEEIISVENNP

A0A1R3J177 AP2/ERF domain-containing protein8.0e-2250.86Show/hide
Query:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQS-----VGATAISES
        +S SYRGVRKR+WGKW SEI +P +K ++W+GSFET E A  AYD  A +FRG +ARLNFPE ++ LP  P + + D+IR  A ++       A A SES
Subjt:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQS-----VGATAISES

Query:  GGGGGGSISGVTELGL
        GGGGG   +  +  GL
Subjt:  GGGGGGSISGVTELGL

A0A6P5WUP8 ethylene-responsive transcription factor ERF021-like4.0e-2145.38Show/hide
Query:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGG
        +S SYRGVRKR+WGKW SEI +P +K ++W+GSFETAE A  AYD  A +FRG +ARLN PE VH +P  P + S D+IR  A ++      + +G   G
Subjt:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGG

Query:  GS--ISGVTELGLVDEEIISVENNPRVSIK
         S  I+G   + L   +I ++  +P  S K
Subjt:  GS--ISGVTELGLVDEEIISVENNPRVSIK

B9MWI0 AP2/ERF domain-containing protein3.0e-2140.4Show/hide
Query:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQ---SVGATAISESGG
        +S SYRGVRKR+WGKW SEI +P +K ++W+GSFET E A  AYD  A +FRG  A+LNFP+ VH+LP  P +   ++IR  A +   S+  + +  S G
Subjt:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQ---SVGATAISESGG

Query:  GGGGSISGVTELGLVDEEIISVENNPRVSIKSNPSGNGLCIPQSSRCLNNI
        G   S  G   + L   +I ++  +P  S K     +G+ +P  S   ++I
Subjt:  GGGGSISGVTELGLVDEEIISVENNPRVSIKSNPSGNGLCIPQSSRCLNNI

B9T777 DNA binding protein, putative4.0e-2145.07Show/hide
Query:  SKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQS---VGATAISE----
        S  YRGVRKR+WGKW SEI +P +K ++W+GSFET E A  AYD  A YFRG +A+LNFP  VH LP+ P +P+ D+IR  A ++   + +  I E    
Subjt:  SKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQS---VGATAISE----

Query:  SGGGGGG--------SISGVTELGLVDEEIISVENNPRVSIK
        +GGGGGG        S+ G   + L   EI ++  +P  S K
Subjt:  SGGGGGG--------SISGVTELGLVDEEIISVENNPRVSIK

SwissProt top hitse value%identityAlignment
P93007 Ethylene-responsive transcription factor ERF1122.6e-1756.72Show/hide
Query:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPS
        ++YRGVR+R WGKWA+EI DP +  ++W+G+F+TAE A  AYD  AF FRG KA+LNFPE +   P+
Subjt:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPS

Q70II3 Ethylene-responsive transcription factor ERF1101.4e-1860.87Show/hide
Query:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFP
        + YRGVR+R WGKWA+EI DP R  ++W+G+F+TAE A RAYD  A  FRG+KA+LNFPE V  LP  P
Subjt:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFP

Q7G1L2 Ethylene-responsive transcription factor RAP2-66.1e-1967.19Show/hide
Query:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHT
        K YRGVR+R WGKWA+EI DP +  ++W+G+FETAE A RAYDA A  FRGSKA+LNFPE V T
Subjt:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHT

Q9C9I2 Ethylene-responsive transcription factor ERF0212.5e-2054.65Show/hide
Query:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQS
        V  +YRGVRKR+WGKW SEI +P  K ++W+GSFET E A  AYD  AF+FRG +ARLNFPE   +LP  P + S D IR    ++
Subjt:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQS

Q9LQ28 Ethylene-responsive transcription factor ERF0225.2e-1839.17Show/hide
Query:  SYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGGGSI
        SYRG+R+R+WGKW SEI +P +K ++W+GS+ETAE A  AYDA A + RG    LNFPE V + P  P++ S + I+  A+ +               S 
Subjt:  SYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGGGSI

Query:  SGVTELGLVDEEIISVENNP
         G++ +GL  ++I ++  +P
Subjt:  SGVTELGLVDEEIISVENNP

Arabidopsis top hitse value%identityAlignment
AT1G33760.1 Integrase-type DNA-binding superfamily protein3.7e-1939.17Show/hide
Query:  SYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGGGSI
        SYRG+R+R+WGKW SEI +P +K ++W+GS+ETAE A  AYDA A + RG    LNFPE V + P  P++ S + I+  A+ +               S 
Subjt:  SYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGGGSI

