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Clc07G12310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G12310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationClcChr07:27122001..27122766
RNA-Seq ExpressionClc07G12310
SyntenyClc07G12310
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606797.1 EPIDERMAL PATTERNING FACTOR-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4282.24Show/hide
Query:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC
        M SPSNLLKLV+ +AVA + SLLLPLP  SAPA  G ESL KK VLGS+PPRC+GKCLNCRPC A+LVVPEHRERKGFEA+LNRREEDDSYYLLHWKCKC
Subjt:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

XP_022948690.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita moschata]5.9e-4383.18Show/hide
Query:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC
        M SPSNLLKLV+ +AVA + SLLLPLP  SAPA  G ESL KK VLGS+PPRC+GKCLNCRPCTA+LVVPEHRERKGFEA+LNRREEDDSYYLLHWKCKC
Subjt:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

XP_022998271.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita maxima]2.9e-4282.24Show/hide
Query:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC
        M SPSNLLKLV+ +AVA + SL LPLP  SAPA  G ESL KK VLGS+PPRC+GKCLNCRPCTA+LVVPEHRERKGFEA+LNRREEDDSYYLLHWKCKC
Subjt:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

XP_023525861.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita pepo subsp. pepo]4.5e-4384.11Show/hide
Query:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC
        M SPSNLLKLV+ +AVA + SLLLPLP  SAPA  G ESL KK VLGS+PPRCIGKCLNCRPCTA+LVVPEHRERKGFEA+LNRREEDDSYYLLHWKCKC
Subjt:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

XP_038876854.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Benincasa hispida]2.3e-4283.81Show/hide
Query:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPAGVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKCGN
        M SP ++LKLV  IA+AV+ SLLLPLPTSSA   +ESLQKK VLGS+PPRC+GKCLNCRPCTAALVVPEHRERKGFEANL+RREEDDSYYLLHWKCKCGN
Subjt:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPAGVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKCGN

Query:  KLYQP
        KLYQP
Subjt:  KLYQP

TrEMBL top hitse value%identityAlignment
A0A0A0KWT7 Epidermal patterning factor-like protein2.5e-3979.25Show/hide
Query:  MDSP-SNLLKLVVTIAVAVICSLLLPLPTSSAPAGVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKCG
        M SP +NLLKLVV +A AV+ SL L LPT S  A VESLQK+TVLGS+PPRC+GKCLNCRPCTAALVVPEHRE K FE NL+ REEDDSYYLLHWKCKCG
Subjt:  MDSP-SNLLKLVVTIAVAVICSLLLPLPTSSAPAGVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKCG

Query:  NKLYQP
        NKLYQP
Subjt:  NKLYQP

A0A1S3BZD4 Epidermal patterning factor-like protein1.8e-3778.5Show/hide
Query:  MDSPS-NLLKLVVTIAVAVICSLLLPLPTSSAPAGVE-SLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC
        M SPS NLLK VV +  A++ SLLL L T SA A VE SLQK+TVLGS+PPRC+GKCLNCRPCTAALVVPEH ERK FE NL+RREEDDSYYLLHWKCKC
Subjt:  MDSPS-NLLKLVVTIAVAVICSLLLPLPTSSAPAGVE-SLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

A0A5D3E1Z8 Epidermal patterning factor-like protein1.8e-3778.5Show/hide
Query:  MDSPS-NLLKLVVTIAVAVICSLLLPLPTSSAPAGVE-SLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC
        M SPS NLLK VV +  A++ SLLL L T SA A VE SLQK+TVLGS+PPRC+GKCLNCRPCTAALVVPEH ERK FE NL+RREEDDSYYLLHWKCKC
Subjt:  MDSPS-NLLKLVVTIAVAVICSLLLPLPTSSAPAGVE-SLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

A0A6J1GAL3 Epidermal patterning factor-like protein2.9e-4383.18Show/hide
Query:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC
        M SPSNLLKLV+ +AVA + SLLLPLP  SAPA  G ESL KK VLGS+PPRC+GKCLNCRPCTA+LVVPEHRERKGFEA+LNRREEDDSYYLLHWKCKC
Subjt:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

A0A6J1K9T3 Epidermal patterning factor-like protein1.4e-4282.24Show/hide
Query:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC
        M SPSNLLKLV+ +AVA + SL LPLP  SAPA  G ESL KK VLGS+PPRC+GKCLNCRPCTA+LVVPEHRERKGFEA+LNRREEDDSYYLLHWKCKC
Subjt:  MDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPA--GVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

SwissProt top hitse value%identityAlignment
Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 81.4e-0735.87Show/hide
Query:  VAVICSLLLPLPTSSAPAGVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDS--YYLLHWKCKCGNKLYQP
        VA I   LL L   S   G +   K++V+GSEPP C  KC NC+PC   L          F+      ++DDS  YY + W C+C +++++P
Subjt:  VAVICSLLLPLPTSSAPAGVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDS--YYLLHWKCKCGNKLYQP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.8e-0542.86Show/hide
Query:  LGSEPPRCIGKCLNCRPCTAALV-VPEHRERKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP
        LGS PPRC  KC  C PC    V VP                    YY   W+CKCGNKLY P
Subjt:  LGSEPPRCIGKCLNCRPCTAALV-VPEHRERKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 43.3e-0440.32Show/hide
Query:  GSEPPRCIGKCLNCRPCTAALVVPEHRE-RKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP
        GS PP C  KC  C+PC      P H   + G    L        YY   W+CKCGNKL+ P
Subjt:  GSEPPRCIGKCLNCRPCTAALVVPEHRE-RKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 55.6e-0440.98Show/hide
Query:  GSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP
        GS PP C  KC  C PC A  V  +     G    L        YY   W+CKCGNKL+ P
Subjt:  GSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 25.6e-0428.92Show/hide
Query:  LQKKTVLGSEPPRCIG-KCLNCRPCTAALVVPEHRERK--------------GFEANLNRREEDDSYYLLHWKCKCGNKLYQP
        +  + ++GS PPRC   +C +C  C  A+ VP + + K                  +  R ++  +Y  + WKCKCGN +Y P
Subjt:  LQKKTVLGSEPPRCIG-KCLNCRPCTAALVVPEHRERK--------------GFEANLNRREEDDSYYLLHWKCKCGNKLYQP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein1.0e-0835.87Show/hide
Query:  VAVICSLLLPLPTSSAPAGVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDS--YYLLHWKCKCGNKLYQP
        VA I   LL L   S   G +   K++V+GSEPP C  KC NC+PC   L          F+      ++DDS  YY + W C+C +++++P
Subjt:  VAVICSLLLPLPTSSAPAGVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDS--YYLLHWKCKCGNKLYQP

AT2G30370.1 allergen-related1.2e-0642.86Show/hide
Query:  LGSEPPRCIGKCLNCRPCTAALV-VPEHRERKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP
        LGS PPRC  KC  C PC    V VP                    YY   W+CKCGNKLY P
Subjt:  LGSEPPRCIGKCLNCRPCTAALV-VPEHRERKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP

AT2G30370.2 allergen-related1.2e-0642.86Show/hide
Query:  LGSEPPRCIGKCLNCRPCTAALV-VPEHRERKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP
        LGS PPRC  KC  C PC    V VP                    YY   W+CKCGNKLY P
Subjt:  LGSEPPRCIGKCLNCRPCTAALV-VPEHRERKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP

AT3G22820.1 allergen-related4.0e-0540.98Show/hide
Query:  GSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP
        GS PP C  KC  C PC A  V  +     G    L        YY   W+CKCGNKL+ P
Subjt:  GSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)2.3e-0540.32Show/hide
Query:  GSEPPRCIGKCLNCRPCTAALVVPEHRE-RKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP
        GS PP C  KC  C+PC      P H   + G    L        YY   W+CKCGNKL+ P
Subjt:  GSEPPRCIGKCLNCRPCTAALVVPEHRE-RKGFEANLNRREEDDSYYLLHWKCKCGNKLYQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACATTGCCACATAACTCTCCATTGAGCTCTATTTCTTCCTCTCATAAGTCACAGAGCTTCTCTCACAGAGCTCCAATGGATTCCCCAAGCAATCTTCTGAAACT
CGTCGTCACCATTGCCGTCGCCGTCATATGTTCCCTCTTGCTCCCTCTTCCCACATCATCAGCTCCGGCAGGCGTTGAGAGTTTGCAAAAGAAGACGGTGCTGGGATCGG
AACCGCCACGATGCATCGGAAAGTGCTTGAATTGTCGGCCTTGCACGGCGGCGTTGGTGGTGCCAGAGCACCGTGAAAGGAAGGGATTTGAAGCAAATTTGAATCGTAGA
GAAGAAGATGATAGCTATTATCTTCTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATGA
mRNA sequenceShow/hide mRNA sequence
CTTGGGATGAACACATTGCCACATAACTCTCCATTGAGCTCTATTTCTTCCTCTCATAAGTCACAGAGCTTCTCTCACAGAGCTCCAATGGATTCCCCAAGCAATCTTCT
GAAACTCGTCGTCACCATTGCCGTCGCCGTCATATGTTCCCTCTTGCTCCCTCTTCCCACATCATCAGCTCCGGCAGGCGTTGAGAGTTTGCAAAAGAAGACGGTGCTGG
GATCGGAACCGCCACGATGCATCGGAAAGTGCTTGAATTGTCGGCCTTGCACGGCGGCGTTGGTGGTGCCAGAGCACCGTGAAAGGAAGGGATTTGAAGCAAATTTGAAT
CGTAGAGAAGAAGATGATAGCTATTATCTTCTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATGACATTATGATGATGCTGTTTTTTCTTTTTCTTTCTT
TTTTTTAGACTTTCTTTGTAACTTCTTTTATCCCAATAATGGCGTTGGTTTATGTACAAAATTGAACATGTTTTAGCTTCTTTTCTACTCTGTTTTTCCTTCTCTGTTCT
TTAAATTTCTTGTTCTTCTATTTCATTTTTGTCTGCCTTGCTGGCTTTTTCCAAAATTTTTTAAATTGGAATGAAAAATTTGAGGACATAAAGTCTT
Protein sequenceShow/hide protein sequence
MNTLPHNSPLSSISSSHKSQSFSHRAPMDSPSNLLKLVVTIAVAVICSLLLPLPTSSAPAGVESLQKKTVLGSEPPRCIGKCLNCRPCTAALVVPEHRERKGFEANLNRR
EEDDSYYLLHWKCKCGNKLYQP