; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G13580 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G13580
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationClcChr07:28379166..28381575
RNA-Seq ExpressionClc07G13580
SyntenyClc07G13580
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146810.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus]2.0e-5087.61Show/hide
Query:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TTNRRSHVGVQYTNYEPE
        F+ ILQL CWVSAAAR FAPN AL PHKQQGLI    DSK+AVKGV EE FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP TTNRRSHVGVQYTNYEPE
Subjt:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TTNRRSHVGVQYTNYEPE

Query:  GWKCKCGPSFYSP
        GWKCKCGPSFYSP
Subjt:  GWKCKCGPSFYSP

XP_008447616.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo]3.7e-4985.84Show/hide
Query:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TTNRRSHVGVQYTNYEPE
        F+ ILQL CWVSAAARTFAPN ALLPHK QGLI    +SK+AVKG+ EE FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP TTNRRSH+GVQYTNYEPE
Subjt:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TTNRRSHVGVQYTNYEPE

Query:  GWKCKCGPSFYSP
        GWKCKCGPSFYSP
Subjt:  GWKCKCGPSFYSP

XP_022152671.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Momordica charantia]2.0e-4276.72Show/hide
Query:  FVLILQLA--CWVSAAARTFAPNHA--LLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNY
        F+L LQ+A  CWVSAA R FAPNHA  LLPHK QGLIS S DSKE  + VN     RGMR+IGSSPPSC+HKCYGC PCEAIQVPTT+R SH+GVQYTNY
Subjt:  FVLILQLA--CWVSAAARTFAPNHA--LLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNY

Query:  EPEGWKCKCGPSFYSP
        EPEGWKCKCGPSFYSP
Subjt:  EPEGWKCKCGPSFYSP

XP_023526549.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]1.7e-4176.32Show/hide
Query:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEP
        F+L LQLACWVSAA  TF    ALLPHKQQG    ++DS +AV+   V E   YRGMRKIGSSPPSCEHKCYGC PCEAIQVPT NRRSHVG+QYTNYEP
Subjt:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEP

Query:  EGWKCKCGPSFYSP
        EGWKCKCGPSFYSP
Subjt:  EGWKCKCGPSFYSP

XP_038904354.1 EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida]2.8e-5795.58Show/hide
Query:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPT-TNRRSHVGVQYTNYEPE
        F+LILQLACWVSAAARTFAPNHALLPHKQQGLIS SLDSKEA KGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPT TNR SHVGVQYTNYEPE
Subjt:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPT-TNRRSHVGVQYTNYEPE

Query:  GWKCKCGPSFYSP
        GWKCKCGPSFYSP
Subjt:  GWKCKCGPSFYSP

TrEMBL top hitse value%identityAlignment
A0A1S3BIS6 Epidermal patterning factor-like protein1.8e-4985.84Show/hide
Query:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TTNRRSHVGVQYTNYEPE
        F+ ILQL CWVSAAARTFAPN ALLPHK QGLI    +SK+AVKG+ EE FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP TTNRRSH+GVQYTNYEPE
Subjt:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TTNRRSHVGVQYTNYEPE

Query:  GWKCKCGPSFYSP
        GWKCKCGPSFYSP
Subjt:  GWKCKCGPSFYSP

A0A5D3BVF6 Epidermal patterning factor-like protein1.8e-4985.84Show/hide
Query:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TTNRRSHVGVQYTNYEPE
        F+ ILQL CWVSAAARTFAPN ALLPHK QGLI    +SK+AVKG+ EE FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP TTNRRSH+GVQYTNYEPE
Subjt:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TTNRRSHVGVQYTNYEPE

Query:  GWKCKCGPSFYSP
        GWKCKCGPSFYSP
Subjt:  GWKCKCGPSFYSP

A0A6J1DIF6 Epidermal patterning factor-like protein9.5e-4376.72Show/hide
Query:  FVLILQLA--CWVSAAARTFAPNHA--LLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNY
        F+L LQ+A  CWVSAA R FAPNHA  LLPHK QGLIS S DSKE  + VN     RGMR+IGSSPPSC+HKCYGC PCEAIQVPTT+R SH+GVQYTNY
Subjt:  FVLILQLA--CWVSAAARTFAPNHA--LLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNY

Query:  EPEGWKCKCGPSFYSP
        EPEGWKCKCGPSFYSP
Subjt:  EPEGWKCKCGPSFYSP

A0A6J1GTM4 Epidermal patterning factor-like protein6.8e-4175.44Show/hide
Query:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEP
        F+L LQLACWVSAA  TF    ALLPHKQQG    + DS +AV+   V     YRGMRKIGSSPPSCEHKCYGC PCEAIQVPT NRRSHVG+QYTNYEP
Subjt:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEP

Query:  EGWKCKCGPSFYSP
        EGWKCKCGPSFYSP
Subjt:  EGWKCKCGPSFYSP

A0A6J1IUG9 Epidermal patterning factor-like protein1.4e-4176.32Show/hide
Query:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEP
        F+L LQLACWVSAA  TF    ALLPHKQQG    + DS +AV+   V E   YRGMRKIGSSPPSCEHKCYGC PCEAIQVPT NRRSHVG+QYTNYEP
Subjt:  FVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEP

Query:  EGWKCKCGPSFYSP
        EGWKCKCGPSFYSP
Subjt:  EGWKCKCGPSFYSP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 38.7e-1757.38Show/hide
Query:  NEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGP
        N+E   +  R+IGS PPSCE KCYGC PCEAIQ PT +   H+   Y NY+PEGW+C C P
Subjt:  NEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 65.6e-0830.4Show/hide
Query:  ILVFVLILQLACWVSAAARTFAP-----NHALLPH---KQQGLISSSLDSKEAVKGVNEEA-FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSH
        +L+F ++  +A +      T +P     N   L +   K++G  +  +     +   ++EA   R +R +GSSPP C  KC  C PC+ + VP       
Subjt:  ILVFVLILQLACWVSAAARTFAP-----NHALLPH---KQQGLISSSLDSKEAVKGVNEEA-FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSH

Query:  VGVQYT-NYEPEGWKCKCGPSFYSP
         G   T  Y PE W+CKCG   Y P
Subjt:  VGVQYT-NYEPEGWKCKCGPSFYSP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 44.0e-0642.59Show/hide
Query:  GSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP
        GSSPP+C  KC  C PC+ + VP     S        Y PE W+CKCG   + P
Subjt:  GSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 12.1e-1042.11Show/hide
Query:  KIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSH--------------------VGVQYTNYEPEGWKCKCGPSFYSP
        ++GS+PPSC ++C  C PC AIQVPT   RS                     V  QY+NY+P GWKC C   FY+P
Subjt:  KIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSH--------------------VGVQYTNYEPEGWKCKCGPSFYSP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 52.0e-0540.74Show/hide
Query:  GSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP
        GS PP C  KC  C PC+A+ VP         +    Y PE W+CKCG   + P
Subjt:  GSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related5.2e-0942.42Show/hide
Query:  EEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYT-NYEPEGWKCKCGPSFYSP
        E    R +R +GSSPP C  KC  C PC+ + VP        G   T  Y PE W+CKCG   Y P
Subjt:  EEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYT-NYEPEGWKCKCGPSFYSP

AT2G30370.2 allergen-related4.0e-0930.4Show/hide
Query:  ILVFVLILQLACWVSAAARTFAP-----NHALLPH---KQQGLISSSLDSKEAVKGVNEEA-FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSH
        +L+F ++  +A +      T +P     N   L +   K++G  +  +     +   ++EA   R +R +GSSPP C  KC  C PC+ + VP       
Subjt:  ILVFVLILQLACWVSAAARTFAP-----NHALLPH---KQQGLISSSLDSKEAVKGVNEEA-FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSH

Query:  VGVQYT-NYEPEGWKCKCGPSFYSP
         G   T  Y PE W+CKCG   Y P
Subjt:  VGVQYT-NYEPEGWKCKCGPSFYSP

AT3G13898.1 unknown protein6.2e-1857.38Show/hide
Query:  NEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGP
        N+E   +  R+IGS PPSCE KCYGC PCEAIQ PT +   H+   Y NY+PEGW+C C P
Subjt:  NEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)2.9e-0742.59Show/hide
Query:  GSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP
        GSSPP+C  KC  C PC+ + VP     S        Y PE W+CKCG   + P
Subjt:  GSSPPSCEHKCYGCIPCEAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP

AT5G10310.1 unknown protein1.5e-1142.11Show/hide
Query:  KIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSH--------------------VGVQYTNYEPEGWKCKCGPSFYSP
        ++GS+PPSC ++C  C PC AIQVPT   RS                     V  QY+NY+P GWKC C   FY+P
Subjt:  KIGSSPPSCEHKCYGCIPCEAIQVPTTNRRSH--------------------VGVQYTNYEPEGWKCKCGPSFYSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGACAAAGCTTACTTGAAAACGTGCAATCGGTGCATTTGATCCTTAAAGTATGGCAGAGCCTAGAAAAAAAGGGGGGTGGCTGTTATGCTGGGGCCTGCCCTTG
TAGGGATCACTGTATTGGTTCATTTACTAGACTGATTTGGCACTCATTTCTTGCACTCTTGCAATTGCAAGGTTCTCTTCTCTATGTCCATGGTGAGTTGTCAAATGATA
TGAGGTGGAGTGGAGAGACTTTGCTTCGCTTTGCTTCAGAACTCTTTGATAAGAAAACTGGAATCGATCACTTGTTTGTAACGCAAAATCTCTTTGCCAGTCCTAAGCTA
GACCCTGGAAGAGTAAGAAACCAACAAAACAAAACAATATATATATGTATAGAGAGAGAGAGAGAGAGAGGCTCTGACTTCGGACATGAAAGCAGCATACTGGTTTTTGT
ATTGATTCTGCAATTAGCCTGTTGGGTTTCTGCTGCAGCCAGAACTTTTGCTCCAAATCATGCTCTCCTTCCTCATAAACAACAAGGTCTCATCTCAAGCTCTTTGGATT
CAAAGGAGGCTGTTAAAGGTGTAAATGAAGAAGCATTCTATAGAGGGATGAGGAAAATAGGGTCAAGTCCGCCGAGCTGTGAACACAAGTGCTATGGATGCATTCCATGT
GAAGCCATTCAAGTGCCTACCACCAACAGGCGCAGCCATGTGGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAGTGCAAGTGTGGCCCTTCTTTTTACAGCCC
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGACAAAGCTTACTTGAAAACGTGCAATCGGTGCATTTGATCCTTAAAGTATGGCAGAGCCTAGAAAAAAAGGGGGGTGGCTGTTATGCTGGGGCCTGCCCTTG
TAGGGATCACTGTATTGGTTCATTTACTAGACTGATTTGGCACTCATTTCTTGCACTCTTGCAATTGCAAGGTTCTCTTCTCTATGTCCATGGTGAGTTGTCAAATGATA
TGAGGTGGAGTGGAGAGACTTTGCTTCGCTTTGCTTCAGAACTCTTTGATAAGAAAACTGGAATCGATCACTTGTTTGTAACGCAAAATCTCTTTGCCAGTCCTAAGCTA
GACCCTGGAAGAGTAAGAAACCAACAAAACAAAACAATATATATATGTATAGAGAGAGAGAGAGAGAGAGGCTCTGACTTCGGACATGAAAGCAGCATACTGGTTTTTGT
ATTGATTCTGCAATTAGCCTGTTGGGTTTCTGCTGCAGCCAGAACTTTTGCTCCAAATCATGCTCTCCTTCCTCATAAACAACAAGGTCTCATCTCAAGCTCTTTGGATT
CAAAGGAGGCTGTTAAAGGTGTAAATGAAGAAGCATTCTATAGAGGGATGAGGAAAATAGGGTCAAGTCCGCCGAGCTGTGAACACAAGTGCTATGGATGCATTCCATGT
GAAGCCATTCAAGTGCCTACCACCAACAGGCGCAGCCATGTGGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAGTGCAAGTGTGGCCCTTCTTTTTACAGCCC
TTGA
Protein sequenceShow/hide protein sequence
MDGQSLLENVQSVHLILKVWQSLEKKGGGCYAGACPCRDHCIGSFTRLIWHSFLALLQLQGSLLYVHGELSNDMRWSGETLLRFASELFDKKTGIDHLFVTQNLFASPKL
DPGRVRNQQNKTIYICIERERERGSDFGHESSILVFVLILQLACWVSAAARTFAPNHALLPHKQQGLISSSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPC
EAIQVPTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP