; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G12110 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G12110
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionethylene-responsive transcription factor ERF003-like
Genome locationClcChr07:26926018..26927415
RNA-Seq ExpressionClc07G12110
SyntenyClc07G12110
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036532.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-6973.44Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM-
        MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNLPTNH+AP H LS+ PPSS LLTPTLI+KLQ+CR AS QM 
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM-

Query:  -----TKTQFALRKSADPTHRPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN
              KT F+ RKSA P+ R  T   DG      H+ ET+ KWVAGG+A+E+ RLEDDHVEQMIQELLDLGSFEFCPN+N   ++  STNN
Subjt:  -----TKTQFALRKSADPTHRPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN

XP_008454208.1 PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]1.1e-7685.29Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMT
        M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAATIMCC PNNL TNHSAP H S A PSSKLLTPTLI+KLQRCRMASLQMT
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMT

Query:  KTQFALRKSADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDNH
        K QFA+RKSADPT  PATKL  GHW E E +WV+  E EEVRRLEDDHVEQMIQELLDLGSFEFCPN+N+
Subjt:  KTQFALRKSADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDNH

XP_022949239.1 ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]1.3e-6973.96Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM-
        MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNLPTNH+AP H LS+ PPSS LLTPTLI+KLQ+CR AS QM 
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM-

Query:  -----TKTQFALRKSADPTHRPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN
              KT F+ RKSA P+ R  T   DG      H+ ET+ KWVAGGEA+E+ RLEDDHVEQMIQELLDLGSFEFCPN+N   ++  STNN
Subjt:  -----TKTQFALRKSADPTHRPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN

XP_023525763.1 ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo]6.4e-6973.44Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM-
        MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNLPTNH++P H LS+ PPSS LLTPTLI+KLQ+CR AS QM 
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM-

Query:  -----TKTQFALRKSADPTHRPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN
              KT F+ RKSA P+    T L+DG      H  ET+ KWVAGGEA+E+ RLEDDHVEQMIQELLDLGSFEFCPN+N   ++  STNN
Subjt:  -----TKTQFALRKSADPTHRPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN

XP_031740459.1 ethylene-responsive transcription factor ERF003 [Cucumis sativus]1.1e-7682.78Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMT
        M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAATIMCC PNNL TNHSA  H SSAP SSKLLTPT I+KLQRCRMASLQMT
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMT

Query:  KTQFALRKSADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN
        K QFA+RKSADPT  PATKL  GHW E   +WV   E EEVRRLED+HVEQMIQELLDLGSFEFCPN+N   H+FGSTNN
Subjt:  KTQFALRKSADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN

TrEMBL top hitse value%identityAlignment
A0A0A0KVJ4 AP2/ERF domain-containing protein5.3e-7782.78Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMT
        M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAATIMCC PNNL TNHSA  H SSAP SSKLLTPT I+KLQRCRMASLQMT
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMT

Query:  KTQFALRKSADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN
        K QFA+RKSADPT  PATKL  GHW E   +WV   E EEVRRLED+HVEQMIQELLDLGSFEFCPN+N   H+FGSTNN
Subjt:  KTQFALRKSADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN

A0A1S3BY29 ethylene-responsive transcription factor ERF003-like5.3e-7785.29Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMT
        M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAATIMCC PNNL TNHSAP H S A PSSKLLTPTLI+KLQRCRMASLQMT
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMT

Query:  KTQFALRKSADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDNH
        K QFA+RKSADPT  PATKL  GHW E E +WV+  E EEVRRLEDDHVEQMIQELLDLGSFEFCPN+N+
Subjt:  KTQFALRKSADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDNH

A0A6J1DIX5 ethylene-responsive transcription factor ERF003-like3.6e-5769.36Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPHLSSAP----PSSKLLTPTLIDKLQRCRMASL
        MARPQ +YRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNL +NH+APP  SS+     P SKLLTPTLIDKL++CRMAS 
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPHLSSAP----PSSKLLTPTLIDKLQRCRMASL

Query:  QMTKTQFALRKS-ADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN
        QM K +   +   +D + RPA KL  G         V   E +E  RLEDDHVEQMIQELLDLGSF FCPN+N
Subjt:  QMTKTQFALRKS-ADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN

A0A6J1GC95 ethylene-responsive transcription factor ERF003-like6.3e-7073.96Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM-
        MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNLPTNH+AP H LS+ PPSS LLTPTLI+KLQ+CR AS QM 
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM-

Query:  -----TKTQFALRKSADPTHRPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN
              KT F+ RKSA P+ R  T   DG      H+ ET+ KWVAGGEA+E+ RLEDDHVEQMIQELLDLGSFEFCPN+N   ++  STNN
Subjt:  -----TKTQFALRKSADPTHRPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN

A0A6J1KDM8 ethylene-responsive transcription factor ERF003-like1.0e-6772.25Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQM--
        MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNLPTN +AP H  SAPP S LLTPTLI+KLQ+CR AS QM  
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQM--

Query:  ----TKTQFALRKSADPTHRPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDNHNFG---STNN
             KT F+ RKSA P+    T L D       H+ ET+ KWVAG EA+E+ RLEDDHVEQMIQELLDLGSFEFCPN+N++     STNN
Subjt:  ----TKTQFALRKSADPTHRPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDNHNFG---STNN

SwissProt top hitse value%identityAlignment
P16146 Protein PPLZ022.1e-3069.9Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMC---CPNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQ
        MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAA +MC      N P N +A     S   SSKLL+ TLI KL RC MASLQ
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMC---CPNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQ

Query:  MTK
        MT+
Subjt:  MTK

Q3E958 Ethylene-responsive transcription factor SHINE 36.3e-1941.9Show/hide
Query:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIM---CCPNNLP---TNHSAPPHLSSAPPSSKLLTPTLIDKLQR-CRMASLQM
        +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA +M       N P   +N S    ++SA  S K L+  L  KL++ C+  +  +
Subjt:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIM---CCPNNLP---TNHSAPPHLSSAPPSSKLLTPTLIDKLQR-CRMASLQM

Query:  TKTQFALRKSADPTHRPATKLHDGHWSETEVKWV------------AGGEAE----EVRR---LEDDHVE-QMIQELLD
        T     LR   D +H    +   G  S+T   WV             GG+ E    +VR     EDD +  QMI+ELL+
Subjt:  TKTQFALRKSADPTHRPATKLHDGHWSETEVKWV------------AGGEAE----EVRR---LEDDHVE-QMIQELLD

Q94AW5 Ethylene-responsive transcription factor ERF0034.4e-4459.55Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCP---NNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQ
        MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA +MC P    N P N +A P       SSKLL+ TL  KL +C MASLQ
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCP---NNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQ

Query:  MTK-------TQFALRKSADPTHRPATKLH--DGHWSETEVKWVAGGE--AEEVRRLEDDHVEQMIQELLDLGSFEFC
        MTK       TQ A  +SAD     A + H   G    TE+KW  G     +  R LE+DH+EQMI+ELL  GS E C
Subjt:  MTK-------TQFALRKSADPTHRPATKLH--DGHWSETEVKWVAGGE--AEEVRRLEDDHVEQMIQELLDLGSFEFC

Q9LFN7 Ethylene-responsive transcription factor SHINE 22.4e-1843.94Show/hide
Query:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPTNHSAPPHLSSAPPSSKLLTPTLIDKL--QRCRMASLQMTK
        +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA +M   N   N P   S          +S L++P  + +L   + R +   +T 
Subjt:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPTNHSAPPHLSSAPPSSKLLTPTLIDKL--QRCRMASLQMTK

Query:  TQFALRKSADPTHRPATKLHDGHWSETEVKWV
        +   LR   D +H    +   G  S+T   WV
Subjt:  TQFALRKSADPTHRPATKLHDGHWSETEVKWV

Q9XI33 Ethylene-responsive transcription factor WIN12.8e-1938.69Show/hide
Query:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPTNHSAPPHLS------------SAPPSSKLLTPTLIDKLQR
        +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA +M   N   N P N++     S            S+  SS  L+  L  KL++
Subjt:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPTNHSAPPHLS------------SAPPSSKLLTPTLIDKLQR

Query:  -CRMASLQMTKTQFALRKSADPTH-----RPATKLHDGHW--------------------------SETEVKWVAGGEAEEVRRLEDDHVEQMIQELLD
         C+  S  +T     LR     +H     + A    D  W                            TEV+   GG  EEV   E+    QMI+ELL+
Subjt:  -CRMASLQMTKTQFALRKSADPTH-----RPATKLHDGHW--------------------------SETEVKWVAGGEAEEVRRLEDDHVEQMIQELLD

Arabidopsis top hitse value%identityAlignment
AT1G15360.1 Integrase-type DNA-binding superfamily protein2.0e-2038.69Show/hide
Query:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPTNHSAPPHLS------------SAPPSSKLLTPTLIDKLQR
        +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA +M   N   N P N++     S            S+  SS  L+  L  KL++
Subjt:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPTNHSAPPHLS------------SAPPSSKLLTPTLIDKLQR

Query:  -CRMASLQMTKTQFALRKSADPTH-----RPATKLHDGHW--------------------------SETEVKWVAGGEAEEVRRLEDDHVEQMIQELLD
         C+  S  +T     LR     +H     + A    D  W                            TEV+   GG  EEV   E+    QMI+ELL+
Subjt:  -CRMASLQMTKTQFALRKSADPTH-----RPATKLHDGHW--------------------------SETEVKWVAGGEAEEVRRLEDDHVEQMIQELLD

AT5G11190.1 Integrase-type DNA-binding superfamily protein1.7e-1943.94Show/hide
Query:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPTNHSAPPHLSSAPPSSKLLTPTLIDKL--QRCRMASLQMTK
        +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA +M   N   N P   S          +S L++P  + +L   + R +   +T 
Subjt:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPTNHSAPPHLSSAPPSSKLLTPTLIDKL--QRCRMASLQMTK

Query:  TQFALRKSADPTHRPATKLHDGHWSETEVKWV
        +   LR   D +H    +   G  S+T   WV
Subjt:  TQFALRKSADPTHRPATKLHDGHWSETEVKWV

AT5G25190.1 Integrase-type DNA-binding superfamily protein3.1e-4559.55Show/hide
Query:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCP---NNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQ
        MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA +MC P    N P N +A P       SSKLL+ TL  KL +C MASLQ
Subjt:  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCP---NNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQ

Query:  MTK-------TQFALRKSADPTHRPATKLH--DGHWSETEVKWVAGGE--AEEVRRLEDDHVEQMIQELLDLGSFEFC
        MTK       TQ A  +SAD     A + H   G    TE+KW  G     +  R LE+DH+EQMI+ELL  GS E C
Subjt:  MTK-------TQFALRKSADPTHRPATKLH--DGHWSETEVKWVAGGE--AEEVRRLEDDHVEQMIQELLDLGSFEFC

AT5G25390.1 Integrase-type DNA-binding superfamily protein2.1e-1740.78Show/hide
Query:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIM---CCPNNLP---TNHSAPPHLSSAPPSSKLLTPTLIDKLQR-CRMASLQM
        +++RGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA +M       N P   +N S    ++SA  S K L+  L  KL++ C+  +  +
Subjt:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIM---CCPNNLP---TNHSAPPHLSSAPPSSKLLTPTLIDKLQR-CRMASLQM

Query:  TKTQFALRKSADPTHRPATKLHDGHWSETEVKWV------------AGGEAE----EVRR---LEDDHVE-QMIQELLD
        T     LR   D +H    +   G  S+T   WV             GG+ E    +VR     EDD +  QMI+ELL+
Subjt:  TKTQFALRKSADPTHRPATKLHDGHWSETEVKWV------------AGGEAE----EVRR---LEDDHVE-QMIQELLD

AT5G25390.2 Integrase-type DNA-binding superfamily protein4.5e-2041.9Show/hide
Query:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIM---CCPNNLP---TNHSAPPHLSSAPPSSKLLTPTLIDKLQR-CRMASLQM
        +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA +M       N P   +N S    ++SA  S K L+  L  KL++ C+  +  +
Subjt:  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIM---CCPNNLP---TNHSAPPHLSSAPPSSKLLTPTLIDKLQR-CRMASLQM

Query:  TKTQFALRKSADPTHRPATKLHDGHWSETEVKWV------------AGGEAE----EVRR---LEDDHVE-QMIQELLD
        T     LR   D +H    +   G  S+T   WV             GG+ E    +VR     EDD +  QMI+ELL+
Subjt:  TKTQFALRKSADPTHRPATKLHDGHWSETEVKWV------------AGGEAE----EVRR---LEDDHVE-QMIQELLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGACCTCAACAACGCTATCGAGGAGTTCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCACCCTTTACTGAAGACAAGGATATGGCTGGGCACTTT
CGAAACGGCGGAAGACGCCGCCAGAGCATATGACGAAGCAGCTACAATTATGTGTTGCCCTAACAATCTCCCAACCAATCACAGTGCGCCACCTCACCTCTCGTCGGCGC
CGCCGTCGTCTAAGCTTCTAACTCCCACTTTGATCGACAAGTTGCAAAGATGTCGAATGGCTTCCCTCCAAATGACCAAAACCCAATTCGCCCTCCGGAAATCCGCCGAC
CCAACTCACCGTCCGGCCACCAAACTCCACGACGGTCACTGGTCGGAAACAGAGGTCAAGTGGGTCGCCGGTGGGGAGGCTGAGGAGGTCCGCCGGCTTGAAGACGACCA
CGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATGATAATCATAATTTTGGTTCTACAAATAATTAG
mRNA sequenceShow/hide mRNA sequence
CTTCTTCTCTCTCTCTCATTCTTTAATTTCTGTGTGTGTAAAATGGCAAGACCTCAACAACGCTATCGAGGAGTTCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGAT
TCGTCACCCTTTACTGAAGACAAGGATATGGCTGGGCACTTTCGAAACGGCGGAAGACGCCGCCAGAGCATATGACGAAGCAGCTACAATTATGTGTTGCCCTAACAATC
TCCCAACCAATCACAGTGCGCCACCTCACCTCTCGTCGGCGCCGCCGTCGTCTAAGCTTCTAACTCCCACTTTGATCGACAAGTTGCAAAGATGTCGAATGGCTTCCCTC
CAAATGACCAAAACCCAATTCGCCCTCCGGAAATCCGCCGACCCAACTCACCGTCCGGCCACCAAACTCCACGACGGTCACTGGTCGGAAACAGAGGTCAAGTGGGTCGC
CGGTGGGGAGGCTGAGGAGGTCCGCCGGCTTGAAGACGACCACGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATGATAATCATA
ATTTTGGTTCTACAAATAATTAG
Protein sequenceShow/hide protein sequence
MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMTKTQFALRKSAD
PTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDNHNFGSTNN