; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G14630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G14630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionarabinogalactan peptide 22-like
Genome locationClcChr07:29219334..29220797
RNA-Seq ExpressionClc07G14630
SyntenyClc07G14630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577157.1 Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2591.55Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF
        MAVSR SFGF+AA AL+FAIFLPVAQP SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLSNSF
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF

XP_022136454.1 arabinogalactan peptide 22-like [Momordica charantia]3.9e-2590.14Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF
        MAVSRASFGF+AA AL+FAIFLPVA PHSL PAPAP+SDGTSIDQGIAYVLM+VALALTYLIHNADLSNSF
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF

XP_022931316.1 arabinogalactan peptide 22-like [Cucurbita moschata]2.3e-2591.55Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF
        MAVSR SFGF+AA AL+FAIFLPVAQP SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLSNSF
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF

XP_022985432.1 arabinogalactan peptide 20 [Cucurbita maxima]8.7e-2590.14Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF
        MAVSR SFGF+AA AL+FAIFLPVAQP SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLS+SF
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF

XP_038882280.1 arabinogalactan protein 22-like [Benincasa hispida]2.1e-2694.37Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF
        MAVS ASFGFLAA AL+FAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSN+F
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF

TrEMBL top hitse value%identityAlignment
A0A0A0KZS8 Uncharacterized protein2.7e-2494.03Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSR+SFG LAATAL+FAIFLPVA PHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

A0A5D3CYF3 Arabinogalactan peptide 22-like1.8e-2390Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNS
        MAVSR+SF  LAATAL+FAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSN+
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNS

A0A6J1C4C2 arabinogalactan peptide 22-like1.9e-2590.14Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF
        MAVSRASFGF+AA AL+FAIFLPVA PHSL PAPAP+SDGTSIDQGIAYVLM+VALALTYLIHNADLSNSF
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF

A0A6J1ETC6 arabinogalactan peptide 22-like1.1e-2591.55Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF
        MAVSR SFGF+AA AL+FAIFLPVAQP SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLSNSF
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF

A0A6J1J4V7 arabinogalactan peptide 204.2e-2590.14Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF
        MAVSR SFGF+AA AL+FAIFLPVAQP SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLS+SF
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 163.2e-1463.24Show/hide
Query:  SRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF
        SR S    A  + +FA+ L +A   SLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH  D S+S+
Subjt:  SRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF

Q8L9T8 Arabinogalactan protein 411.1e-1466.67Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        M+ SR  FG     +++FAI LP+A   S APAPAPTSDGT+IDQGIAYVLM+VAL LTYLIH
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

Q9FK16 Arabinogalactan protein 224.2e-1466.67Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        MA  +     LA   ++  I LP+AQ HS +PAPAPTSDGTSIDQGIAYVLMMVALALTY IH
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

Q9M373 Arabinogalactan protein 201.1e-1464.18Show/hide
Query:  SRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNS
        SR S   +A  A +FA+  P A   SLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S+S
Subjt:  SRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNS

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 162.3e-1563.24Show/hide
Query:  SRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF
        SR S    A  + +FA+ L +A   SLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH  D S+S+
Subjt:  SRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF

AT3G61640.1 arabinogalactan protein 207.9e-1664.18Show/hide
Query:  SRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNS
        SR S   +A  A +FA+  P A   SLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S+S
Subjt:  SRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNS

AT5G24105.1 arabinogalactan protein 417.9e-1666.67Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        M+ SR  FG     +++FAI LP+A   S APAPAPTSDGT+IDQGIAYVLM+VAL LTYLIH
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

AT5G53250.1 arabinogalactan protein 223.0e-1566.67Show/hide
Query:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        MA  +     LA   ++  I LP+AQ HS +PAPAPTSDGTSIDQGIAYVLMMVALALTY IH
Subjt:  MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCGAGGGCCTCTTTTGGATTTTTGGCTGCCACCGCTCTCCTCTTTGCCATCTTCTTGCCGGTTGCTCAGCCTCATTCCTTGGCTCCGGCACCCGCTCCCAC
CAGCGATGGGACATCCATAGACCAAGGGATAGCGTATGTGTTAATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCCAACAGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAGAAAAGAATAAAGAATAAAAAGGTAACCCTATAAAATGGCACTCCTTCGAAGATTTGGTTTCCTCCGTCTCCCATCGGTAGACTGCCTCTGTTTCCGTTT
AGAGATTTCCTTTAATCGTCTCCTTCATTTCCTTATTCATTCCAAGAGGGAAAGGGAGATTCCTTTCTCTCTCTGCGACCCTCTTCAAGCCATTGGAACAAGAAGTCCCT
GAAAGCTTCTTGATCTCACACACCCATCGCAGAGAGAGATCCACCCTCGCTTCTACTTTCTTCCCATTCCGAGTCCAATGGCGGTTTCGAGGGCCTCTTTTGGATTTTTG
GCTGCCACCGCTCTCCTCTTTGCCATCTTCTTGCCGGTTGCTCAGCCTCATTCCTTGGCTCCGGCACCCGCTCCCACCAGCGATGGGACATCCATAGACCAAGGGATAGC
GTATGTGTTAATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCCAACAGCTTCTAAAACATTGTATCAAGCATTTGTAGAACATCTCTTTGAT
CAAAGGGGAAGGGAATTTAGTTAGAAATGCAAATGGGTTTTTGAGGGAATTAGATTCTTCTTTTTGCATATTGTAGTTCATTTGTTGAACCTCTTTTGATGAAAGGAGAA
AGGAATTTAGTTAGAAATGCAAATGGGTTTTGAGGGATTTTATTTTATTTTATTTTTTGGGCATTATTGTTGTAGTAGTTCCATTGGGTGTTTCTGTTTTAGTCTTATTT
ATGATGATATGAGTCTGTTGGTGTGATCTTGTATTGCTATGTACAGTGTCCTGATTTGGAATGAGATTTATTGGTTTATCCCTATTTTTCTTTATTCTTAGCTTTG
Protein sequenceShow/hide protein sequence
MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF