; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G15480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G15480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibonuclease
Genome locationClcChr07:30059001..30062715
RNA-Seq ExpressionClc07G15480
SyntenyClc07G15480
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0032299 - ribonuclease H2 complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001352 - Ribonuclease HII/HIII
IPR004649 - Ribonuclease H2, subunit A
IPR012337 - Ribonuclease H-like superfamily
IPR023160 - Ribonuclease HII, helix-loop-helix cap domain superfamily
IPR024567 - Ribonuclease HII/HIII domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582048.1 Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia]2.0e-15686.89Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFA                               DSKTLKEEKREELFE L
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        K NESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSK
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        RKSEEIESNAKGRCKFFQARKLEQLT F
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

XP_022955431.1 ribonuclease H2 subunit A [Cucurbita moschata]8.9e-15786.89Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFA                               DSK LKEEKREELFE L
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        K NESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSK
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        RKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

XP_022979887.1 ribonuclease H2 subunit A [Cucurbita maxima]5.2e-15786.89Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFA                               DSKTLKEEKREELFE L
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSK
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        RKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

XP_023527419.1 ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]8.1e-15887.5Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFA                               DSKTLKEEKREELFE L
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSK
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        RKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

XP_038902264.1 ribonuclease H2 subunit A [Benincasa hispida]2.5e-15987.8Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        MSSQYP+PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLKELSSLNFA                               DSKTLKEEKREELFEDL
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLG+GVLLTEVYVDTVGDPEKYRIKLSEKFP+VKFVVAKKADSLYPVVSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLS+VGITTSK
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        RKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ4 Ribonuclease1.4e-15586.28Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        MSSQ  LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLK+LSSLNFA                               DSKTLKEEKREELFEDL
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEV WESDKVDEDG T GSGKKQLRLSNVGITTSK
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        RKSEEIES+ KGRCKFFQARKLEQL+ F
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

A0A1S3BXP1 Ribonuclease6.2e-15686.89Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        MS Q  LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLKELSSLNFA                               DSKTLKEEKREELFEDL
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        KANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEV WESDKVDEDG T GSGKKQLRLSNVGITTSK
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        RKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

A0A5A7TT92 Ribonuclease6.2e-15686.89Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        MS Q  LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLKELSSLNFA                               DSKTLKEEKREELFEDL
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        KANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEV WESDKVDEDG T GSGKKQLRLSNVGITTSK
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        RKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

A0A6J1GTR5 Ribonuclease4.3e-15786.89Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFA                               DSK LKEEKREELFE L
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        K NESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSK
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        RKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

A0A6J1IPY0 Ribonuclease2.5e-15786.89Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFA                               DSKTLKEEKREELFE L
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSK
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        RKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

SwissProt top hitse value%identityAlignment
O75792 Ribonuclease H2 subunit A3.9e-6241.18Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDLKANE
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC    L +L +L  A                               DSKTL E +RE LF  ++  +
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDLKANE

Query:  SIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRD
         +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GL+   L  GV +T+V+VDTVG PE Y+ +L + FP ++  V  KAD+LYPVVS ASI AKV RD
Subjt:  SIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRD

Query:  RALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC-TSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKS
        +A+++W   E  +++  ++GSGYP DP TK WL++H   VFGFP  VRFSW T  T   K+  +V+WE         +A   ++ LR       TS   +
Subjt:  RALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC-TSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKS

Query:  EEIESNAKGRCKFFQARKLEQLT
        E  ++  +   ++F  R LE  T
Subjt:  EEIESNAKGRCKFFQARKLEQLT

Q2TBT5 Ribonuclease H2 subunit A1.6e-6041.46Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        +SS  P P    +PCV+G+DEAGRGPVLGPMVY   YC  S L++L +L  A                               DSKTL E +R+ LF  +
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVA
        + + + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GLV   L  GV + +V+VDTVG PE Y+ +L ++FP ++  V  KAD+LYPVVS ASI A
Subjt:  KAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVA

Query:  KVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVE-VLWESDKVDEDGGTAGSGKKQLRLSNVGITT
        KV RD+A++ W   E  +++  ++GSGYP DP TK WL  H   VFGFP  VRFSW T  S  +   E V WE     E G   G GK            
Subjt:  KVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVE-VLWESDKVDEDGGTAGSGKKQLRLSNVGITT

Query:  SKRKSEEIESNAKGRCKFFQARKLEQLT
            SE  ++  +   ++FQ R LE  T
Subjt:  SKRKSEEIESNAKGRCKFFQARKLEQLT

Q5U209 Ribonuclease H2 subunit A8.6e-6243.84Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDLKAN-
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  A                               DSKTL E +RE LF  ++ + 
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDLKAN-

Query:  ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTR
        + +GWA+D++ P  +S+ ML +VK NLN +SHD+A GL+   +   V +T+V+VDTVG PE Y+ +L ++FP ++  V  KADSL+PVVS ASI+AKV R
Subjt:  ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTR

Query:  DRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDVVEVLWESDKVDED
        D+A++ W   E+ + +  ++GSGYP DP TK WL  H   VFGFP  VRFSW T  +   K+   V WE    +ED
Subjt:  DRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDVVEVLWESDKVDED

Q9CWY8 Ribonuclease H2 subunit A3.9e-6244.57Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDLKAN-
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  A                               DSKTL E +RE LF  ++ + 
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDLKAN-

