; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G15060 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G15060
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description54S ribosomal protein L51, mitochondrial-like
Genome locationClcChr07:29618702..29622638
RNA-Seq ExpressionClc07G15060
SyntenyClc07G15060
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR036249 - Thioredoxin-like superfamily
IPR039927 - 39S ribosomal protein L43/54S ribosomal protein L51


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152128.1 54S ribosomal protein L51, mitochondrial [Cucumis sativus]2.5e-6093.28Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLKGF++SNN+RVVCVKN+DPEEIH CAMRLRN+LGRKVVKLRT
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTKNPSVQGTWNTDVRF
Subjt:  RHVTKNPSVQGTWNTDVRF

XP_008454040.1 PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo]6.1e-5992.44Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTEL RGQHP+LKGFYKSNN+RVVCVKN+DPEEIH CA RLRN+LGRKVVKLRT
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTKNPSVQGTWNTDVRF
Subjt:  RHVTKNPSVQGTWNTDVRF

XP_022158383.1 54S ribosomal protein L51, mitochondrial [Momordica charantia]1.4e-5892.44Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQL+KL+VSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLK FYK+NN RVVCVKNLDPEEI+L A+RLRNALGRKV+KLRT
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTKNPSVQGTWNTDVRF
Subjt:  RHVTKNPSVQGTWNTDVRF

XP_022979453.1 54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima]4.7e-5989.92Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQLKKL+VSYCDWGGSSRGIRAFMDS+LPAF+EKNPQL++VTELIRGQHPHLKGFYKSNNHRV+CVKN+DPE+IHL A RLRNALGRKV+KLRT
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTKNPS QGTWNTDVRF
Subjt:  RHVTKNPSVQGTWNTDVRF

XP_038877046.1 54S ribosomal protein L51, mitochondrial [Benincasa hispida]7.0e-6398.32Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNN+RVVCVKN+DPEEIHLCAMRLRNALGRKVVKLRT
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTKNPSVQGTWNTDVRF
Subjt:  RHVTKNPSVQGTWNTDVRF

TrEMBL top hitse value%identityAlignment
A0A0A0KU37 L51_S25_CI-B8 domain-containing protein1.2e-6093.28Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLKGF++SNN+RVVCVKN+DPEEIH CAMRLRN+LGRKVVKLRT
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTKNPSVQGTWNTDVRF
Subjt:  RHVTKNPSVQGTWNTDVRF

A0A1S3BXU0 54S ribosomal protein L51, mitochondrial3.0e-5992.44Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTEL RGQHP+LKGFYKSNN+RVVCVKN+DPEEIH CA RLRN+LGRKVVKLRT
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTKNPSVQGTWNTDVRF
Subjt:  RHVTKNPSVQGTWNTDVRF

A0A6J1DVX7 54S ribosomal protein L51, mitochondrial6.6e-5992.44Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQL+KL+VSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLK FYK+NN RVVCVKNLDPEEI+L A+RLRNALGRKV+KLRT
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTKNPSVQGTWNTDVRF
Subjt:  RHVTKNPSVQGTWNTDVRF

A0A6J1EWV2 54S ribosomal protein L51, mitochondrial7.6e-5586.55Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQL+KL+VSYCDWGGSSRGIRAFMDSQLP FK+KNPQL+VV ELIRGQHPHLK FYK+NN RVVCV+NLD EEIHL A RLRNALGRKV+KL+T
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTKNPSVQGTW TDVRF
Subjt:  RHVTKNPSVQGTWNTDVRF

A0A6J1IW90 54S ribosomal protein L51, mitochondrial-like2.3e-5989.92Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQLKKL+VSYCDWGGSSRGIRAFMDS+LPAF+EKNPQL++VTELIRGQHPHLKGFYKSNNHRV+CVKN+DPE+IHL A RLRNALGRKV+KLRT
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTKNPS QGTWNTDVRF
Subjt:  RHVTKNPSVQGTWNTDVRF

SwissProt top hitse value%identityAlignment
Q06090 54S ribosomal protein L51, mitochondrial6.0e-0930.43Show/hide
Query:  VWQLKKLVVSYCDWGGSSRGIRAFMDS-QLPAFKEKNP--QLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRH
        V+  +K+ + +C+WGGSS G+R F+ S +L  + ++ P  Q EV+    +  HP L+  Y +   +V+CV+NL+ + +      L+++ G  +++ RT++
Subjt:  VWQLKKLVVSYCDWGGSSRGIRAFMDS-QLPAFKEKNP--QLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRH

Query:  ---VTKNPSVQGTWN
            + N SV+G W+
Subjt:  ---VTKNPSVQGTWN

Q758S3 54S ribosomal protein L51, mitochondrial3.4e-1233.33Show/hide
Query:  VWQLKKLVVSYCDWGGSSRGIRAFMDS-QLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVT
        ++  KK+ + YC+WGGSS+G+R F+ S +L  + EK PQ++    + +  HP LK  Y +  ++ +CV+NL+ + + L    LR + G ++     RH  
Subjt:  VWQLKKLVVSYCDWGGSSRGIRAFMDS-QLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVT

Query:  K-------NPSVQGTWN
        K       N SV+G W+
Subjt:  K-------NPSVQGTWN

Q8N983 39S ribosomal protein L43, mitochondrial9.7e-0729.73Show/hide
Query:  RGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHV
        R V QL++L  S    G SSRG R F++ ++  F  +NP + +         P +   Y +   R   +     EEI     +L +  G  V+++R    
Subjt:  RGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHV

Query:  TKNPSVQGTWN
        T NPS+QG W+
Subjt:  TKNPSVQGTWN

Q99N89 39S ribosomal protein L43, mitochondrial5.7e-0730.91Show/hide
Query:  RGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHV
        R V QL++L +S      SSRG R F++ ++  F  +NP + V         P +   Y +   R   V +   EEI     +L +  G  V+++R    
Subjt:  RGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHV

Query:  TKNPSVQGTW
        T NPS+QG W
Subjt:  TKNPSVQGTW

Q9UUC8 54S ribosomal protein L51, mitochondrial2.6e-1227.62Show/hide
Query:  KKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSV
        +++  SYC+WGGSS+G++ F+ ++L +  +++  +E      +G+HP ++ +Y +   +V+C + +    I   A+  R++ G K   ++    + NPSV
Subjt:  KKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSV

Query:  QGTWN
        +G W+
Subjt:  QGTWN

Arabidopsis top hitse value%identityAlignment
AT3G59650.1 mitochondrial ribosomal protein L51/S25/CI-B8 family protein9.8e-5581.51Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT
        MALRGVWQLKKLVVSYC+WGGSSRGIRAFM+S+LPA KEKNPQLEV+TEL RGQHP+LKG Y++ N RVVCVKN+DPEE+ L A RLRN+LGRKVVKLRT
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRT

Query:  RHVTKNPSVQGTWNTDVRF
        RHVTK+PSVQGTW T V+F
Subjt:  RHVTKNPSVQGTWNTDVRF

AT3G59650.2 mitochondrial ribosomal protein L51/S25/CI-B8 family protein4.2e-5066.44Show/hide
Query:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYK---------------------------SNNHRVVCVK
        MALRGVWQLKKLVVSYC+WGGSSRGIRAFM+S+LPA KEKNPQLEV+TEL RGQHP+LKG Y                            + N RVVCVK
Subjt:  MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYK---------------------------SNNHRVVCVK

Query:  NLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        N+DPEE+ L A RLRN+LGRKVVKLRTRHVTK+PSVQGTW T V+F
Subjt:  NLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAAGGAATTCAGCCACCCCCTCCGGCCTTCCTCCTATAACCATCCCCTCCACCCTGCACGCCGTCTCAGCCTTCCGGCGAAATCGCTGCCACAACTACCTCTT
GCAGTCGCTCGCCACTTCGAGCAAACGGAATCGCGCCGCCGCCGCTCATTTTTCGGATCCCAAGAATAAGATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGCTGGTTG
TTAGCTATTGTGATTGGGGAGGAAGCAGCAGGGGTATCAGGGCATTTATGGACTCACAATTGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTC
ATTCGTGGTCAGCATCCACACTTGAAGGGCTTCTACAAAAGCAATAATCATCGTGTGGTATGTGTGAAGAATTTGGATCCGGAAGAAATACATTTATGCGCGATGAGACT
AAGGAATGCACTGGGACGAAAGGTGGTAAAACTGAGGACAAGACATGTAACCAAAAATCCTAGTGTGCAAGGTACCTGGAACACTGATGTAAGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAAAGGAATTCAGCCACCCCCTCCGGCCTTCCTCCTATAACCATCCCCTCCACCCTGCACGCCGTCTCAGCCTTCCGGCGAAATCGCTGCCACAACTACCTCTT
GCAGTCGCTCGCCACTTCGAGCAAACGGAATCGCGCCGCCGCCGCTCATTTTTCGGATCCCAAGAATAAGATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGCTGGTTG
TTAGCTATTGTGATTGGGGAGGAAGCAGCAGGGGTATCAGGGCATTTATGGACTCACAATTGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTC
ATTCGTGGTCAGCATCCACACTTGAAGGGCTTCTACAAAAGCAATAATCATCGTGTGGTATGTGTGAAGAATTTGGATCCGGAAGAAATACATTTATGCGCGATGAGACT
AAGGAATGCACTGGGACGAAAGGTGGTAAAACTGAGGACAAGACATGTAACCAAAAATCCTAGTGTGCAAGGTACCTGGAACACTGATGTAAGATTTTGA
Protein sequenceShow/hide protein sequence
MKKRNSATPSGLPPITIPSTLHAVSAFRRNRCHNYLLQSLATSSKRNRAAAAHFSDPKNKMALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTEL
IRGQHPHLKGFYKSNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF