; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G15705 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G15705
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiondisease resistance protein RGA2-like
Genome locationClcChr07:30220753..30221324
RNA-Seq ExpressionClc07G15705
SyntenyClc07G15705
Gene Ontology termsNA
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152283.3 putative disease resistance protein RGA3 isoform X1 [Cucumis sativus]2.5e-3152.05Show/hide
Query:  RSLKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH---
        R LKKLHIYGC +EVT LPK+LQLCTSIEDL I                                      +  IIECSQDCDF+PLMQL SLVKLH   
Subjt:  RSLKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH---

Query:  --------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLIH
                 P+QL+H+IALRS +             +GNLTSLEVLGLYYC NLKQFPS KAMQCLTQLIH
Subjt:  --------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLIH

XP_008453956.1 PREDICTED: putative disease resistance protein RGA3 isoform X1 [Cucumis melo]5.8e-2848.81Show/hide
Query:  LKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH-----
        LKKLHIYGCD EVT+LPK+LQLCTSIEDL I                                      +  IIECSQDCDF+PLMQL SLVKLH     
Subjt:  LKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH-----

Query:  ------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI
               P+QL+H+IALRS +             +GN TSLE LGL  C+NL+QFPS KAMQCLTQL+
Subjt:  ------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI

XP_008453957.1 PREDICTED: putative disease resistance protein RGA3 isoform X2 [Cucumis melo]5.8e-2848.81Show/hide
Query:  LKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH-----
        LKKLHIYGCD EVT+LPK+LQLCTSIEDL I                                      +  IIECSQDCDF+PLMQL SLVKLH     
Subjt:  LKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH-----

Query:  ------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI
               P+QL+H+IALRS +             +GN TSLE LGL  C+NL+QFPS KAMQCLTQL+
Subjt:  ------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI

XP_031740228.1 putative disease resistance protein RGA3 isoform X2 [Cucumis sativus]2.5e-3152.05Show/hide
Query:  RSLKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH---
        R LKKLHIYGC +EVT LPK+LQLCTSIEDL I                                      +  IIECSQDCDF+PLMQL SLVKLH   
Subjt:  RSLKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH---

Query:  --------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLIH
                 P+QL+H+IALRS +             +GNLTSLEVLGLYYC NLKQFPS KAMQCLTQLIH
Subjt:  --------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLIH

XP_038881404.1 putative disease resistance protein RGA3 [Benincasa hispida]9.5e-1536.81Show/hide
Query:  MFGCGSEDGIRSLKKLHIYGCDNEVTKLPKELQLCTSIEDLNI---------------------------------------KFIIIECSQDCDFTPLMQ
        +FG  +EDG++SL+ LHI+ CD   T LP  LQ C SIEDL I                                       +  II   QD DF  L+ 
Subjt:  MFGCGSEDGIRSLKKLHIYGCDNEVTKLPKELQLCTSIEDLNI---------------------------------------KFIIIECSQDCDFTPLMQ

Query:  LPSLVKL------------HFPRQLDHVIALRSF----------FTRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI
        LPSLVKL              P QL+ + +LR+               +GNLTSLE LGLYYC+NLK  PS  AM  LT+LI
Subjt:  LPSLVKL------------HFPRQLDHVIALRSF----------FTRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI

TrEMBL top hitse value%identityAlignment
A0A0A0KU03 Uncharacterized protein7.4e-2146.76Show/hide
Query:  NEVTKLPKELQLCTSIEDLNIKFIIIECSQDCDFTPLMQLPSLVKL-----------HFPRQLDHVIALRSF----------FTRMVGNLTSLEVLGLYY
        N + K P+ L    +++++    II ECSQDCDFTPLMQL SLV L             P+QL H+ ALRS               +GNL SLEVLGLYY
Subjt:  NEVTKLPKELQLCTSIEDLNIKFIIIECSQDCDFTPLMQLPSLVKL-----------HFPRQLDHVIALRSF----------FTRMVGNLTSLEVLGLYY

Query:  CKNLKQFPSTKAMQCLTQLIHSCGCLWMSTPTRVHKSFC
        C++LKQFPS KA+  ++  I  CGCLW+ST T+V + FC
Subjt:  CKNLKQFPSTKAMQCLTQLIHSCGCLWMSTPTRVHKSFC

