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Clc07G14480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G14480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal protein-like protein
Genome locationClcChr07:29061934..29062386
RNA-Seq ExpressionClc07G14480
SyntenyClc07G14480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148109.1 uncharacterized protein LOC111016865 [Momordica charantia]2.0e-5882Show/hide
Query:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK
        MGE  SP  PNSLPQ NSTATPM+SS T RRK P+PQEL+SHYESQGL SHDASIKVIEDLQNALFRI+SSGRGKKDKLLVETS+KID+T +R+A+LDLK
Subjt:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS
        LDSKPGYAETFA+GLASGSVL G+G+VMPHVFGAL +IWSSV+N TKHSS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS

XP_022955496.1 uncharacterized protein LOC111457504 [Cucurbita moschata]1.4e-5983.44Show/hide
Query:  MGESHSPAPPNSLPQDNSTATPMTSS-ATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDL
        M +S+SPA  NSLPQDN+TATPM SS    RRK PSPQEL+SHYESQGLTSHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKID+TN RLA+LDL
Subjt:  MGESHSPAPPNSLPQDNSTATPMTSS-ATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS
        KLDSKPGYA+TFALGLASGSVLNGIGAVMPHVFGA+ +IWSSV+  TKHSS
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS

XP_022980748.1 uncharacterized protein LOC111480022 [Cucurbita maxima]3.2e-6184.67Show/hide
Query:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK
        M +S+SPA  NSLPQDN+TATPM SS   RRK PSPQEL+SHYESQGLTSHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKID+TN RLA+LDLK
Subjt:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS
        LDSKPGYA+TFALGLASGSVLNGIGAVMPHVFGAL +IWSSV+  TKHSS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS

XP_023527033.1 uncharacterized protein LOC111790380 [Cucurbita pepo subsp. pepo]8.8e-5983.44Show/hide
Query:  MGESHSPAPPNSLPQDNSTATPMTSS-ATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDL
        M +S+SPA  NSL QDN+TATPM SS    RRK PSPQEL+SHYESQGLTSHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKID+TN RLA+LDL
Subjt:  MGESHSPAPPNSLPQDNSTATPMTSS-ATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS
        KLDSKPGYA+TFALGLASGSVLNGIGAVMPHVFGAL +IWSSV+  TKHSS
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS

XP_038893730.1 uncharacterized protein LOC120082569 [Benincasa hispida]1.2e-6892.67Show/hide
Query:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK
        MGESHS APPNSLPQDNSTA PMTSS T RRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKID+TNNRLA+LDLK
Subjt:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS
        LDSKPGYAE+FALGLASGSVL+GIG VMPHVFGALT+IWSSV+NLTKHSS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS

TrEMBL top hitse value%identityAlignment
A0A1S4DV46 uncharacterized protein LOC1034875371.2e-5883.22Show/hide
Query:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK
        M +S SPAPPNSLPQ     +P   S   RRKPPSPQELISHYESQG TSHDASIKVI+DLQNALF+IISSGRGKKDKLL+ETSRKID+TN+RLA+LDLK
Subjt:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHS
        LDSKPGYAETFALGLASGSVLNG+G VMPHVFGALT+IWSSVTNLTKHS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHS

A0A5A7VAF7 Putative ribosomal-like protein1.2e-5883.22Show/hide
Query:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK
        M +S SPAPPNSLPQ     +P   S   RRKPPSPQELISHYESQG TSHDASIKVI+DLQNALF+IISSGRGKKDKLL+ETSRKID+TN+RLA+LDLK
Subjt:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHS
        LDSKPGYAETFALGLASGSVLNG+G VMPHVFGALT+IWSSVTNLTKHS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHS

A0A6J1D308 uncharacterized protein LOC1110168659.5e-5982Show/hide
Query:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK
        MGE  SP  PNSLPQ NSTATPM+SS T RRK P+PQEL+SHYESQGL SHDASIKVIEDLQNALFRI+SSGRGKKDKLLVETS+KID+T +R+A+LDLK
Subjt:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS
        LDSKPGYAETFA+GLASGSVL G+G+VMPHVFGAL +IWSSV+N TKHSS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS

A0A6J1GTX5 uncharacterized protein LOC1114575046.5e-6083.44Show/hide
Query:  MGESHSPAPPNSLPQDNSTATPMTSS-ATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDL
        M +S+SPA  NSLPQDN+TATPM SS    RRK PSPQEL+SHYESQGLTSHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKID+TN RLA+LDL
Subjt:  MGESHSPAPPNSLPQDNSTATPMTSS-ATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS
        KLDSKPGYA+TFALGLASGSVLNGIGAVMPHVFGA+ +IWSSV+  TKHSS
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS

A0A6J1J075 uncharacterized protein LOC1114800221.6e-6184.67Show/hide
Query:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK
        M +S+SPA  NSLPQDN+TATPM SS   RRK PSPQEL+SHYESQGLTSHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKID+TN RLA+LDLK
Subjt:  MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS
        LDSKPGYA+TFALGLASGSVLNGIGAVMPHVFGAL +IWSSV+  TKHSS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16790.1 ribosomal protein-related4.8e-3153.42Show/hide
Query:  PAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGR--GKKDKLLVETSRKIDSTNNRLALLDLKLDSK
        PA PN+  +  S     +      +K P+P ELISHY+ +GL   +ASIKVIEDLQNAL R++SS R    KDKL+ + +RKID+ N RLA++D KL++K
Subjt:  PAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGR--GKKDKLLVETSRKIDSTNNRLALLDLKLDSK

Query:  PGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS
        PGY ETFALGLASG+ LNGI AV PHV   +  IWS+V   T  SS
Subjt:  PGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAATCACATTCACCAGCGCCTCCAAATTCTCTTCCCCAAGACAACAGTACTGCAACCCCCATGACGTCTTCAGCAACCCTAAGAAGAAAGCCTCCTTCCCCACA
GGAACTCATATCCCACTACGAATCCCAAGGCCTTACTTCTCATGATGCTTCAATCAAGGTAATAGAAGACCTTCAGAATGCTCTCTTCAGGATCATCTCCTCCGGCAGAG
GCAAAAAGGACAAGCTTCTGGTCGAGACCTCAAGGAAGATCGATTCTACCAATAATCGTCTTGCCCTTCTCGACTTAAAGTTGGATTCCAAGCCAGGCTATGCCGAGACT
TTTGCCCTAGGCTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGGGCTGTGATGCCCCATGTTTTTGGGGCTCTCACCCATATTTGGAGCTCTGTTACTAATCTTACCAA
GCATTCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAATCACATTCACCAGCGCCTCCAAATTCTCTTCCCCAAGACAACAGTACTGCAACCCCCATGACGTCTTCAGCAACCCTAAGAAGAAAGCCTCCTTCCCCACA
GGAACTCATATCCCACTACGAATCCCAAGGCCTTACTTCTCATGATGCTTCAATCAAGGTAATAGAAGACCTTCAGAATGCTCTCTTCAGGATCATCTCCTCCGGCAGAG
GCAAAAAGGACAAGCTTCTGGTCGAGACCTCAAGGAAGATCGATTCTACCAATAATCGTCTTGCCCTTCTCGACTTAAAGTTGGATTCCAAGCCAGGCTATGCCGAGACT
TTTGCCCTAGGCTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGGGCTGTGATGCCCCATGTTTTTGGGGCTCTCACCCATATTTGGAGCTCTGTTACTAATCTTACCAA
GCATTCTTCTTGA
Protein sequenceShow/hide protein sequence
MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAET
FALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS