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Clc07G13960 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G13960
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:28670263..28670843
RNA-Seq ExpressionClc07G13960
SyntenyClc07G13960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19187.1 uncharacterized protein E5676_scaffold522G001220 [Cucumis melo var. makuwa]1.8e-6277.02Show/hide
Query:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS
        MKKS S +YEM++TGFDDFD+GLNFS FLEEAK HA  Q  K AS EEETGRK LAQEKK+KKSWK+TLFSW KSD K+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT
        GP+Y+ ATT + RPRRRPMSGPI  LFNPSMRTE EIPYMCL Q + PN+NHNYGPIYLVT
Subjt:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT

XP_008460365.1 PREDICTED: uncharacterized protein LOC103499209 isoform X2 [Cucumis melo]9.0e-6276.4Show/hide
Query:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS
        MKKS S +YEM++TGFDDFD+GLNFS FLEEAK HA  Q  K AS EEE GRK LAQEKK+KKSWK+TLFSW KSD K+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT
        GP+Y+ ATT + RPRRRPMSGPI  LFNPSMRTE EIPYMCL Q + PN+NHNYGPIYLVT
Subjt:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT

XP_011651731.1 uncharacterized protein LOC101209455 [Cucumis sativus]1.0e-6578.88Show/hide
Query:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS
        MKKS+S +YEM++ GFDDFD+GLNFSKFLEEAK HA +Q FK AS EEET RKWLAQEKK+KKSWK+TLFSW KSD K+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT
        GPIY+ A TID RPRRRPMSGPI  LFNP+MRTE EIPYMCLHQ + PNTN NYGPIYLVT
Subjt:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT

XP_022152626.1 uncharacterized protein LOC111020302 [Momordica charantia]4.8e-6377.91Show/hide
Query:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFKA--STEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERN-PHTPNKRRVH
        M KSVSP+ EMDD GFD+FD  L+FSKFLEEAK HA  QDFKA  STEEE GRKWL QEKKSKKSWK+T+FSW KSD K+KPLPKPE N PHT +KR VH
Subjt:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFKA--STEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERN-PHTPNKRRVH

Query:  VSGPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT
        VSGPIYT A T D RPRRRP SGPI  LFNPSMRTEMEIPYMCLHQ T+PN++HNYGPIYLVT
Subjt:  VSGPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT

XP_038895377.1 uncharacterized protein LOC120083617 [Benincasa hispida]7.4e-7284.38Show/hide
Query:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFKASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVSG
        M KSVSP+YEMDD GFDD DL LNFSKFL+EAK HAIEQDFKASTEEETGRKWLAQEKKSKKSWK+TLFSW KS+ KTKP+PKPE+NPHTPNKRRVHVSG
Subjt:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFKASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVSG

Query:  PIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT
        PIYT ATT D+RPRR PMSGPI  LFNPSMRT+MEIPYM LHQ  TPN+NH YGPIYLVT
Subjt:  PIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT

TrEMBL top hitse value%identityAlignment
A0A0A0LC20 Uncharacterized protein5.0e-6678.88Show/hide
Query:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS
        MKKS+S +YEM++ GFDDFD+GLNFSKFLEEAK HA +Q FK AS EEET RKWLAQEKK+KKSWK+TLFSW KSD K+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT
        GPIY+ A TID RPRRRPMSGPI  LFNP+MRTE EIPYMCLHQ + PNTN NYGPIYLVT
Subjt:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT

A0A1S3CDK1 uncharacterized protein LOC103499209 isoform X24.4e-6276.4Show/hide
Query:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS
        MKKS S +YEM++TGFDDFD+GLNFS FLEEAK HA  Q  K AS EEE GRK LAQEKK+KKSWK+TLFSW KSD K+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT
        GP+Y+ ATT + RPRRRPMSGPI  LFNPSMRTE EIPYMCL Q + PN+NHNYGPIYLVT
Subjt:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT

A0A5A7UEH5 Uncharacterized protein4.4e-6276.4Show/hide
Query:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS
        MKKS S +YEM++TGFDDFD+GLNFS FLEEAK HA  Q  K AS EEE GRK LAQEKK+KKSWK+TLFSW KSD K+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT
        GP+Y+ ATT + RPRRRPMSGPI  LFNPSMRTE EIPYMCL Q + PN+NHNYGPIYLVT
Subjt:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT

A0A5D3D6L0 Uncharacterized protein8.8e-6377.02Show/hide
Query:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS
        MKKS S +YEM++TGFDDFD+GLNFS FLEEAK HA  Q  K AS EEETGRK LAQEKK+KKSWK+TLFSW KSD K+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT
        GP+Y+ ATT + RPRRRPMSGPI  LFNPSMRTE EIPYMCL Q + PN+NHNYGPIYLVT
Subjt:  GPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT

A0A6J1DIA9 uncharacterized protein LOC1110203022.3e-6377.91Show/hide
Query:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFKA--STEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERN-PHTPNKRRVH
        M KSVSP+ EMDD GFD+FD  L+FSKFLEEAK HA  QDFKA  STEEE GRKWL QEKKSKKSWK+T+FSW KSD K+KPLPKPE N PHT +KR VH
Subjt:  MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFKA--STEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERN-PHTPNKRRVH

Query:  VSGPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT
        VSGPIYT A T D RPRRRP SGPI  LFNPSMRTEMEIPYMCLHQ T+PN++HNYGPIYLVT
Subjt:  VSGPIYTAATTIDNRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATCTGTTTCTCCTGAATATGAGATGGACGATACTGGTTTTGATGATTTTGATCTTGGTCTCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACTCCATGCAAT
AGAACAAGATTTCAAGGCCTCCACAGAAGAAGAAACAGGAAGGAAATGGTTGGCACAAGAGAAAAAGAGCAAGAAATCATGGAAAAGCACACTCTTCTCGTGGTTTAAAA
GTGATAACAAGACCAAGCCTCTGCCTAAACCAGAAAGAAATCCTCACACACCCAATAAAAGACGTGTTCATGTTTCTGGTCCAATTTACACTGCAGCTACGACTATCGAT
AACAGACCCCGACGCCGTCCAATGTCTGGACCAATCCCTGGTCTCTTCAATCCTAGTATGAGAACAGAGATGGAGATCCCATATATGTGTCTCCACCAGTTTACTACCCC
CAATACCAATCATAATTATGGTCCAATTTATCTTGTTACATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATCTGTTTCTCCTGAATATGAGATGGACGATACTGGTTTTGATGATTTTGATCTTGGTCTCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACTCCATGCAAT
AGAACAAGATTTCAAGGCCTCCACAGAAGAAGAAACAGGAAGGAAATGGTTGGCACAAGAGAAAAAGAGCAAGAAATCATGGAAAAGCACACTCTTCTCGTGGTTTAAAA
GTGATAACAAGACCAAGCCTCTGCCTAAACCAGAAAGAAATCCTCACACACCCAATAAAAGACGTGTTCATGTTTCTGGTCCAATTTACACTGCAGCTACGACTATCGAT
AACAGACCCCGACGCCGTCCAATGTCTGGACCAATCCCTGGTCTCTTCAATCCTAGTATGAGAACAGAGATGGAGATCCCATATATGTGTCTCCACCAGTTTACTACCCC
CAATACCAATCATAATTATGGTCCAATTTATCTTGTTACATAG
Protein sequenceShow/hide protein sequence
MKKSVSPEYEMDDTGFDDFDLGLNFSKFLEEAKLHAIEQDFKASTEEETGRKWLAQEKKSKKSWKSTLFSWFKSDNKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTID
NRPRRRPMSGPIPGLFNPSMRTEMEIPYMCLHQFTTPNTNHNYGPIYLVT