A0A0A0KXG9 Uncharacterized protein1.2e-3152.05Show/hide
Query:  RSLKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH---
        R LKKLHIYGC +EVT LPK+LQLCTSIEDL I                                      +  IIECSQDCDF+PLMQL SLVKLH   
Subjt:  RSLKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH---

Query:  --------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLIH
                 P+QL+H+IALRS +             +GNLTSLEVLGLYYC NLKQFPS KAMQCLTQLIH
Subjt:  --------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLIH

A0A1S3BYA2 putative disease resistance protein RGA3 isoform X12.8e-2848.81Show/hide
Query:  LKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH-----
        LKKLHIYGCD EVT+LPK+LQLCTSIEDL I                                      +  IIECSQDCDF+PLMQL SLVKLH     
Subjt:  LKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH-----

Query:  ------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI
               P+QL+H+IALRS +             +GN TSLE LGL  C+NL+QFPS KAMQCLTQL+
Subjt:  ------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI

A0A1S3BYQ0 putative disease resistance protein RGA3 isoform X22.8e-2848.81Show/hide
Query:  LKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH-----
        LKKLHIYGCD EVT+LPK+LQLCTSIEDL I                                      +  IIECSQDCDF+PLMQL SLVKLH     
Subjt:  LKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH-----

Query:  ------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI
               P+QL+H+IALRS +             +GN TSLE LGL  C+NL+QFPS KAMQCLTQL+
Subjt:  ------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI

A0A5D3D021 Putative disease resistance protein RGA3 isoform X12.8e-2848.81Show/hide
Query:  LKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH-----
        LKKLHIYGCD EVT+LPK+LQLCTSIEDL I                                      +  IIECSQDCDF+PLMQL SLVKLH     
Subjt:  LKKLHIYGCDNEVTKLPKELQLCTSIEDLNI--------------------------------------KFIIIECSQDCDFTPLMQLPSLVKLH-----

Query:  ------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI
               P+QL+H+IALRS +             +GN TSLE LGL  C+NL+QFPS KAMQCLTQL+
Subjt:  ------FPRQLDHVIALRSFF----------TRMVGNLTSLEVLGLYYCKNLKQFPSTKAMQCLTQLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGATGTGGTAGTGAGGATGGTATTAGAAGCCTTAAAAAGCTACATATTTATGGATGTGATAATGAAGTGACAAAATTGCCAAAAGAGCTACAACTTTGC
ACTTCCATCGAGGATCTAAACATTAAATTTATAATCATTGAATGCTCACAAGATTGTGACTTTACCCCTCTTATGCAACTTCCTTCACTTGTGAAGCTTCATTTT
CCTCGACAACTCGACCATGTCATTGCCTTAAGATCTTTTTTTACCAGAATGGTTGGGAACCTTACATCTTTAGAAGTTTTGGGACTTTACTATTGTAAAAATTTG
AAACAGTTTCCTTCAACGAAAGCCATGCAGTGCCTCACCCAATTAATTCATTCATGTGGATGTCTTTGGATGTCCACACCTACCCGAGTTCACAAATCTTTTTGC
CATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGATGTGGTAGTGAGGATGGTATTAGAAGCCTTAAAAAGCTACATATTTATGGATGTGATAATGAAGTGACAAAATTGCCAAAAGAGCTACAACTTTGC
ACTTCCATCGAGGATCTAAACATTAAATTTATAATCATTGAATGCTCACAAGATTGTGACTTTACCCCTCTTATGCAACTTCCTTCACTTGTGAAGCTTCATTTT
CCTCGACAACTCGACCATGTCATTGCCTTAAGATCTTTTTTTACCAGAATGGTTGGGAACCTTACATCTTTAGAAGTTTTGGGACTTTACTATTGTAAAAATTTG
AAACAGTTTCCTTCAACGAAAGCCATGCAGTGCCTCACCCAATTAATTCATTCATGTGGATGTCTTTGGATGTCCACACCTACCCGAGTTCACAAATCTTTTTGC
CATTGA
Protein sequenceShow/hide protein sequence
MFGCGSEDGIRSLKKLHIYGCDNEVTKLPKELQLCTSIEDLNIKFIIIECSQDCDFTPLMQLPSLVKLHFPRQLDHVIALRSFFTRMVGNLTSLEVLGLYYCKNL
KQFPSTKAMQCLTQLIHSCGCLWMSTPTRVHKSFCH