; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G14890 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G14890
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationClcChr07:29445792..29446912
RNA-Seq ExpressionClc07G14890
SyntenyClc07G14890
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044536.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]9.8e-11688.02Show/hide
Query:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ
        MKSTLMG LQLHFPQLGLRQNLTN SLHCCTAAPPPNIICGLRKGL+KPLGRSRVPS E+IQAVQSLKLAK TSKMEDVINTKLSRLLKADLFDALTELQ
Subjt:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI
        RQNELELSLQVFKFMQ EEWYEPD+RLYHGMIMMMGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERA +TY LM ASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI

Query:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTG
        LIKNLEKF+EEFA+VVKK+C+EYLD+P+KF ND  QKL T G
Subjt:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTG

XP_008454079.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62350-like [Cucumis melo]4.8e-11587.6Show/hide
Query:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ
        MKSTLMG LQLHFP+LGLRQNLTN SLHCCTAAPPPNIICGLRKGL+KPLGRSRVPS E+IQAVQSLKLAK TSKMEDVINTKLSRLLKADLFDALTELQ
Subjt:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI
        RQNELELSLQVFKFMQ EEWYEPD+RLYHGMIMMMGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERA +TY LM ASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI

Query:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTG
        LIKNLEKF+EEFA+VVKK+C EYLD+P+KF ND  QKL T G
Subjt:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTG

XP_022980054.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima]7.7e-11388.28Show/hide
Query:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ
        MKSTLMG LQLH PQLG RQNLTN +LHCCTA PPPNIICGLRKG RKPLG+SRVPSTESIQAVQSLKLAKS SKMEDVIN+KLSRLLKADLFDAL ELQ
Subjt:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI
        RQNELELSLQVFKFM+ EEWYEPD+ LYH MI MMGKNKMIEMAE+VFH+ K+DGLE DTRAFNEMMGAYLQVDMVERAVETYELMKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI

Query:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLM
        LIKNLE+FREEFA VVKKEC E+LDSPEKFL DVEQKLM
Subjt:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLM

XP_023527118.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp. pepo]1.1e-11489.54Show/hide
Query:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ
        MKSTLMG LQLHFPQLG RQNLTN +LHCCTA PPPNIICGLRKG RKPLG+SRVPSTESIQAVQSLKLAKS SKMEDVIN+KLSRLLKADLFDAL ELQ
Subjt:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI
        RQNELELSLQVFKFM+ EEWYEPD+ LYH MI MMGKNKMIEMAE+VFHELK+DGLE DTRAFNEMMGAY+QVDMVERAVETYELMKASGCIPDKLTFKI
Subjt:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI

Query:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLM
        LIKNLE+FREEFA VVKKEC E+LDSPEKFL DVEQKLM
Subjt:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLM

XP_038878176.1 pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida]9.4e-11990.2Show/hide
Query:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ
        MKSTLMG LQ HFPQLGLRQ+LTN SLHCCTAAPPPNIICGLRKGLRKPLGRSRVPS E+IQAVQSLKLAKSTSKMEDVIN+KLSRLLKADLFDALTELQ
Subjt:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI
        RQNELELSLQVFKF+Q EEWYEPD+RLYHGMI+M GKNKMIEMAE++FH+LKKDGLE D RAFNEMMGAYLQVDMVERAVETYELMKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI

Query:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTGRIL
        LIKNLEKFREEFA VVKKECN YLDSPEKFLNDVEQK    GRIL
Subjt:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTGRIL

TrEMBL top hitse value%identityAlignment
A0A0A0KU23 Uncharacterized protein1.3e-11085.31Show/hide
Query:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ
        MKSTL+G LQLHF QLGLRQNLTN SL C TAAPPPNIICGLRKG  +PLG SRVPS E+IQAVQSLKLAKSTSKMEDVINTKL RLLKADLFDAL+ELQ
Subjt:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI
        RQNELELSLQVFKFMQ EEW+EPD+RLYHGMIM+MGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERAVETY LM ASGC PD+LTFKI
Subjt:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI

Query:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTGRIL
        LIKNLEKFREEFAVVVKK+CNEYLD+P+KF ND  QKL T  RIL
Subjt:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTGRIL

A0A1S3BX97 pentatricopeptide repeat-containing protein At1g62350-like2.3e-11587.6Show/hide
Query:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ
        MKSTLMG LQLHFP+LGLRQNLTN SLHCCTAAPPPNIICGLRKGL+KPLGRSRVPS E+IQAVQSLKLAK TSKMEDVINTKLSRLLKADLFDALTELQ
Subjt:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI
        RQNELELSLQVFKFMQ EEWYEPD+RLYHGMIMMMGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERA +TY LM ASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI

Query:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTG
        LIKNLEKF+EEFA+VVKK+C EYLD+P+KF ND  QKL T G
Subjt:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTG

A0A5A7TQZ8 Pentatricopeptide repeat-containing protein4.7e-11688.02Show/hide
Query:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ
        MKSTLMG LQLHFPQLGLRQNLTN SLHCCTAAPPPNIICGLRKGL+KPLGRSRVPS E+IQAVQSLKLAK TSKMEDVINTKLSRLLKADLFDALTELQ
Subjt:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI
        RQNELELSLQVFKFMQ EEWYEPD+RLYHGMIMMMGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERA +TY LM ASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI

Query:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTG
        LIKNLEKF+EEFA+VVKK+C+EYLD+P+KF ND  QKL T G
Subjt:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTG

A0A5D3CZ95 Pentatricopeptide repeat-containing protein2.3e-11587.6Show/hide
Query:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ
        MKSTLMG LQLHFP+LGLRQNLTN SLHCCTAAPPPNIICGLRKGL+KPLGRSRVPS E+IQAVQSLKLAK TSKMEDVINTKLSRLLKADLFDALTELQ
Subjt:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI
        RQNELELSLQVFKFMQ EEWYEPD+RLYHGMIMMMGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERA +TY LM ASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI

Query:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTG
        LIKNLEKF+EEFA+VVKK+C EYLD+P+KF ND  QKL T G
Subjt:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTG

A0A6J1IY98 pentatricopeptide repeat-containing protein At1g62350-like3.7e-11388.28Show/hide
Query:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ
        MKSTLMG LQLH PQLG RQNLTN +LHCCTA PPPNIICGLRKG RKPLG+SRVPSTESIQAVQSLKLAKS SKMEDVIN+KLSRLLKADLFDAL ELQ
Subjt:  MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI
        RQNELELSLQVFKFM+ EEWYEPD+ LYH MI MMGKNKMIEMAE+VFH+ K+DGLE DTRAFNEMMGAYLQVDMVERAVETYELMKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKI

Query:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLM
        LIKNLE+FREEFA VVKKEC E+LDSPEKFL DVEQKLM
Subjt:  LIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLM

SwissProt top hitse value%identityAlignment
A7LN87 Pentatricopeptide repeat-containing protein PPR5, chloroplastic3.7e-0926.37Show/hide
Query:  STESIQAVQSL--KLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKD
        + E+ + V+SL  + A    ++  V++  +  +     F    EL R++     L VF++MQK+ WY  D  +Y  +I +MG+   I MA  +F +++  
Subjt:  STESIQAVQSL--KLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKD

Query:  GLEADTRAFNEMMGAYL----QVDMVERAVETYELMKA-SGCIPDKLTFKILIKNLEKFREEFAV-VVKKECNEYLDSPEKF
        G + DT  +N ++GA+L    +   + +A+  +E MK    C P  +T+ IL++   +  +   V ++ K+ +E + SP+ +
Subjt:  GLEADTRAFNEMMGAYL----QVDMVERAVETYELMKA-SGCIPDKLTFKILIKNLEKFREEFAV-VVKKECNEYLDSPEKF

Q1PFH7 Pentatricopeptide repeat-containing protein At1g623502.6e-1829.69Show/hide
Query:  STESIQAVQSLKLAKSTS-KMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDG
        S E + A + LK  ++ S +++  I + +SRLLK+DL   L E QRQN++ L +++++ +++E WY PD+  Y  M+MM+ +NK ++  +KV+ +LKK+ 
Subjt:  STESIQAVQSLKLAKSTS-KMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDG

