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Clc07G15345 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G15345
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionROTUNDIFOLIA like 10
Genome locationClcChr07:29931496..29931681
RNA-Seq ExpressionClc07G15345
SyntenyClc07G15345
Gene Ontology termsGO:0008285 - negative regulation of cell population proliferation (biological process)
InterPro domainsIPR012552 - DVL


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649101.1 hypothetical protein Csa_023809, partial [Cucumis sativus]6.0e-1487.5Show/hide
Query:  ERMMKSHSHR--LTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD
        ++MMKSHSHR  L+SKCAALIKQQRGRIYLLRRCAT+LLCSYIHGDHD
Subjt:  ERMMKSHSHR--LTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD

KAF5743827.1 hypothetical protein HS088_TW08G00415 [Tripterygium wilfordii]1.9e-0759.32Show/hide
Query:  MAELFQVHCKSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        MAEL    C +K  ++    S    L+SKCA L+KQQR RIY+LRRCATMLLC YIHGD
Subjt:  MAELFQVHCKSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

MBA0724339.1 hypothetical protein [Gossypium laxum]1.4e-0753.97Show/hide
Query:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YIHGD
Subjt:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

XP_017648585.1 PREDICTED: uncharacterized protein LOC108488810 [Gossypium arboreum]1.1e-0753.97Show/hide
Query:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YIHGD
Subjt:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

XP_034901554.1 uncharacterized protein LOC118039075 [Populus alba]8.3e-0860.34Show/hide
Query:  FQVHCKSKT---KNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        FQV+ KS T   K     +S  H  T+KCAAL+K+QR RIY+LRRCATMLLC YI GD
Subjt:  FQVHCKSKT---KNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

TrEMBL top hitse value%identityAlignment
A0A5D2EWW7 Uncharacterized protein5.3e-0853.97Show/hide
Query:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YIHGD
Subjt:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

A0A5D2NPT1 Uncharacterized protein5.3e-0853.97Show/hide
Query:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YIHGD
Subjt:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

A0A5D2XIA3 Uncharacterized protein5.3e-0853.97Show/hide
Query:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YIHGD
Subjt:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

A0A5J5TZV6 Uncharacterized protein5.3e-0853.97Show/hide
Query:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YIHGD
Subjt:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

A0A6P4QMQ4 uncharacterized protein LOC1084888105.3e-0853.97Show/hide
Query:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YIHGD
Subjt:  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

SwissProt top hitse value%identityAlignment
F4HTB2 Small polypeptide DEVIL 221.7e-0869.44Show/hide
Query:  HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        H  TSKCA+L+K+QR R+Y+LRRCATML C YI GD
Subjt:  HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

Q6IM82 Small polypeptide DEVIL 196.0e-0969.44Show/hide
Query:  HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        H  TSKC +L+K+QR R+Y+LRRCATML C YIHGD
Subjt:  HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

Q8L7D0 Small polypeptide DEVIL 132.0e-0443.48Show/hide
Query:  KNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        K  R   S S  +T K ++L K+Q+ R Y++RRC  ML+C + HGD
Subjt:  KNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

Arabidopsis top hitse value%identityAlignment
AT1G53708.1 ROTUNDIFOLIA like 91.2e-0969.44Show/hide
Query:  HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        H  TSKCA+L+K+QR R+Y+LRRCATML C YI GD
Subjt:  HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

AT2G29125.1 ROTUNDIFOLIA like 21.4e-0543.48Show/hide
Query:  KNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        K  R   S S  +T K ++L K+Q+ R Y++RRC  ML+C + HGD
Subjt:  KNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

AT3G14362.1 ROTUNDIFOLIA like 104.3e-1069.44Show/hide
Query:  HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD
        H  TSKC +L+K+QR R+Y+LRRCATML C YIHGD
Subjt:  HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD

AT3G55515.1 ROTUNDIFOLIA like 79.2e-0536.73Show/hide
Query:  TKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD
        T      K   +  T KC  L+K+QR R Y++RRC  ML+C   H +++
Subjt:  TKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD

AT4G13395.1 ROTUNDIFOLIA like 121.6e-0448.65Show/hide
Query:  RLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD
        R   +C  + KQQR R+Y+LRRC +MLLC + H   D
Subjt:  RLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGCTTTTTCAAGTGCATTGTAAATCCAAAACAAAAAACGAGAGGATGATGAAAAGCCATAGCCATAGGCTTACTTCCAAGTGTGCTGCTTTGATAAAGCAACA
AAGAGGCAGAATTTACCTCCTTCGCCGCTGTGCAACCATGTTGCTATGTTCCTATATTCATGGAGATCATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGCTTTTTCAAGTGCATTGTAAATCCAAAACAAAAAACGAGAGGATGATGAAAAGCCATAGCCATAGGCTTACTTCCAAGTGTGCTGCTTTGATAAAGCAACA
AAGAGGCAGAATTTACCTCCTTCGCCGCTGTGCAACCATGTTGCTATGTTCCTATATTCATGGAGATCATGACTAA
Protein sequenceShow/hide protein sequence
MAELFQVHCKSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD