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Clc07G14380 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G14380
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal protein L2
Genome locationClcChr07:28962939..28963445
RNA-Seq ExpressionClc07G14380
SyntenyClc07G14380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QEM01971.1 ribosomal protein L2 [Camellia sinensis var. assamica]6.9e-0496.15Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        QRKC TIEEFAPPRKILEPTTTTIRG
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
WP_131796642.1 hypothetical protein [Candidatus Frankia datiscae]1.8e-04100Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        QRKCKTIEEFAPPRKILEPTTTTIRG
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
YP_003587229.1 ribosomal protein L2 [Citrullus lanatus]1.8e-04100Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        QRKCKTIEEFAPPRKILEPTTTTIRG
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
YP_003587363.1 ribosomal protein L2 [Cucurbita pepo]1.8e-04100Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        QRKCKTIEEFAPPRKILEPTTTTIRG
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
YP_009913619.1 ribosomal protein L2 [Luffa acutangula]1.8e-04100Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        QRKCKTIEEFAPPRKILEPTTTTIRG
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
TrEMBL top hitse value%identityAlignment
A0A0M3ULW5 Ribosomal protein L23.3e-0496.15Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        QRKC TIEEFAPPRKILEPTTTTIRG
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
A0A7D5XZ32 Ribosomal protein L28.8e-05100Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        QRKCKTIEEFAPPRKILEPTTTTIRG
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
B6VJV4 Ribosomal protein L23.3e-0496.15Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        QRKC TIEEFAPPRKILEPTTTTIRG
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
D5I399 Ribosomal protein L28.8e-05100Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        QRKCKTIEEFAPPRKILEPTTTTIRG
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
D5I3E9 Ribosomal protein L28.8e-05100Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        QRKCKTIEEFAPPRKILEPTTTTIRG
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07715.1 Nucleic acid-binding, OB-fold-like protein1.1e-0476.92Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        Q+K  TIE+FAPPRKILEPTT TI G
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG
ATMG00560.1 Nucleic acid-binding, OB-fold-like protein1.1e-0476.92Show/hide
Query:  QRKCKTIEEFAPPRKILEPTTTTIRG
        Q+K  TIE+FAPPRKILEPTT TI G
Subjt:  QRKCKTIEEFAPPRKILEPTTTTIRG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAGCCTATGTTCAAACCAAACCCACCCCTATTTGTTTGTTTGAATAAGGCTAGAAAGAATGCCCGCCAAGTTCAGATAAGGAAATGCTTCCCCCAGCACGAGGT
GCAAGCTTCTGACGTAGCTGGGCAGGTATATGAGTATAGCATAAAAAAGAAGTATAAGACTTTCATAATCTGGTGGCGATCCAAACAGACACTGATCTCGAGTAATATTG
CCAAGCACAGAGGAAGGCGGGTCTTCTTCAGTCCGCTTGGAAAGCGTTATTATATCTTTTTCCAAAGTACCCTGTGCTTTCATTTTCGCTCTCCCACCTGCCTGGGCGAT
GGAATACTGATAAAGAGTCCAAGGGCTCCAGAGACTCATCCGCGAGAAAAGGCATATAAATTGTTTACTCGAGGGGATAATAGCCAGAGGAAATGCAAGACAATAGAGGA
GTTCGCTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACCATCCGCGGTGCGCTAATTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAGCCTATGTTCAAACCAAACCCACCCCTATTTGTTTGTTTGAATAAGGCTAGAAAGAATGCCCGCCAAGTTCAGATAAGGAAATGCTTCCCCCAGCACGAGGT
GCAAGCTTCTGACGTAGCTGGGCAGGTATATGAGTATAGCATAAAAAAGAAGTATAAGACTTTCATAATCTGGTGGCGATCCAAACAGACACTGATCTCGAGTAATATTG
CCAAGCACAGAGGAAGGCGGGTCTTCTTCAGTCCGCTTGGAAAGCGTTATTATATCTTTTTCCAAAGTACCCTGTGCTTTCATTTTCGCTCTCCCACCTGCCTGGGCGAT
GGAATACTGATAAAGAGTCCAAGGGCTCCAGAGACTCATCCGCGAGAAAAGGCATATAAATTGTTTACTCGAGGGGATAATAGCCAGAGGAAATGCAAGACAATAGAGGA
GTTCGCTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACCATCCGCGGTGCGCTAATTCTCTGA
Protein sequenceShow/hide protein sequence
MFEPMFKPNPPLFVCLNKARKNARQVQIRKCFPQHEVQASDVAGQVYEYSIKKKYKTFIIWWRSKQTLISSNIAKHRGRRVFFSPLGKRYYIFFQSTLCFHFRSPTCLGD
GILIKSPRAPETHPREKAYKLFTRGDNSQRKCKTIEEFAPPRKILEPTTTTIRGALIL