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Clc07G15450 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G15450
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionmyb-like transcription factor family protein
Genome locationClcChr07:30045787..30047858
RNA-Seq ExpressionClc07G15450
SyntenyClc07G15450
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044592.1 myb-like protein J [Cucumis melo var. makuwa]4.2e-1740.76Show/hide
Query:  YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWK
        + +   I TT  N      +++  L SD+V     +  P     +  +T L  LPP P  +  ++N + ++    +  W   EH LFL G+ + GK  WK
Subjt:  YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWK

Query:  NIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL
         IA+ VVITK+HKQVASHAQKYF +   L K KRKR SIHDI TV+P  L +V A L
Subjt:  NIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL

TYK16992.1 myb-like protein J [Cucumis melo var. makuwa]3.2e-1751.82Show/hide
Query:  STQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDP
        +T L  LPP P  +  ++N    ++KI+   W   EH LFL G+ + GK  WK IA+ VVITK+HKQVASHAQKYF +   L K KRKR SIHDI TV+P
Subjt:  STQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDP

Query:  VLLMQVRARL
          L +V A L
Subjt:  VLLMQVRARL

XP_008454484.1 PREDICTED: myb-like protein J [Cucumis melo]4.2e-1740.76Show/hide
Query:  YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWK
        + +   I TT  N      +++  L SD+V     +  P     +  +T L  LPP P  +  ++N + ++    +  W   EH LFL G+ + GK  WK
Subjt:  YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWK

Query:  NIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL
         IA+ VVITK+HKQVASHAQKYF +   L K KRKR SIHDI TV+P  L +V A L
Subjt:  NIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL

XP_011654326.2 myb-like protein J [Cucumis sativus]2.7e-1645.3Show/hide
Query:  LAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIH
        L+  + LPS+ LPP P         ++  +   +    +W   EH LFL G+ + G+G WK IAN VVITK+H QVASHAQKYF RQ  P  K KR SIH
Subjt:  LAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIH

Query:  DINTVDPVLLMQVRARL
        DI T +P       AR+
Subjt:  DINTVDPVLLMQVRARL

XP_023522314.1 transcription factor SRM1-like [Cucurbita pepo subsp. pepo]2.6e-2262.77Show/hide
Query:  AAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL
        AA NG  S S   +  W   EH LFLVG+ IFG G WK+IAN+VV+TK+H QVASHAQK+  RQ +PKE+RKR SIHDI+TVDP LL +V ARL
Subjt:  AAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL

TrEMBL top hitse value%identityAlignment
A0A0A0KYZ4 HTH myb-type domain-containing protein1.3e-1645.3Show/hide
Query:  LAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIH
        L+  + LPS+ LPP P         ++  +   +    +W   EH LFL G+ + G+G WK IAN VVITK+H QVASHAQKYF RQ  P  K KR SIH
Subjt:  LAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIH

Query:  DINTVDPVLLMQVRARL
        DI T +P       AR+
Subjt:  DINTVDPVLLMQVRARL

A0A1S3BZH7 myb-like protein J2.1e-1740.76Show/hide
Query:  YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWK
        + +   I TT  N      +++  L SD+V     +  P     +  +T L  LPP P  +  ++N + ++    +  W   EH LFL G+ + GK  WK
Subjt:  YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWK

Query:  NIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL
         IA+ VVITK+HKQVASHAQKYF +   L K KRKR SIHDI TV+P  L +V A L
Subjt:  NIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL

A0A5A7TMR3 Myb-like protein J2.1e-1740.76Show/hide
Query:  YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWK
        + +   I TT  N      +++  L SD+V     +  P     +  +T L  LPP P  +  ++N + ++    +  W   EH LFL G+ + GK  WK
Subjt:  YLNSDDIKTTQQNLLALPPSDF--LSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWK

Query:  NIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL
         IA+ VVITK+HKQVASHAQKYF +   L K KRKR SIHDI TV+P  L +V A L
Subjt:  NIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDPVLLMQVRARL

A0A5D3CZL0 Myb-like protein J1.6e-1751.82Show/hide
Query:  STQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDP
        +T L  LPP P  +  ++N    ++KI+   W   EH LFL G+ + GK  WK IA+ VVITK+HKQVASHAQKYF +   L K KRKR SIHDI TV+P
Subjt:  STQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYF-NRQLLPKEKRKRPSIHDINTVDP

Query:  VLLMQVRARL
          L +V A L
Subjt:  VLLMQVRARL

A0A6J1CV56 transcription factor SRM1-like5.1e-1638.04Show/hide
Query:  MKSSEFDYLNSDDIKTTQQNLLALPPSD--FLSSDVVDFY------STRNWPL-----AAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDS
        M++SEF Y +SD   +        P ++   + +D++  Y      S+  W L     A +   P + L P P P K             K K   W   
Subjt:  MKSSEFDYLNSDDIKTTQQNLLALPPSD--FLSSDVVDFY------STRNWPL-----AAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDS

Query:  EHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD
        EH LFL+GL I+GKG WK+IA EV +TK+  QVASHAQK+++R+L  ++ RKR SI+DI TVD
Subjt:  EHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS15.4e-1544.44Show/hide
Query:  KGAEAAINGEASSSKIKKK-----DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVR
        KG     +G  S SK +++      W + EH LFL+GLD FGKG W++I+   VI+++  QVASHAQKYF R       R+R SIHDI +V      QV 
Subjt:  KGAEAAINGEASSSKIKKK-----DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVR

Query:  ARLGLPLT
        A+ G P+T
Subjt:  ARLGLPLT

Q8LH59 Transcription factor MYBS15.4e-1544.44Show/hide
Query:  KGAEAAINGEASSSKIKKK-----DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVR
        KG     +G  S SK +++      W + EH LFL+GLD FGKG W++I+   VI+++  QVASHAQKYF R       R+R SIHDI +V      QV 
Subjt:  KGAEAAINGEASSSKIKKK-----DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVR

Query:  ARLGLPLT
        A+ G P+T
Subjt:  ARLGLPLT

Q8S9H7 Transcription factor DIVARICATA1.8e-1549.43Show/hide
Query:  GAEAAINGEASSSKIKK-KDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD
        G   + +G  S  + KK   W + EH LFL+GL  +GKG W+NI+   VIT++  QVASHAQKYF RQL   + ++R SIHDI TV+
Subjt:  GAEAAINGEASSSKIKK-KDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD

Q9FKF9 Probable transcription factor At5g616207.3e-1244.3Show/hide
Query:  GEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD
        G+ +  K K K W + EH  FL+GL+  GKG W+ IA   V T++  QVASHAQKYF R  +  ++++R S+ DI+  D
Subjt:  GEASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD

Q9FNN6 Transcription factor SRM11.3e-1347.5Show/hide
Query:  GEASSSKIKKKD--WCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTV
        G++ S + ++K   W + EH LFL+GLD +GKG W++I+   V+T++  QVASHAQKYF R     + R+R SIHDI +V
Subjt:  GEASSSKIKKKD--WCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTV

Arabidopsis top hitse value%identityAlignment
AT1G49010.1 Duplicated homeodomain-like superfamily protein1.5e-1535.17Show/hide
Query:  DDIKTTQQNLLALPPSDFLSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAING------EASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWK
        +D+K  +   + LP        +VD  +      A   +  S      P P     ++ NG       A   + K   W + EH LFL+GLD FGKG W+
Subjt:  DDIKTTQQNLLALPPSDFLSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAING------EASSSKIKKKDWCDSEHGLFLVGLDIFGKGGWK

Query:  NIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD
        +I+   VI+++  QVASHAQKYF R       R+R SIHDI TV+
Subjt:  NIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD

AT3G11280.1 Duplicated homeodomain-like superfamily protein1.9e-1548.75Show/hide
Query:  NGEASSSKIKKK--DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINT
        +G   S + +KK   W + EH  FL+GL  +GKG W+NI+   V++K+  QVASHAQKY+ RQL   + ++RPSIHDI T
Subjt:  NGEASSSKIKKK--DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINT

AT3G11280.2 Duplicated homeodomain-like superfamily protein1.9e-1548.75Show/hide
Query:  NGEASSSKIKKK--DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINT
        +G   S + +KK   W + EH  FL+GL  +GKG W+NI+   V++K+  QVASHAQKY+ RQL   + ++RPSIHDI T
Subjt:  NGEASSSKIKKK--DWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINT

AT5G04760.1 Duplicated homeodomain-like superfamily protein2.4e-1853.75Show/hide
Query:  SSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLM
        S + +   W ++EH LFL+GL  +GKG W++I+  VV+T++  QVASHAQKYF RQ   K++RKR SIHDI TVD  L M
Subjt:  SSKIKKKDWCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLM

AT5G58900.1 Homeodomain-like transcriptional regulator1.1e-1556.72Show/hide
Query:  WCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD
        W + EH LFL+GL  +GKG W+NI+   VIT++  QVASHAQKYF RQL   + ++R SIHDI TV+
Subjt:  WCDSEHGLFLVGLDIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATTACAATAGCTACTTGCCTTCTTTCCCTGTTCCTCCAAATCAGACTCTGCAGTTTGATGAATCGTCATTCCCTTCGTATTACCAAATCGATAATTCAGTGTT
TGAGCAGTCGTCGATGACAATGCTGCCGCCGCCGCCGCCGCCGCCGCCGGTGATGAATATTCCGCCAAATCAGGCGATGACAATTGGCCTCCCTGGAGAATCCAAAACGA
ATGCGGAAATTGTTTGTGAGAATTATCTGAAGCAATATTTTAGTCCGTATGTTACCGATGATAATGTTGTGGATTATTCTAATTATGTTGATCCGTCGTTAATCAATTGG
AGCTGCGAGCGAGAGGTGAACTACGATGATTCGGCTCCGGTGATGAAGTCCTCAGAGTTTGATTACTTGAATTCCGATGATATTAAGACCACACAGCAGAATTTACTTGC
TTTGCCTCCGTCTGACTTCCTTTCTTCCGATGTCGTCGATTTTTACTCCACGAGGAATTGGCCGCTTGCGGCGGAGAGTAATTTGCCGTCAACGCAATTGCCGCCGCTGC
CTCCTCCGCCCAAAGGAGCTGAAGCTGCGATTAATGGCGAAGCCAGCTCATCGAAGATCAAGAAGAAGGATTGGTGCGATTCCGAGCACGGTTTATTTTTGGTGGGATTG
GATATATTTGGCAAGGGTGGTTGGAAAAACATAGCAAATGAAGTGGTAATCACAAAATCACACAAGCAAGTGGCTAGCCATGCTCAAAAGTACTTTAATCGTCAATTGTT
ACCAAAAGAGAAGCGCAAGAGGCCGAGTATTCATGATATCAATACCGTCGACCCTGTATTGTTGATGCAGGTGCGTGCCCGTCTCGGACTTCCACTAACATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATTACAATAGCTACTTGCCTTCTTTCCCTGTTCCTCCAAATCAGACTCTGCAGTTTGATGAATCGTCATTCCCTTCGTATTACCAAATCGATAATTCAGTGTT
TGAGCAGTCGTCGATGACAATGCTGCCGCCGCCGCCGCCGCCGCCGCCGGTGATGAATATTCCGCCAAATCAGGCGATGACAATTGGCCTCCCTGGAGAATCCAAAACGA
ATGCGGAAATTGTTTGTGAGAATTATCTGAAGCAATATTTTAGTCCGTATGTTACCGATGATAATGTTGTGGATTATTCTAATTATGTTGATCCGTCGTTAATCAATTGG
AGCTGCGAGCGAGAGGTGAACTACGATGATTCGGCTCCGGTGATGAAGTCCTCAGAGTTTGATTACTTGAATTCCGATGATATTAAGACCACACAGCAGAATTTACTTGC
TTTGCCTCCGTCTGACTTCCTTTCTTCCGATGTCGTCGATTTTTACTCCACGAGGAATTGGCCGCTTGCGGCGGAGAGTAATTTGCCGTCAACGCAATTGCCGCCGCTGC
CTCCTCCGCCCAAAGGAGCTGAAGCTGCGATTAATGGCGAAGCCAGCTCATCGAAGATCAAGAAGAAGGATTGGTGCGATTCCGAGCACGGTTTATTTTTGGTGGGATTG
GATATATTTGGCAAGGGTGGTTGGAAAAACATAGCAAATGAAGTGGTAATCACAAAATCACACAAGCAAGTGGCTAGCCATGCTCAAAAGTACTTTAATCGTCAATTGTT
ACCAAAAGAGAAGCGCAAGAGGCCGAGTATTCATGATATCAATACCGTCGACCCTGTATTGTTGATGCAGGTGCGTGCCCGTCTCGGACTTCCACTAACATCGTGAATGC
CCTAGTTGGTCAACTATCCTATGCATTCAAGAGCGAACAATCACATCCTATACATCACGAACAATTACGTTGATATTTGAACTTCCACTAAAAGCTTTCAATTTTTTATT
GCCCAAGCCCACTGTACAATTTTGCCACTTGTTTCAAACATACATTTATACTTTTTA
Protein sequenceShow/hide protein sequence
MDNYNSYLPSFPVPPNQTLQFDESSFPSYYQIDNSVFEQSSMTMLPPPPPPPPVMNIPPNQAMTIGLPGESKTNAEIVCENYLKQYFSPYVTDDNVVDYSNYVDPSLINW
SCEREVNYDDSAPVMKSSEFDYLNSDDIKTTQQNLLALPPSDFLSSDVVDFYSTRNWPLAAESNLPSTQLPPLPPPPKGAEAAINGEASSSKIKKKDWCDSEHGLFLVGL
DIFGKGGWKNIANEVVITKSHKQVASHAQKYFNRQLLPKEKRKRPSIHDINTVDPVLLMQVRARLGLPLTS