Query:  SGVTELGLVDEEIISVENNP
         G++ +GL  ++I ++  +P
Subjt:  SGVTELGLVDEEIISVENNP

AT1G43160.1 related to AP2 64.3e-2067.19Show/hide
Query:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHT
        K YRGVR+R WGKWA+EI DP +  ++W+G+FETAE A RAYDA A  FRGSKA+LNFPE V T
Subjt:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHT

AT1G71450.1 Integrase-type DNA-binding superfamily protein1.8e-2154.65Show/hide
Query:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQS
        V  +YRGVRKR+WGKW SEI +P  K ++W+GSFET E A  AYD  AF+FRG +ARLNFPE   +LP  P + S D IR    ++
Subjt:  VSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQS

AT2G33710.1 Integrase-type DNA-binding superfamily protein1.8e-1856.72Show/hide
Query:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPS
        ++YRGVR+R WGKWA+EI DP +  ++W+G+F+TAE A  AYD  AF FRG KA+LNFPE +   P+
Subjt:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPS

AT5G50080.1 ethylene response factor 1109.6e-2060.87Show/hide
Query:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFP
        + YRGVR+R WGKWA+EI DP R  ++W+G+F+TAE A RAYD  A  FRG+KA+LNFPE V  LP  P
Subjt:  KSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACCGTGTTTCAAAATCTTACAGAGGCGTGAGGAAGAGGCAGTGGGGGAAATGGGCATCGGAGATTCACGACCCGACCCGGAAGAAGCAGCTTTGGATA
GGGAGTTTCGAGACGGCGGAGACAGCGGTAAGGGCGTACGACGCCGTGGCCTTCTACTTCCGAGGCTCCAAGGCTCGTCTTAATTTTCCAGAAGCCGTTCACACT
CTCCCCTCATTCCCAGATAACCCAAGTGTGGATGAAATCCGGGAGGTGGCTCGCCAATCAGTGGGTGCAACCGCAATATCTGAAAGCGGCGGCGGAGGCGGAGGT
TCTATCTCCGGCGTGACGGAGTTGGGGTTAGTTGATGAGGAGATTATTTCAGTGGAGAATAATCCCAGAGTCAGCATTAAATCCAATCCCTCAGGGAATGGCCTT
TGTATTCCCCAGAGCTCCCGATGCTTGAACAATATTACGGATATCTCAATTTCTTGCTCCTCTATGATCCGTGAGGAGGATGCATTCAATGATAGCTTCACTCTT
CTTGATTTATTAGACTTTTCCCAACCAAGACTTTTGATGTGGCCTGCTTGTTTGTCCAAACACTTGCTCACATATTCTCCTGATATTGGTTTAGACTCTTCCTGG
GTGGAGGTCTCTCTCTACTCCACCTTTCGACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACCGTGTTTCAAAATCTTACAGAGGCGTGAGGAAGAGGCAGTGGGGGAAATGGGCATCGGAGATTCACGACCCGACCCGGAAGAAGCAGCTTTGGATA
GGGAGTTTCGAGACGGCGGAGACAGCGGTAAGGGCGTACGACGCCGTGGCCTTCTACTTCCGAGGCTCCAAGGCTCGTCTTAATTTTCCAGAAGCCGTTCACACT
CTCCCCTCATTCCCAGATAACCCAAGTGTGGATGAAATCCGGGAGGTGGCTCGCCAATCAGTGGGTGCAACCGCAATATCTGAAAGCGGCGGCGGAGGCGGAGGT
TCTATCTCCGGCGTGACGGAGTTGGGGTTAGTTGATGAGGAGATTATTTCAGTGGAGAATAATCCCAGAGTCAGCATTAAATCCAATCCCTCAGGGAATGGCCTT
TGTATTCCCCAGAGCTCCCGATGCTTGAACAATATTACGGATATCTCAATTTCTTGCTCCTCTATGATCCGTGAGGAGGATGCATTCAATGATAGCTTCACTCTT
CTTGATTTATTAGACTTTTCCCAACCAAGACTTTTGATGTGGCCTGCTTGTTTGTCCAAACACTTGCTCACATATTCTCCTGATATTGGTTTAGACTCTTCCTGG
GTGGAGGTCTCTCTCTACTCCACCTTTCGACTCTGA
Protein sequenceShow/hide protein sequence
MADRVSKSYRGVRKRQWGKWASEIHDPTRKKQLWIGSFETAETAVRAYDAVAFYFRGSKARLNFPEAVHTLPSFPDNPSVDEIREVARQSVGATAISESGGGGGG
SISGVTELGLVDEEIISVENNPRVSIKSNPSGNGLCIPQSSRCLNNITDISISCSSMIREEDAFNDSFTLLDLLDFSQPRLLMWPACLSKHLLTYSPDIGLDSSW
VEVSLYSTFRL