Query:  ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTR
        + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GL+   L   V +T+V+VDTVG PE Y+ +L + FP ++  V  KADSL+PVVS ASI AKV R
Subjt:  ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTR

Query:  DRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDVVEVLWESDKVDED
        D+A++ W   E  +++  ++GSGYP DP TK WL  H   VFGFP  VRFSW T  +   K+  +V+WE  + +ED
Subjt:  DRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDVVEVLWESDKVDED

Q9SEZ6 Ribonuclease H2 subunit A9.1e-12064.63Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FA                               DSKTLKEEKREEL+E L
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        K ++S+GWAVDVIDPRELS+KML K K NLNEISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDRAL+EW +EET E+++RNFGSGYPGDP TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV WE+D+ +E+ G   S K+Q +LS+ G  T +
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        ++SEEIES+ KGRCKF QARK++QLT F
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

Arabidopsis top hitse value%identityAlignment
AT2G25100.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.5e-12164.63Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FA                               DSKTLKEEKREEL+E L
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        K ++S+GWAVDVIDPRELS+KML K K NLNEISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDRAL+EW +EET E+++RNFGSGYPGDP TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV WE+D+ +E+ G   S K+Q +LS+ G  T +
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        ++SEEIES+ KGRCKF QARK++QLT F
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF

AT2G25100.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.9e-11060.67Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FA                               DSKTLKEEKREEL+E L
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDL

Query:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK
        K ++S+GWAVDVIDPRELS+KML                    KVL MGVLLTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAK
Subjt:  KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAK

Query:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK
        VTRDRAL+EW +EET E+++RNFGSGYPGDP TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV WE+D+ +E+ G   S K+Q +LS+ G  T +
Subjt:  VTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSK

Query:  RKSEEIESNAKGRCKFFQARKLEQLTHF
        ++SEEIES+ KGRCKF QARK++QLT F
Subjt:  RKSEEIESNAKGRCKFFQARKLEQLTHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGCAATATCCACTCCCAAAATGGGCTTCCAAGCCTTGCGTAATGGGCATCGATGAAGCTGGTCGAGGCCCCGTTTTAGGGCCAATGGTGTATGGATGCTTGTA
CTGCGCTACTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGGTTTAGCTTCTTTGCAATTTTTTCTTTTAACTGTCGTTCATCATTTACCTATTTCGTTTACTT
CTCTTCCAACTTTTGATGTTTTGCATTTAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGATGGGCTGTT
GATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTCACCAAGGTTCTAGG
CATGGGAGTTCTTTTAACTGAGGTCTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATTAAGTTGTCTGAGAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGA
AAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACGGCTGAAAACATGCAT
AGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGATTCCCCACATTAGTCCGCTTCAGTTGGGGTAC
CTGCACTTCATATTTCAAAGACGTCGTTGAAGTATTATGGGAGTCGGACAAAGTGGATGAAGATGGGGGAACGGCTGGAAGTGGTAAGAAACAATTAAGACTAAGCAATG
TTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGA
mRNA sequenceShow/hide mRNA sequence
GAGAAACTCGAATTTGACGTAAACCTCCTTTAGTCATTTCCCCCCAAATTTGGTTAATCCATCCGGCGGACCCAAAGAGTCAGAACCAAAGGAGCTTCCATGGCGGGAAC
GACCTAAAAGAAGTGAACTCACAATCGAAGAAACACTCAAGTAAAGAGAGGAAGAGAGATTTTCTTCTAAACCGACGTAGCGACTAGCGAGTAGAAATCAGCAATGTCTT
CGCAATATCCACTCCCAAAATGGGCTTCCAAGCCTTGCGTAATGGGCATCGATGAAGCTGGTCGAGGCCCCGTTTTAGGGCCAATGGTGTATGGATGCTTGTACTGCGCT
ACTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGGTTTAGCTTCTTTGCAATTTTTTCTTTTAACTGTCGTTCATCATTTACCTATTTCGTTTACTTCTCTTCC
AACTTTTGATGTTTTGCATTTAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGATGGGCTGTTGATGTCA
TAGATCCTCGAGAACTTTCATCCAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTCACCAAGGTTCTAGGCATGGGA
GTTCTTTTAACTGAGGTCTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATTAAGTTGTCTGAGAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGA
TAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACGGCTGAAAACATGCATAGAAACT
TTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGATTCCCCACATTAGTCCGCTTCAGTTGGGGTACCTGCACT
TCATATTTCAAAGACGTCGTTGAAGTATTATGGGAGTCGGACAAAGTGGATGAAGATGGGGGAACGGCTGGAAGTGGTAAGAAACAATTAAGACTAAGCAATGTTGGTAT
CACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGAATGTTTGATT
ACATTCTATGTTCCAACCATCCTCCACTTGATTAATTAAGTAGCTGATAAGCAATAGTTTTGGTGTGTACTAACCGGGTGTTCTGCTTAGAAAACATATTTTAGATGGTA
ACTGCCATGTACTTGACTTTCTTTAAAGGTATT
Protein sequenceShow/hide protein sequence
MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFAGLASLQFFLLTVVHHLPISFTSLPTFDVLHLDSKTLKEEKREELFEDLKANESIGWAV
DVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMH
RNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF