CuGenDBv2

Gene ID	Clc07G12010
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	SAM domain-containing protein
Genome location	ClcChr07:26850964..26851536
RNA-Seq Expression	Clc07G12010
Synteny	Clc07G12010
Gene Ontology terms	NA
InterPro domains	IPR013761 - Sterile alpha motif/pointed domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044466.1 uncharacterized protein E6C27_scaffold46G002020 [Cucumis melo var. makuwa]

9.3e-82

82.47

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Query:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D
        KSEMDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHH D
Subjt:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D

Query:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT
        Q ++SKALVLVPKS+YAAK+LKRNKTFSVGK QGRFLLTNGSPD  + +  RIQ FSGPILY++ +      E+K++GVEEIRWDAMFQNLKPT
Subjt:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT

XP_004152186.1 uncharacterized protein LOC101211300 [Cucumis sativus]

5.5e-82

81.96

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Query:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D
        KSEMDWFSWLS+T+LHPSLVYEYGLALA NELEHEDILYFNHEFLQSIGISIAKHRLEILKL  K+NALHPRPITR+LLALKKTKRRFANLIRNFTHH D
Subjt:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D

Query:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT
        Q ++SKALVLVPKS+YAAK+LKRNKTFSVGK QGRFLLTNGSPDP + +  RIQ FSGPILY+  +      E+K++GVEEIRWDAMFQNL+PT
Subjt:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT

XP_008454194.1 PREDICTED: uncharacterized protein LOC103494673 [Cucumis melo]

9.3e-82

82.47

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Query:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D
        KSEMDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHH D
Subjt:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D

Query:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT
        Q ++SKALVLVPKS+YAAK+LKRNKTFSVGK QGRFLLTNGSPD  + +  RIQ FSGPILY++ +      E+K++GVEEIRWDAMFQNLKPT
Subjt:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT

XP_022948497.1 uncharacterized protein LOC111452156 [Cucurbita moschata]

5.0e-75

77.08

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQFDD
        MDWFSWLSKTTL PSLVYEYGLAL+ NELE EDI+YFNHEFLQSIGISIAKHRLEILKLARKD ALHPRPITRLLLA+K+TKR FA LIRNF+ HD  DD
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQFDD

Query:  SKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAEEKED---------GVEEIRWDAMFQNLKPT
        SKALV+VPKSTY+ KLLKRNK   V KQQGRFLLTNGSP PG +WPRI++FSGP++Y+L  +EK++         GVEEIRWD MFQNLKPT
Subjt:  SKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAEEKED---------GVEEIRWDAMFQNLKPT

XP_038900622.1 uncharacterized protein LOC120087790 [Benincasa hispida]

4.9e-91

90.48

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFT--HHDQF
        MDWFSWLSKTTLHPSLVYEYGLALA NELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRF+NLIRNFT  HHDQ 
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFT--HHDQF

Query:  DDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAE----EKEDGVEEIRWDAMFQNLKPT
        DDSKALVLVPKS+YAAK LKRNKTFSVGK QGRFLLTNGSPDPG++WPRIQ FSGPILY+ PAE    EKEDGVEEIRWDAMFQ+LKPT
Subjt:  DDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAE----EKEDGVEEIRWDAMFQNLKPT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVK9 Uncharacterized protein

2.6e-82

81.96

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Query:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D
        KSEMDWFSWLS+T+LHPSLVYEYGLALA NELEHEDILYFNHEFLQSIGISIAKHRLEILKL  K+NALHPRPITR+LLALKKTKRRFANLIRNFTHH D
Subjt:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D

Query:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT
        Q ++SKALVLVPKS+YAAK+LKRNKTFSVGK QGRFLLTNGSPDP + +  RIQ FSGPILY+  +      E+K++GVEEIRWDAMFQNL+PT
Subjt:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT

A0A1S3BZ95 uncharacterized protein LOC103494673

4.5e-82

82.47

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Query:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D
        KSEMDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHH D
Subjt:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D

Query:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT
        Q ++SKALVLVPKS+YAAK+LKRNKTFSVGK QGRFLLTNGSPD  + +  RIQ FSGPILY++ +      E+K++GVEEIRWDAMFQNLKPT
Subjt:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT

A0A5A7TQT5 Uncharacterized protein

4.5e-82

82.47

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Query:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D
        KSEMDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHH D
Subjt:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D

Query:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT
        Q ++SKALVLVPKS+YAAK+LKRNKTFSVGK QGRFLLTNGSPD  + +  RIQ FSGPILY++ +      E+K++GVEEIRWDAMFQNLKPT
Subjt:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT

A0A5D3E0J4 Uncharacterized protein

4.5e-82

82.47

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Query:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D
        KSEMDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHH D
Subjt:  KSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHH-D

Query:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT
        Q ++SKALVLVPKS+YAAK+LKRNKTFSVGK QGRFLLTNGSPD  + +  RIQ FSGPILY++ +      E+K++GVEEIRWDAMFQNLKPT
Subjt:  QFDDSKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGL-MWPRIQAFSGPILYNLPA------EEKEDGVEEIRWDAMFQNLKPT

A0A6J1G9F1 uncharacterized protein LOC111452156

2.4e-75

77.08

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQFDD
        MDWFSWLSKTTL PSLVYEYGLAL+ NELE EDI+YFNHEFLQSIGISIAKHRLEILKLARKD ALHPRPITRLLLA+K+TKR FA LIRNF+ HD  DD
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQFDD

Query:  SKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAEEKED---------GVEEIRWDAMFQNLKPT
        SKALV+VPKSTY+ KLLKRNK   V KQQGRFLLTNGSP PG +WPRI++FSGP++Y+L  +EK++         GVEEIRWD MFQNLKPT
Subjt:  SKALVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAEEKED---------GVEEIRWDAMFQNLKPT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein

2.6e-42

47.55

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Query:  WFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHP----RPITRLLLALKKTKRRFANLIRNFTHHDQF
        WFSWLS+T L PSL++EYGL+ +QNELEHEDI YF+HEFLQS+GISIAKHRLEILKLAR+D    P    R I+R++ A+KKT++  ++ +R +   ++ 
Subjt:  WFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHP----RPITRLLLALKKTKRRFANLIRNFTHHDQF

Query:  D-DSKALVLVPKST------YAAKLLKRNKTFSVG-------KQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAEE-----KEDGVEEIRWDAMFQN
           S+ALVLVPK T      +    LKRNK   +        ++Q R LLTNG+P       RI +FS P++++   ++     ++   E+I+WD+MFQN
Subjt:  D-DSKALVLVPKST------YAAKLLKRNKTFSVG-------KQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAEE-----KEDGVEEIRWDAMFQN

Query:  LKPT
        LKPT
Subjt:  LKPT

AT1G80520.1 Sterile alpha motif (SAM) domain-containing protein

7.2e-40

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHP---RPITRLLLALKKTKRRFANLIRNFTHHDQ
        MDWFSWLS+T L  SL+YEYGL+ + NELE+EDI YFNHEFLQS+GISIAKHRLEILKLAR+D    P   R I R+L+A+KKT + F+  +R +   + 
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHP---RPITRLLLALKKTKRRFANLIRNFTHHDQ

Query:  FDDSKALVLVPKSTYAA-----KLLKRNK----TFSVGKQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAEE-----KEDGVEEIRWDAMFQNLKPT
         + S+ALV+V +ST ++     K  ++ +    +   G ++ R LLTNG+P       R+ +FS P + +   ++      +D  E+I+WD+MFQNLKPT
Subjt:  FDDSKALVLVPKSTYAA-----KLLKRNK----TFSVGKQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAEE-----KEDGVEEIRWDAMFQNLKPT

AT2G12462.1 BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1)

9.2e-19

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKD----NALHPRPITRLLLA--LKKTK
        MDWFSWLSKT L P+L YEYGL  AQ +L+ EDI  FNH FL+ +G+++ KHR+EILKL++++    ++ + RP++  L++  +K TK
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKD----NALHPRPITRLLLA--LKKTK

Sequences

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CDS sequence

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ATGAAAGGAGAAAAATCAGAGATGGATTGGTTCTCATGGCTTTCAAAAACAACTCTACATCCTTCTCTGGTGTACGAATACGGGCTTGCCCTAGCTCAAAACGAGCTCGA
ACACGAAGACATTCTCTATTTCAACCACGAATTCCTCCAGAGCATCGGAATCTCCATTGCCAAGCACCGACTCGAGATCCTCAAGCTCGCTCGTAAGGACAACGCCCTCC
ATCCTCGTCCCATCACTCGTCTTCTCCTCGCTCTCAAGAAGACCAAGCGCCGATTCGCGAATCTCATCCGAAATTTCACTCATCACGATCAATTCGATGATTCTAAAGCC
CTAGTTCTCGTCCCGAAATCAACCTACGCCGCTAAATTGCTCAAGAGGAACAAGACATTCTCCGTCGGTAAACAGCAGGGGAGGTTTCTTCTCACCAATGGAAGTCCGGA
TCCCGGTCTGATGTGGCCGCGTATTCAGGCCTTTTCGGGTCCCATTTTGTACAATCTACCGGCGGAGGAGAAGGAAGATGGCGTTGAGGAGATCAGGTGGGATGCAATGT
TTCAGAATTTGAAACCTACTTGA

mRNA sequence

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Protein sequence

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MKGEKSEMDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQFDDSKA
LVLVPKSTYAAKLLKRNKTFSVGKQQGRFLLTNGSPDPGLMWPRIQAFSGPILYNLPAEEKEDGVEEIRWDAMFQNLKPT

Clc07G12010 (gene) of Watermelon (cordophanus) v2 genome