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Clc07G13070 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G13070
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein trichome birefringence-like
Genome locationClcChr07:27890602..27891289
RNA-Seq ExpressionClc07G13070
SyntenyClc07G13070
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
GO:0016413 - O-acetyltransferase activity (molecular function)
InterPro domainsIPR026057 - PC-Esterase
IPR029962 - Trichome birefringence-like family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149371.1 protein trichome birefringence-like 39 [Cucumis sativus]1.1e-3481.4Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MDMLIFNT HW TH G+SQ WDYIQD NRV+KDMN YVAYYKGL  WARWVNLNVDP KT VFFL ISPTH IGRDW QPTKSC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

XP_008466999.1 PREDICTED: protein trichome birefringence-like 39 [Cucumis melo]3.2e-3480.23Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MDMLIFNT HW TH G+SQ WDYIQD NRV+KDMN YVAYYKGL  WARWVNLNVDP +T VFFL ISPTH IGRDW QPTKSC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

XP_022149744.1 protein trichome birefringence-like 39 [Momordica charantia]8.3e-3582.56Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MDMLIFNT HW TH G+SQ WDYIQD NRVMKDMN YVAYYKGL  WARWVNLNVDP KT VFFL ISPTH IGRDW QPTKSC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

XP_023512589.1 protein trichome birefringence-like 39 [Cucurbita pepo subsp. pepo]3.5e-3376.74Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MDML+FNT HW TH G+SQ WDYIQD NRV+KDMN YVAYYKGL  WARWVNLNVDP KT VFFL ISPTH +GRDW QP +SC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

XP_038900997.1 protein trichome birefringence-like 39 [Benincasa hispida]4.9e-3582.56Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MDMLIFNT HW TH G+SQ WDYIQD NRVMKDMN YVAYYKGL  WARWVNLNVDP KT VFFL ISPTH IGRDW QPTKSC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

TrEMBL top hitse value%identityAlignment
A0A0A0KEH7 PMR5N domain-containing protein5.2e-3581.4Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MDMLIFNT HW TH G+SQ WDYIQD NRV+KDMN YVAYYKGL  WARWVNLNVDP KT VFFL ISPTH IGRDW QPTKSC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

A0A1S3CTT0 protein trichome birefringence-like 391.5e-3480.23Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MDMLIFNT HW TH G+SQ WDYIQD NRV+KDMN YVAYYKGL  WARWVNLNVDP +T VFFL ISPTH IGRDW QPTKSC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

A0A6J1D7Y2 protein trichome birefringence-like 394.0e-3582.56Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MDMLIFNT HW TH G+SQ WDYIQD NRVMKDMN YVAYYKGL  WARWVNLNVDP KT VFFL ISPTH IGRDW QPTKSC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

A0A6J1FXP7 protein trichome birefringence-like 393.8e-3375.58Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MDML+FNT HW TH G+SQ WDYIQD N+V+KDMN YVAYYKGL  WARWVNLNVDP KT VFFL ISPTH +GRDW QP +SC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

A0A6J1JCU6 protein trichome birefringence-like 391.7e-3376.74Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MDML+FNT HW TH G+SQ WDYIQD NRV+KDMN YVAYYKGL  WARWVNLNVDP KT VFFL ISPTH +GRDW QP +SC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

SwissProt top hitse value%identityAlignment
O22960 Protein trichome birefringence-like 371.1e-2148.42Show/hide
Query:  MDMLIFNTAHWRTHIGT-SQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFGIHISLPGN
        MD+L+FN+ HW TH G  SQ WD+I+D + +M+DM+   A+ KGL  W +WV+ NV+  +T VFF  ISPTH +GR+W +P K+C G    L G+
Subjt:  MDMLIFNTAHWRTHIGT-SQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFGIHISLPGN

Q67XC4 Protein trichome birefringence-like 406.2e-2555.81Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MD+LIFN+ HW TH    Q WDY+++ N++ KDMN  VAYYKGL  WARW+N N+ P +T VFF  +SP H  GR+W +P KSC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

Q8VY22 Protein trichome birefringence-like 382.1e-2558.14Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MD+L+FN+ HW TH G SQ WDYI+D + +++DMN   A+YKGL  WARWV+ NVD  KT VFF  ISPTH  GR+W +P K+C G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

