; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G14330 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G14330
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSerine/arginine repetitive matrix protein 2
Genome locationClcChr07:28955530..28956143
RNA-Seq ExpressionClc07G14330
SyntenyClc07G14330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646378.1 hypothetical protein Csa_015587 [Cucumis sativus]6.3e-6383.23Show/hide
Query:  MSLSSLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP
        MSLS+LSK ++LTLTLNLLRP          LFRR FSSPSD +DLTDL ESP SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPP
Subjt:  MSLSSLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP

Query:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHEEG
        IANVL NLANPLSPEQSLSTTTVRGWPSSHYFI G HLPSL+PEV+TTS ECDAS DHEEG
Subjt:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHEEG

KAG7018211.1 hypothetical protein SDJN02_20079, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-6283.95Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP
        MSLS S S+S  LTLTLNLLRPR   L P  SL RR FSS S +NDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP
Subjt:  MSLS-SLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP

Query:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHEE
        IAN+LHN ANPLSPEQSLSTTTVRGWPSSH+FI G HLPSLEPEVET SAEC+AS   DHEE
Subjt:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHEE

XP_004135962.1 uncharacterized protein LOC101214133 [Cucumis sativus]6.3e-6383.23Show/hide
Query:  MSLSSLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP
        MSLS+LSK ++LTLTLNLLRP          LFRR FSSPSD +DLTDL ESP SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPP
Subjt:  MSLSSLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP

Query:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHEEG
        IANVL NLANPLSPEQSLSTTTVRGWPSSHYFI G HLPSL+PEV+TTS ECDAS DHEEG
Subjt:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHEEG

XP_022980733.1 uncharacterized protein LOC111480015 isoform X1 [Cucurbita maxima]1.4e-6283.95Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPRSRSL-FPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP
        MSLS S S+S  LTLTLNLLRPR R   FP  SL RR FSS +D NDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP
Subjt:  MSLS-SLSKSQALTLTLNLLRPRSRSL-FPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP

Query:  PIANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHE
        PIAN+LHN ANPLSPEQSLSTTTVRGWPSSH+FI G HLPSLEPEVET SAEC+AS   DHE
Subjt:  PIANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHE

XP_022980734.1 uncharacterized protein LOC111480015 isoform X2 [Cucurbita maxima]1.4e-6283.95Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPRSRSL-FPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP
        MSLS S S+S  LTLTLNLLRPR R   FP  SL RR FSS +D NDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP
Subjt:  MSLS-SLSKSQALTLTLNLLRPRSRSL-FPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP

Query:  PIANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHE
        PIAN+LHN ANPLSPEQSLSTTTVRGWPSSH+FI G HLPSLEPEVET SAEC+AS   DHE
Subjt:  PIANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHE

TrEMBL top hitse value%identityAlignment
A0A0A0K9L9 Uncharacterized protein3.0e-6383.23Show/hide
Query:  MSLSSLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP
        MSLS+LSK ++LTLTLNLLRP          LFRR FSSPSD +DLTDL ESP SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPP
Subjt:  MSLSSLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP

Query:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHEEG
        IANVL NLANPLSPEQSLSTTTVRGWPSSHYFI G HLPSL+PEV+TTS ECDAS DHEEG
Subjt:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHEEG

A0A6J1GVG9 uncharacterized protein LOC111457911 isoform X22.0e-6283.95Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP
        MSLS S S+S  LTLTLNLLRPR   L P  SL RR FSS S +NDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP
Subjt:  MSLS-SLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP

Query:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHEE
        IAN+LHN ANPLSPEQSLSTTTVRGWPSSH+FI G HLPSLEPEVET SAEC+AS   DHEE
Subjt:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHEE

A0A6J1GVQ5 uncharacterized protein LOC111457911 isoform X14.4e-6283.85Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP
        MSLS S S+S  LTLTLNLLRPR   L P  SL RR FSS S +NDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP
Subjt:  MSLS-SLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPP

Query:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHE
        IAN+LHN ANPLSPEQSLSTTTVRGWPSSH+FI G HLPSLEPEVET SAEC+AS   DHE
Subjt:  IANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHE

A0A6J1J031 uncharacterized protein LOC111480015 isoform X26.7e-6383.95Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPRSRSL-FPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP
        MSLS S S+S  LTLTLNLLRPR R   FP  SL RR FSS +D NDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP
Subjt:  MSLS-SLSKSQALTLTLNLLRPRSRSL-FPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP

Query:  PIANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHE
        PIAN+LHN ANPLSPEQSLSTTTVRGWPSSH+FI G HLPSLEPEVET SAEC+AS   DHE
Subjt:  PIANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHE

A0A6J1J062 uncharacterized protein LOC111480015 isoform X16.7e-6383.95Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPRSRSL-FPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP
        MSLS S S+S  LTLTLNLLRPR R   FP  SL RR FSS +D NDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP
Subjt:  MSLS-SLSKSQALTLTLNLLRPRSRSL-FPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLP

Query:  PIANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHE
        PIAN+LHN ANPLSPEQSLSTTTVRGWPSSH+FI G HLPSLEPEVET SAEC+AS   DHE
Subjt:  PIANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDAS--PDHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.1 unknown protein1.0e-2646.84Show/hide
Query:  SKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPI
        S S++L+L+       S SL P   L      S     DL ++     S+SP SDPL++ LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    I
Subjt:  SKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHE
        A ++  LANPL+ E+SLST +  GWPSS YF+ G     +E + ETTS     S D E
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHE

AT1G16840.2 unknown protein2.1e-2448.53Show/hide
Query:  SKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPI
        S S++L+L+       S SL P   L      S     DL ++     S+SP SDPL++ LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    I
Subjt:  SKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPH
        A ++  LANPL+ E+SLST +  GWPSS YF+ G +
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPH

AT1G16840.3 unknown protein1.0e-2646.84Show/hide
Query:  SKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPI
        S S++L+L+       S SL P   L      S     DL ++     S+SP SDPL++ LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    I
Subjt:  SKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHE
        A ++  LANPL+ E+SLST +  GWPSS YF+ G     +E + ETTS     S D E
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHE

AT1G16840.4 unknown protein1.0e-2646.84Show/hide
Query:  SKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPI
        S S++L+L+       S SL P   L      S     DL ++     S+SP SDPL++ LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    I
Subjt:  SKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHE
        A ++  LANPL+ E+SLST +  GWPSS YF+ G     +E + ETTS     S D E
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHE

AT1G78890.1 unknown protein8.5e-2646.94Show/hide
Query:  SLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSE-SPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPIAN
        SLS S+      +LL P S+++F    +  ++ +  S++N L  + E   ++DPL+  LEDA+ RI+VRRSAPDWLPFVPGAS+WVP P S SH   IA 
Subjt:  SLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSE-SPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPIAN

Query:  VLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSA
        ++  LANP+S E+S+S ++VRGWP S YFI G    S+E E+ + +A
Subjt:  VLHNLANPLSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCTCTTCTCTATCCAAATCCCAAGCTCTAACCCTAACCCTAAATCTCCTCCGTCCTCGTTCTCGTTCTCTATTTCCCTTTCACTCCCTCTTCCGCCGTGCTTT
CTCCTCCCCTTCCGATAACAACGATCTCACCGATCTCTCTGAATCTCCTTCCTCCGATCCCCTTCTTCGGAACCTTGAGGACGCTATTCAACGGATCCTCGTTCGCCGAT
CTGCCCCCGATTGGCTCCCCTTCGTTCCAGGCGCTTCGTATTGGGTTCCTCTGCCTTCTACTTCCCATTTACCTCCAATTGCCAACGTTCTTCACAACTTAGCTAACCCT
CTCTCTCCCGAACAATCCTTGTCTACCACTACCGTCCGTGGTTGGCCCTCTTCTCATTACTTCATTCATGGTCCCCATTTGCCTTCACTTGAGCCGGAGGTTGAGACTAC
GTCGGCGGAATGTGATGCTTCCCCTGACCACGAGGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCTCTTCTCTATCCAAATCCCAAGCTCTAACCCTAACCCTAAATCTCCTCCGTCCTCGTTCTCGTTCTCTATTTCCCTTTCACTCCCTCTTCCGCCGTGCTTT
CTCCTCCCCTTCCGATAACAACGATCTCACCGATCTCTCTGAATCTCCTTCCTCCGATCCCCTTCTTCGGAACCTTGAGGACGCTATTCAACGGATCCTCGTTCGCCGAT
CTGCCCCCGATTGGCTCCCCTTCGTTCCAGGCGCTTCGTATTGGGTTCCTCTGCCTTCTACTTCCCATTTACCTCCAATTGCCAACGTTCTTCACAACTTAGCTAACCCT
CTCTCTCCCGAACAATCCTTGTCTACCACTACCGTCCGTGGTTGGCCCTCTTCTCATTACTTCATTCATGGTCCCCATTTGCCTTCACTTGAGCCGGAGGTTGAGACTAC
GTCGGCGGAATGTGATGCTTCCCCTGACCACGAGGAAGGATGA
Protein sequenceShow/hide protein sequence
MSLSSLSKSQALTLTLNLLRPRSRSLFPFHSLFRRAFSSPSDNNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANVLHNLANP
LSPEQSLSTTTVRGWPSSHYFIHGPHLPSLEPEVETTSAECDASPDHEEG