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Clc07G11730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G11730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionethylene-responsive transcription factor LEP-like
Genome locationClcChr07:26552311..26556061
RNA-Seq ExpressionClc07G11730
SyntenyClc07G11730
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152327.1 ethylene-responsive transcription factor LEP [Cucumis sativus]1.1e-0473.68Show/hide
Query:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTG-ADAFGF
        M+DWSTASSSS+SSFMGF+SN V P FPDT  +D FGF
Subjt:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTG-ADAFGF

XP_022956066.1 ethylene-responsive transcription factor LEP-like [Cucurbita moschata]8.5e-0570.73Show/hide
Query:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGFDRTT
        MIDW   SSSSSSSF+GFDSN  LPPFPD   DAFGFD ++
Subjt:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGFDRTT

XP_022980062.1 ethylene-responsive transcription factor LEP-like [Cucurbita maxima]2.5e-0475.68Show/hide
Query:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGF
        MIDW   SSSSSSSF+GFDSN  LPPFPDT  D+FGF
Subjt:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGF

XP_023528971.1 ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo]1.9e-0478.38Show/hide
Query:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGF
        MIDW   SSSSSSSF+GFDSN  LPPFPDT  DAFGF
Subjt:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGF

XP_038877958.1 ethylene-responsive transcription factor LEP-like [Benincasa hispida]2.2e-0878.57Show/hide
Query:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGFDRTTP
        MIDWSTAS SSSSSFM FDSN VLPPFPDT  DAFGF  ++P
Subjt:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGFDRTTP

TrEMBL top hitse value%identityAlignment
A0A0A0KYM7 AP2/ERF domain-containing protein5.4e-0573.68Show/hide
Query:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTG-ADAFGF
        M+DWSTASSSS+SSFMGF+SN V P FPDT  +D FGF
Subjt:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTG-ADAFGF

A0A1S3BXG1 ethylene-responsive transcription factor LEP-like3.5e-0473.68Show/hide
Query:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGAD-AFGF
        M+DWSTA  SSSSSFMGF+SN V PPFPDT +D +FGF
Subjt:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGAD-AFGF

A0A6J1GVK2 ethylene-responsive transcription factor LEP-like4.1e-0570.73Show/hide
Query:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGFDRTT
        MIDW   SSSSSSSF+GFDSN  LPPFPD   DAFGFD ++
Subjt:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGFDRTT

A0A6J1IQE0 ethylene-responsive transcription factor LEP-like1.2e-0475.68Show/hide
Query:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGF
        MIDW   SSSSSSSF+GFDSN  LPPFPDT  D+FGF
Subjt:  MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATTGGTCCACTGCCTCCTCCTCTTCCTCTTCCTCGTTTATGGGATTCGATTCAAACGTGGTTTTGCCACCCTTCCCTGACACCGGTGCCGACGCCTTCGGATT
CGATAGGACGACTCCTGCTTGTTTTTGTCGCTCGGCGGCCGACGGTTGTTACAGTCGGCGCTCTGCGTTCATGATACTGGGGTGGGCTTCATTGATATTAAGGTGGCAAA
GCGGTCGGGAATTGGCCCACGATGAATCCTATGTCCGAGGCACTTCAAGGCACATTGTCAGCCCTAAGATTTTGGGCAGTGAGTTCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGATTGGTCCACTGCCTCCTCCTCTTCCTCTTCCTCGTTTATGGGATTCGATTCAAACGTGGTTTTGCCACCCTTCCCTGACACCGGTGCCGACGCCTTCGGATT
CGATAGGACGACTCCTGCTTGTTTTTGTCGCTCGGCGGCCGACGGTTGTTACAGTCGGCGCTCTGCGTTCATGATACTGGGGTGGGCTTCATTGATATTAAGGTGGCAAA
GCGGTCGGGAATTGGCCCACGATGAATCCTATGTCCGAGGCACTTCAAGGCACATTGTCAGCCCTAAGATTTTGGGCAGTGAGTTCCGATGA
Protein sequenceShow/hide protein sequence
MIDWSTASSSSSSSFMGFDSNVVLPPFPDTGADAFGFDRTTPACFCRSAADGCYSRRSAFMILGWASLILRWQSGRELAHDESYVRGTSRHIVSPKILGSEFR