Q9SIN2 Protein trichome birefringence-like 391.2e-2559.52Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSC
        MD+LIFN+ HW TH    Q WDY++D NR+ KDMN  VA+YKG+  WARWVN  VDP KT VFF  +SPTH  G+DW +P  SC
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSC

Q9ZV89 Protein trichome birefringence-like 426.0e-2040.22Show/hide
Query:  DMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFGIHISLPG
        D+ IFNT HW +H G ++ WDY Q  ++++K+MN   A+   L  W++W++ N+DP KT VF+  +SP H  G +W +P K+C G  + + G
Subjt:  DMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFGIHISLPG

Arabidopsis top hitse value%identityAlignment
AT1G29050.1 TRICHOME BIREFRINGENCE-LIKE 381.5e-2658.14Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MD+L+FN+ HW TH G SQ WDYI+D + +++DMN   A+YKGL  WARWV+ NVD  KT VFF  ISPTH  GR+W +P K+C G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

AT2G31110.1 Plant protein of unknown function (DUF828)4.4e-2655.81Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MD+LIFN+ HW TH    Q WDY+++ N++ KDMN  VAYYKGL  WARW+N N+ P +T VFF  +SP H  GR+W +P KSC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

AT2G31110.2 Plant protein of unknown function (DUF828)4.4e-2655.81Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG
        MD+LIFN+ HW TH    Q WDY+++ N++ KDMN  VAYYKGL  WARW+N N+ P +T VFF  +SP H  GR+W +P KSC G
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFG

AT2G34070.1 TRICHOME BIREFRINGENCE-LIKE 377.8e-2348.42Show/hide
Query:  MDMLIFNTAHWRTHIGT-SQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFGIHISLPGN
        MD+L+FN+ HW TH G  SQ WD+I+D + +M+DM+   A+ KGL  W +WV+ NV+  +T VFF  ISPTH +GR+W +P K+C G    L G+
Subjt:  MDMLIFNTAHWRTHIGT-SQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFGIHISLPGN

AT2G42570.1 TRICHOME BIREFRINGENCE-LIKE 398.9e-2759.52Show/hide
Query:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSC
        MD+LIFN+ HW TH    Q WDY++D NR+ KDMN  VA+YKG+  WARWVN  VDP KT VFF  +SPTH  G+DW +P  SC
Subjt:  MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGCTCATCTTCAACACTGCGCATTGGCGGACTCACATTGGAACTTCTCAGATGTGGGATTACATTCAAGACGAGAACAGAGTAATGAAGGACATGAATGGTTA
CGTGGCCTATTACAAAGGCCTCATCAATTGGGCCAGATGGGTTAATCTCAATGTCGATCCTTTCAAAACCATTGTCTTCTTCCTCAGAATCTCCCCCACACATTGCATTG
GCAGAGATTGGAGGCAGCCCACAAAATCCTGCTTCGGAATACACATCTCTCTGCCTGGGAATTTCGTCAACCGATTCACACAGTTCTGTTTGTTTTTCTTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
CTCTACCATTTTCTTCTCTCTTATACTCTCTCCTCCCTCTCCATTGCTAAACGCTTGGAAGGAAATGGACATGCTCATCTTCAACACTGCGCATTGGCGGACTCACATTG
GAACTTCTCAGATGTGGGATTACATTCAAGACGAGAACAGAGTAATGAAGGACATGAATGGTTACGTGGCCTATTACAAAGGCCTCATCAATTGGGCCAGATGGGTTAAT
CTCAATGTCGATCCTTTCAAAACCATTGTCTTCTTCCTCAGAATCTCCCCCACACATTGCATTGGCAGAGATTGGAGGCAGCCCACAAAATCCTGCTTCGGAATACACAT
CTCTCTGCCTGGGAATTTCGTCAACCGATTCACACAGTTCTGTTTGTTTTTCTTTTTTTAATGCGTAGGGAAGAAGAAGAAGAATACTCAAAGATTGGAAGGAGAGAGAG
GAAGAGATAATAAAGAGACCAGAATGAGAGAGGGAGAAAGAAGGGAGAGAGAAAATGAGAAAGGAGAGAAATATTAAAAAATAATTGTTTTCCAA
Protein sequenceShow/hide protein sequence
MDMLIFNTAHWRTHIGTSQMWDYIQDENRVMKDMNGYVAYYKGLINWARWVNLNVDPFKTIVFFLRISPTHCIGRDWRQPTKSCFGIHISLPGNFVNRFTQFCLFFFF