Query:  LEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNL-------EKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT
        +  D   F +++  +L  ++   A+  Y  M+ S   P  L F++++K L       EK +++F  +         D PE    D +++  T
Subjt:  LEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNL-------EKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic9.8e-1027.45Show/hide
Query:  SRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELK
        +++ S ++I  +   +  KS  + +      L R +   L + +T L+     E ++QVF+ ++++ WY+P++ +Y  +I+M+GK K  E A ++F E+ 
Subjt:  SRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELK

Query:  KDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKAS-GCIPDKLTFKILIKN
         +G   +   +  ++ AY +    + A    E MK+S  C PD  T+ ILIK+
Subjt:  KDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKAS-GCIPDKLTFKILIKN

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic6.8e-1132.9Show/hide
Query:  NIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEP-DIRLYHGMIMMM
        +I CG R   R PL + R+ STE+IQ++QSLK A  T     +    L RL+K+DL   L EL RQ+   L++ V   ++ E  Y P D+ LY  ++  +
Subjt:  NIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEP-DIRLYHGMIMMM

Query:  GKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASG
         +NK  +  +++  E+      +D +A  +++ A +  +  E  V  Y LM+ SG
Subjt:  GKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASG

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic9.8e-1832.3Show/hide
Query:  RKPLGR-SRVPSTESIQAVQSLK-LAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMA
        R PL R  ++   E++  +  LK L +   K++  I T + RLLK D+   + EL+RQ E  L++++F+ +QK+EWY+PD+ +Y  +I+ + K+K ++ A
Subjt:  RKPLGR-SRVPSTESIQAVQSLK-LAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMA

Query:  EKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNL
          ++ ++KK+ L  D++ + E++  +L+      A+  YE M  S   P++L F++L+K L
Subjt:  EKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNL

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein1.8e-1929.69Show/hide
Query:  STESIQAVQSLKLAKSTS-KMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDG
        S E + A + LK  ++ S +++  I + +SRLLK+DL   L E QRQN++ L +++++ +++E WY PD+  Y  M+MM+ +NK ++  +KV+ +LKK+ 
Subjt:  STESIQAVQSLKLAKSTS-KMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDG

Query:  LEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNL-------EKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT
        +  D   F +++  +L  ++   A+  Y  M+ S   P  L F++++K L       EK +++F  +         D PE    D +++  T
Subjt:  LEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNL-------EKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT

AT3G27750.1 FUNCTIONS IN: molecular_function unknown4.8e-1232.9Show/hide
Query:  NIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEP-DIRLYHGMIMMM
        +I CG R   R PL + R+ STE+IQ++QSLK A  T     +    L RL+K+DL   L EL RQ+   L++ V   ++ E  Y P D+ LY  ++  +
Subjt:  NIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEP-DIRLYHGMIMMM

Query:  GKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASG
         +NK  +  +++  E+      +D +A  +++ A +  +  E  V  Y LM+ SG
Subjt:  GKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASG

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein6.9e-1932.3Show/hide
Query:  RKPLGR-SRVPSTESIQAVQSLK-LAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMA
        R PL R  ++   E++  +  LK L +   K++  I T + RLLK D+   + EL+RQ E  L++++F+ +QK+EWY+PD+ +Y  +I+ + K+K ++ A
Subjt:  RKPLGR-SRVPSTESIQAVQSLK-LAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMA

Query:  EKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNL
          ++ ++KK+ L  D++ + E++  +L+      A+  YE M  S   P++L F++L+K L
Subjt:  EKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNL

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain1.1e-2433.65Show/hide
Query:  RKPLGRSRVPSTESIQAVQSLKLA----------------KSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHG
        RKPL R R+ S E+IQAVQ+LK A                 S++ ++ VI +K  RLLK D+   L EL RQNE  L+L+VF+ ++KE WY+P +R+Y  
Subjt:  RKPLGRSRVPSTESIQAVQSLKLA----------------KSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHG

Query:  MIMMMGKNKMIEMAEKVFHELKKD-GLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNLEKFRE-EFAVVVKKECNEYLDSPE
        MI +M  N ++E    ++  +K + GL A+   FN ++   L   + +  ++ Y  M++ G  PD+ +F++L+  LE   E   + +V+++ +EY     
Subjt:  MIMMMGKNKMIEMAEKVFHELKKD-GLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNLEKFRE-EFAVVVKKECNEYLDSPE

Query:  KFLNDVEQ
        +F+ + E+
Subjt:  KFLNDVEQ

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein6.9e-1127.45Show/hide
Query:  SRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELK
        +++ S ++I  +   +  KS  + +      L R +   L + +T L+     E ++QVF+ ++++ WY+P++ +Y  +I+M+GK K  E A ++F E+ 
Subjt:  SRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELK

Query:  KDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKAS-GCIPDKLTFKILIKN
         +G   +   +  ++ AY +    + A    E MK+S  C PD  T+ ILIK+
Subjt:  KDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKAS-GCIPDKLTFKILIKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTACTCTAATGGGTGGTCTTCAACTCCATTTTCCTCAATTGGGTCTTCGCCAAAACCTCACGAACTCAAGCCTCCATTGTTGTACGGCAGCTCCACCTCCAAA
TATCATCTGTGGCCTCAGAAAGGGCTTGAGGAAGCCCTTAGGGAGGTCAAGGGTGCCCTCCACTGAGTCTATTCAAGCAGTTCAGTCCCTCAAGCTTGCTAAATCCACCT
CCAAAATGGAAGACGTTATCAATACCAAGCTCAGCCGATTGCTGAAAGCAGACTTGTTTGATGCTCTGACTGAATTACAGAGGCAAAATGAGCTGGAATTATCGCTTCAG
GTCTTCAAATTTATGCAAAAAGAAGAATGGTACGAGCCAGATATAAGGTTATACCATGGGATGATTATGATGATGGGAAAGAACAAAATGATTGAAATGGCTGAAAAGGT
CTTCCATGAGTTAAAAAAGGATGGGTTAGAAGCAGACACAAGAGCGTTCAATGAGATGATGGGAGCATATTTGCAAGTGGACATGGTCGAAAGAGCAGTTGAGACATATG
AATTAATGAAAGCATCAGGTTGTATTCCAGATAAACTGACTTTCAAGATCTTGATCAAGAATCTCGAGAAATTTAGAGAAGAATTTGCTGTAGTGGTGAAGAAAGAATGT
AATGAGTACTTGGATTCCCCTGAGAAATTCCTCAACGATGTCGAACAGAAACTGATGACGACAGGTCGAATTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTACTCTAATGGGTGGTCTTCAACTCCATTTTCCTCAATTGGGTCTTCGCCAAAACCTCACGAACTCAAGCCTCCATTGTTGTACGGCAGCTCCACCTCCAAA
TATCATCTGTGGCCTCAGAAAGGGCTTGAGGAAGCCCTTAGGGAGGTCAAGGGTGCCCTCCACTGAGTCTATTCAAGCAGTTCAGTCCCTCAAGCTTGCTAAATCCACCT
CCAAAATGGAAGACGTTATCAATACCAAGCTCAGCCGATTGCTGAAAGCAGACTTGTTTGATGCTCTGACTGAATTACAGAGGCAAAATGAGCTGGAATTATCGCTTCAG
GTCTTCAAATTTATGCAAAAAGAAGAATGGTACGAGCCAGATATAAGGTTATACCATGGGATGATTATGATGATGGGAAAGAACAAAATGATTGAAATGGCTGAAAAGGT
CTTCCATGAGTTAAAAAAGGATGGGTTAGAAGCAGACACAAGAGCGTTCAATGAGATGATGGGAGCATATTTGCAAGTGGACATGGTCGAAAGAGCAGTTGAGACATATG
AATTAATGAAAGCATCAGGTTGTATTCCAGATAAACTGACTTTCAAGATCTTGATCAAGAATCTCGAGAAATTTAGAGAAGAATTTGCTGTAGTGGTGAAGAAAGAATGT
AATGAGTACTTGGATTCCCCTGAGAAATTCCTCAACGATGTCGAACAGAAACTGATGACGACAGGTCGAATTCTTTAA
Protein sequenceShow/hide protein sequence
MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQ
VFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKEC
NEYLDSPEKFLNDVEQKLMTTGRIL