; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G14730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G14730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationClcChr07:29279397..29285018
RNA-Seq ExpressionClc07G14730
SyntenyClc07G14730
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0034198 - cellular response to amino acid starvation (biological process)
GO:1904263 - positive regulation of TORC1 signaling (biological process)
GO:0031080 - nuclear pore outer ring (cellular component)
GO:0035859 - Seh1-associated complex (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR037363 - Sec13/Seh1 family
IPR037597 - Nucleoporin Seh1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149752.1 protein SEH1 [Cucumis sativus]9.3e-16679.31Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        MEKAMATF KGT+CSAWNYS+ RLAT S+DGTLVIFDSP PSSSSTS T TSNFKAHE AI KIVWVPPEYGDSVACI SDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCK FKSNSSQIL++QFGNSSSGLKMIAAFSDG+IKVYEL DPL+LK+WQLQAEFQNVIDSISTVRK+SCSSASISWNPHRGEQQSSFV+AFSSNTPQLN
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVA
        SAKVWEFDQAH RWLPVAELALTA+KGDEVYAVAWAQNIGR                                                   PYEVIAVA
Subjt:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVA

Query:  TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
        TQ+GIAIW LGLSPD DGRLS ERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_008451932.1 PREDICTED: protein SEH1 [Cucumis melo]4.3e-17181.43Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWN+S++RLAT S+DGTLVIFDSP PSSSSTSLTRTSNFKAHE AI KIVWVPPEYGDSVACI SDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCK FKSNSSQIL++QFGNSSSGLKMIAAFSDG+IKVYEL DPLDLKSWQLQAEFQNVIDSISTVRK+SCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVA
        SAKVWEFDQAHQRWLPVAELALTA+KGDEVYAVAWAQNIGR                                                   PYEVIAVA
Subjt:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVA

Query:  TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
        TQ+GIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022136602.1 protein SEH1 [Momordica charantia]7.8e-16579.37Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        ME AMA+FDKGT+CSAWNYSA+RLAT S DGTLVIFDSPDPSSSSTSLTRTSNFKAHE AI+KIVWVPPEYGDSVACI SDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        LCKRFKSNS+Q+L+IQFGNSSSGLKMIAAFS  H+KVYEL DPLDLK+WQLQAEFQNVIDSISTVRKASC SASISWNPHRGE QQSSFVLA +SNTPQL
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV
        NSAKVWEFDQAHQRWLPVAELAL ADKGDEVYAVAWAQNIGR                                                   PYEVIAV
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV

Query:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
        ATQKGIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022942103.1 protein SEH1 [Cucurbita moschata]2.3e-16479.1Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSA+RL TGSADGT+VIFDS DPSSSSTSLTRTSNFKAHE AI KIVWVPPEYGDS+ACI SDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        L K FKSNSSQI++IQFGNSSSGLKMIAAFSDG++KVYEL DPLDLKSWQLQAEFQNVIDSISTVRKA+C SASISWNP+RGE QQSSFVLAF S+TPQL
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNIGR                                                   PYEVIAV
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV

Query:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
        ATQKGIAIWRLGL+PD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_038897768.1 protein SEH1 [Benincasa hispida]4.6e-17382.76Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGT+CSAWNYSANRLATGSADGTL+IFDSPDPSSSSTSLTRTSNFK HE AIIKIVWVPPEYGDSVACI SDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCK FK NSSQIL+IQFGNSSSGLKMIAAFSDGHIKVYEL DPLDLKSWQLQAEFQNVIDSISTVRKA CSSASISWNPHRGEQQ SFVLAFSSNTPQLN
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVA
        SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGR                                                   PYEVIAVA
Subjt:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVA

Query:  TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
        TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHA FEPTS
Subjt:  TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ8 WD_REPEATS_REGION domain-containing protein4.5e-16679.31Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        MEKAMATF KGT+CSAWNYS+ RLAT S+DGTLVIFDSP PSSSSTS T TSNFKAHE AI KIVWVPPEYGDSVACI SDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCK FKSNSSQIL++QFGNSSSGLKMIAAFSDG+IKVYEL DPL+LK+WQLQAEFQNVIDSISTVRK+SCSSASISWNPHRGEQQSSFV+AFSSNTPQLN
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVA
        SAKVWEFDQAH RWLPVAELALTA+KGDEVYAVAWAQNIGR                                                   PYEVIAVA
Subjt:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVA

Query:  TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
        TQ+GIAIW LGLSPD DGRLS ERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A1S3BTS7 protein SEH12.1e-17181.43Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWN+S++RLAT S+DGTLVIFDSP PSSSSTSLTRTSNFKAHE AI KIVWVPPEYGDSVACI SDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCK FKSNSSQIL++QFGNSSSGLKMIAAFSDG+IKVYEL DPLDLKSWQLQAEFQNVIDSISTVRK+SCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVA
        SAKVWEFDQAHQRWLPVAELALTA+KGDEVYAVAWAQNIGR                                                   PYEVIAVA
Subjt:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVA

Query:  TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
        TQ+GIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  TQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1C5X6 protein SEH13.8e-16579.37Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        ME AMA+FDKGT+CSAWNYSA+RLAT S DGTLVIFDSPDPSSSSTSLTRTSNFKAHE AI+KIVWVPPEYGDSVACI SDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        LCKRFKSNS+Q+L+IQFGNSSSGLKMIAAFS  H+KVYEL DPLDLK+WQLQAEFQNVIDSISTVRKASC SASISWNPHRGE QQSSFVLA +SNTPQL
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV
        NSAKVWEFDQAHQRWLPVAELAL ADKGDEVYAVAWAQNIGR                                                   PYEVIAV
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV

Query:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
        ATQKGIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1FTY0 protein SEH11.1e-16479.1Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSA+RL TGSADGT+VIFDS DPSSSSTSLTRTSNFKAHE AI KIVWVPPEYGDS+ACI SDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        L K FKSNSSQI++IQFGNSSSGLKMIAAFSDG++KVYEL DPLDLKSWQLQAEFQNVIDSISTVRKA+C SASISWNP+RGE QQSSFVLAF S+TPQL
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNIGR                                                   PYEVIAV
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV

Query:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
        ATQKGIAIWRLGL+PD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1J2X1 protein SEH19.4e-16478.57Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSA+RL TGSADGT+V+FDS DPSSSSTSLTRTSNFKAHE AI KIVWVPPEYGDS+ACI SDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        L K FKSNSSQIL+IQFGNSSSGLKMIAAFSDG++KVYEL DPLDLKSWQLQAEFQNVIDSISTVRKA+C SASISWNP+RGE QQSSFVLAF S+TPQL
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV
        +SAKVWEFD+AHQRWLPVAELAL ADKGD VYAVAWAQNIGR                                                   PYEVIAV
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV

Query:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
        ATQKGIAIWRLGL+PD+DGRLSTERVALLSGHN EVW+MEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

SwissProt top hitse value%identityAlignment
A7YY75 Nucleoporin SEH12.7e-2725.42Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS
        ++++   R+AT S+D ++ ++D     S S     T+++K H G++ ++ W  PE+G  +A    D T+++WEE+V ++         W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS

Query:  QILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFD-Q
         + +++F     GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      +  +   S ++     AKV  F+  
Subjt:  QILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFD-Q

Query:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVATQKGIAIWR
         + R    AE  LT    D V+ +A+A N+GR      IA   + +  + PV  E    S  P  F                                  
Subjt:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVATQKGIAIWR

Query:  LGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVW
                       VA    HN +VW + W++ G  LAS+G DG VRLW++N    W
Subjt:  LGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVW

C1BK83 Nucleoporin SEH13.2e-2824.45Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQ-----WKLCKRFKSNSS
        ++++   R+AT S+D ++ ++D  D    +     T+++K H G++ ++ W  PE+G  +A    D T+++WEE+V ++   Q     W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQ-----WKLCKRFKSNSS

Query:  QILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFS--SNTPQLNSAKVWEFD
         + +++F     GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      S  +   S  SNT      +++E+ 
Subjt:  QILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFS--SNTPQLNSAKVWEFD

Query:  QAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVATQKGIAIW
        +  +++  V  L       D V+ +A+A N+GR                                                    + V+A+AT K + I+
Subjt:  QAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVATQKGIAIW

Query:  RL-----GLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVW
        +L       S     +L  +  A   GHN +VW + W++    LAS+G DG VRLW++N    W
Subjt:  RL-----GLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVW

Q5RAN6 Nucleoporin SEH12.7e-2725.42Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS
        ++++   R+AT S+D ++ ++D     S S     T+++K H G++ ++ W  PE+G  +A    D T+++WEE+V ++         W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS

Query:  QILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFD-Q
         + +++F     GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      S  +   S ++     AKV  F+  
Subjt:  QILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFD-Q

Query:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVATQKGIAIWR
         + R    AE  +T    D V+ +A+A N+GR      IA   + +  + PV  E    S  P  F                                  
Subjt:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVATQKGIAIWR

Query:  LGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVW
                       VA    HN +VW + W++ G  LAS+G DG VRLW++N    W
Subjt:  LGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVW

Q93VR9 Protein SEH12.8e-11754.79Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        M K+MAT D GT CS+WN S +RLA GS +G L I++S   +SSS++ + TS  +  E +I+KIVW+P EYGD+VAC+  DG+ S+WEE+ EDA  L+WK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQS-SFVLAFSSNTPQL
        LCK  K+ SSQ+L++QFG S   LKM+AA+SDG+++V+EL +PL+LK+WQLQAEFQNVIDS+ST+ K S  SAS+SWNP +GE+Q  SFVLAF+S++P L
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQS-SFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV
        NS+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NIGR                                                   PYEV+AV
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV

Query:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEP
        AT KGI IW +GL+PD +GRL  ++V+ LSGH GEVW+MEWDM GMTLASTG DGMV+LWQSNLNG WH+ A  EP
Subjt:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEP

Q96EE3 Nucleoporin SEH12.1e-2725.42Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS
        ++++   R+AT S+D ++ ++D     S S     T+++K H G++ ++ W  PE+G  +A    D T+++WEE+V ++         W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS

Query:  QILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFD-Q
         + +++F     GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      S  +   S ++     AKV  F+  
Subjt:  QILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFD-Q

Query:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVATQKGIAIWR
         + R    AE  +T    D V+ +A+A N+GR      IA   + +  + PV  E    S  P  F                                  
Subjt:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVATQKGIAIWR

Query:  LGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVW
                       VA    HN +VW + W++ G  LAS+G DG VRLW++N    W
Subjt:  LGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVW

Arabidopsis top hitse value%identityAlignment
AT1G64350.1 Transducin/WD40 repeat-like superfamily protein2.0e-11854.79Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK
        M K+MAT D GT CS+WN S +RLA GS +G L I++S   +SSS++ + TS  +  E +I+KIVW+P EYGD+VAC+  DG+ S+WEE+ EDA  L+WK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQS-SFVLAFSSNTPQL
        LCK  K+ SSQ+L++QFG S   LKM+AA+SDG+++V+EL +PL+LK+WQLQAEFQNVIDS+ST+ K S  SAS+SWNP +GE+Q  SFVLAF+S++P L
Subjt:  LCKRFKSNSSQILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQS-SFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV
        NS+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NIGR                                                   PYEV+AV
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAV

Query:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEP
        AT KGI IW +GL+PD +GRL  ++V+ LSGH GEVW+MEWDM GMTLASTG DGMV+LWQSNLNG WH+ A  EP
Subjt:  ATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCTATGGCGACCTTCGACAAAGGCACCGTCTGTTCAGCTTGGAACTACTCCGCCAACAGATTAGCCACCGGTTCTGCCGACGGAACCCTCGTCATCTTCGA
TTCTCCCGACCCTTCTTCCTCCTCCACCTCCTTAACTCGCACCTCAAACTTCAAGGCACATGAGGGTGCAATTATTAAGATTGTTTGGGTCCCTCCGGAGTATGGTGATT
CTGTTGCATGCATTTTTTCAGATGGAACTTCATCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTACAGTGGAAGCTATGCAAACGCTTCAAAAGTAATTCATCT
CAAATCCTAGAGATTCAATTTGGAAATTCCTCCTCTGGTCTAAAAATGATTGCTGCATTTTCAGATGGTCATATAAAAGTTTATGAGCTTACGGATCCTTTGGATTTGAA
GAGTTGGCAACTTCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACAGTCAGGAAAGCTTCTTGTTCATCTGCAAGTATATCTTGGAATCCACATCGAGGGGAAC
AACAATCAAGCTTTGTTTTGGCTTTTAGTTCGAATACACCACAGCTTAATTCCGCCAAGGTTTGGGAATTTGATCAGGCTCACCAAAGATGGCTTCCTGTAGCAGAGTTG
GCTTTGACTGCAGACAAAGGTGACGAGGTTTATGCTGTTGCGTGGGCGCAAAATATTGGAAGGAAAAATGGGCAGAATAGAATAGCCGAATCTACAATTTCTTTATCATA
TATAGGTCCTGTTGGACCTGAGTTCAGATGTAGGTCTCAACATCCCAAGTCCTTTAATTTCTTTACATGTCACAAACTTTCTGGGGCAATTCCTGACAACTGTTTGCCAT
ATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGGCGCCTTGGATTAAGCCCGGACACAGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGG
CATAATGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTGGTATGACATTAGCATCAACAGGAAAGGATGGGATGGTACGGTTATGGCAATCCAACCTTAATGGTGTTTG
GCACCAACATGCTGCATTTGAGCCCACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
GGCAGAGGAGGGAAGCGAGATTTCGTAGCCGGCGAAGGCGCGAACAAGAAATTGAGAGCTCAGATGGAGAAGGCTATGGCGACCTTCGACAAAGGCACCGTCTGTTCAGC
TTGGAACTACTCCGCCAACAGATTAGCCACCGGTTCTGCCGACGGAACCCTCGTCATCTTCGATTCTCCCGACCCTTCTTCCTCCTCCACCTCCTTAACTCGCACCTCAA
ACTTCAAGGCACATGAGGGTGCAATTATTAAGATTGTTTGGGTCCCTCCGGAGTATGGTGATTCTGTTGCATGCATTTTTTCAGATGGAACTTCATCATTGTGGGAGGAG
GTTGTTGAAGATGCCCAGCCTCTACAGTGGAAGCTATGCAAACGCTTCAAAAGTAATTCATCTCAAATCCTAGAGATTCAATTTGGAAATTCCTCCTCTGGTCTAAAAAT
GATTGCTGCATTTTCAGATGGTCATATAAAAGTTTATGAGCTTACGGATCCTTTGGATTTGAAGAGTTGGCAACTTCAGGCTGAATTTCAGAATGTTATTGATTCCATTT
CTACAGTCAGGAAAGCTTCTTGTTCATCTGCAAGTATATCTTGGAATCCACATCGAGGGGAACAACAATCAAGCTTTGTTTTGGCTTTTAGTTCGAATACACCACAGCTT
AATTCCGCCAAGGTTTGGGAATTTGATCAGGCTCACCAAAGATGGCTTCCTGTAGCAGAGTTGGCTTTGACTGCAGACAAAGGTGACGAGGTTTATGCTGTTGCGTGGGC
GCAAAATATTGGAAGGAAAAATGGGCAGAATAGAATAGCCGAATCTACAATTTCTTTATCATATATAGGTCCTGTTGGACCTGAGTTCAGATGTAGGTCTCAACATCCCA
AGTCCTTTAATTTCTTTACATGTCACAAACTTTCTGGGGCAATTCCTGACAACTGTTTGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGGCGC
CTTGGATTAAGCCCGGACACAGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAATGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTGGTATGAC
ATTAGCATCAACAGGAAAGGATGGGATGGTACGGTTATGGCAATCCAACCTTAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAAACTTGAGAACGTT
TTGTTTCTTTATGATGTAACCACTTCCTGTATTCAATATAAGGAAGAACTTCGAAATAATATTATTTGTCTTGCTGAGTGGGATACCTTATTGGAGACCCTTCGAGAAAA
TCAATTGTCATTGATGCATTTATTTCTCCAAATTGCTTTTACCGAGTTGATGTTGCTCAAGAAGTATGAAGTTCACGCAGACAAGAAGAAAGAATAAAACT
Protein sequenceShow/hide protein sequence
MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEGAIIKIVWVPPEYGDSVACIFSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSS
QILEIQFGNSSSGLKMIAAFSDGHIKVYELTDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFDQAHQRWLPVAEL
ALTADKGDEVYAVAWAQNIGRKNGQNRIAESTISLSYIGPVGPEFRCRSQHPKSFNFFTCHKLSGAIPDNCLPYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSG
HNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS