; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G15880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G15880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionU3 small nucleolar ribonucleoprotein protein IMP3
Genome locationClcChr07:30350241..30352684
RNA-Seq ExpressionClc07G15880
SyntenyClc07G15880
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005840 - ribosome (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0034457 - Mpp10 complex (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0030515 - snoRNA binding (molecular function)
InterPro domainsIPR001912 - Ribosomal protein S4/S9, N-terminal
IPR002942 - RNA-binding S4 domain
IPR022801 - Ribosomal protein S4/S9
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041194.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]3.4e-9798.91Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC

TYK23826.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]1.7e-9698.36Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV MLKKMNEKDPFR ELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC

XP_004153543.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus]4.4e-9798.36Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC

XP_022955364.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita moschata]1.1e-9596.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC

XP_038880355.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Benincasa hispida]2.6e-9798.36Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMN+KDPFRLE+TEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC

TrEMBL top hitse value%identityAlignment
A0A0A0KZG3 S4 RNA-binding domain-containing protein2.1e-9798.36Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC

A0A5D3BRX0 U3 small nucleolar ribonucleoprotein IMP3-like isoform X11.6e-9798.91Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC

A0A5D3DJI4 U3 small nucleolar ribonucleoprotein IMP3-like isoform X18.2e-9798.36Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV MLKKMNEKDPFR ELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDAINC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC

A0A6J1GW22 U3 small nucleolar ribonucleoprotein protein IMP35.3e-9696.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC

A0A6J1J025 U3 small nucleolar ribonucleoprotein protein IMP31.5e-9596.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLV MLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC

SwissProt top hitse value%identityAlignment
O13835 U3 small nucleolar ribonucleoprotein protein imp31.8e-4849.18Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKR-EGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDR
        MR LK HEQKLL+KV+FL +K  +  HR+  VM RYHI+ R++Y+KY+ +C   ++L + L  ++  DPFRL+    LLEKL++MG++P++  + ++ ++
Subjt:  MRKLKFHEQKLLKKVNFLEWKR-EGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDR

Query:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAI
         +VS+ CRRRL  ++ +L+ ++ + EA   IEQGH+RVGP  +TDPA+LVTR++EDF+TW D+SKIKR + +YNDKLDDYD +
Subjt:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAI

P32899 U3 small nucleolar ribonucleoprotein protein IMP35.3e-5353.89Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDRL
        +RKLK HEQKLLKKV+FLEWK++ GHR+ QVM  YHI  R+DY KY+ +C  +++L N L  +   DPFR +  + LL+KLY MGV+ T+  + +L +++
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSL-NLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        +VS+ CRRRL  ++ RLK AE +++AV +IEQGH+RVGP  + DPA+LVTRNMED++TWVD+SKIK+ +L+Y +++DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q3T0M3 U3 small nucleolar ribonucleoprotein protein IMP31.5e-5557.22Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ L R V++L   L+ + E+DPFR+  +  LL+KLY +G++PTR S  LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q921Y2 U3 small nucleolar ribonucleoprotein protein IMP31.8e-5657.78Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R++Y +Y+ L R V++L   L+ + E+DPFR+  +  LL+KLY MG++PTR SL LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        S SSFCRRRL T+L++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q9NV31 U3 small nucleolar ribonucleoprotein protein IMP32.0e-5557.22Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ L R V++L   L+ + E+D FR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Arabidopsis top hitse value%identityAlignment
AT5G15200.1 Ribosomal protein S41.0e-0624.31Show/hide
Query:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +       ++     L  ++EK P R+   E LL ++   G++   Q+ L+    L+V +F  RRL T++ +   
Subjt:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSS
        A+ +  +   I Q HIRVG + V  P+F+V  + +  I +  +S
Subjt:  AEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSS

AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein6.2e-8178.45Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS
        MRKLK+HE+KL+KKVNFLEWKREG HRE ++ +RYH+  RDDYKKYS LCR VQKL N++K+M+  DPFR+++T+ LLEKLYNMGVIPTR+SL L +RLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAI
        VSSFCRRRLSTVLV LKFAEH +EAVTYIEQGH+RVGPET+TDPAFLVTRNMEDFITWVDSSKIKRKVL+YND LDDYD +
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAI

AT5G39850.1 Ribosomal protein S47.8e-0726.15Show/hide
Query:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +       ++     L  ++EK+P R+   E LL ++   G++  T+  L+    L+V +F  RRL T++ +   
Subjt:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRVGPETVTDPAFLV
        A+ +  A   I Q HIRVG + V  P+F+V
Subjt:  AEHLREAVTYIEQGHIRVGPETVTDPAFLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGCTAAAGTTTCACGAGCAGAAGCTTTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCATAGAGAAGCCCAAGTAATGCATCGCTATCACAT
TACTGGACGGGACGATTACAAGAAATATTCGAGCTTGTGCCGGGGTGTTCAGAAGCTAGTCAACATGTTGAAGAAAATGAACGAGAAAGACCCTTTTCGATTGGAATTGA
CTGAGAAGCTCCTCGAAAAGCTGTACAATATGGGTGTGATACCAACCCGACAGAGCTTGAATTTATGTGATCGCCTGTCAGTGTCATCCTTCTGCAGACGGAGGCTATCA
ACGGTGTTGGTACGTTTGAAGTTTGCCGAGCACTTGAGGGAAGCTGTTACATATATTGAGCAAGGGCACATTAGAGTTGGTCCAGAGACGGTTACTGACCCCGCATTTCT
AGTTACTAGGAATATGGAGGACTTCATAACATGGGTTGATTCATCAAAGATAAAGAGAAAAGTTCTACAATACAATGATAAGTTGGATGATTACGATGCCATCAACTGTT
GA
mRNA sequenceShow/hide mRNA sequence
CTTAGCCCACCCACCTAAACTTGGGCTCAACGAGGTAGCCCTACTACCCCAAGGCCCAGTCCAGACTTTAGGGTTTTTAATTTTCTAAACCCTAAAACTAAATCTATTTC
TTTCCCCCAACTCTCTGCCGTCTCCCCGTCGTCCTGTCGCCGTCGCCGCCGGTCCACTTCTCTTTCTCTCTTTTCTGTTCTTCCACGTCCTCCTCAATCCTCTCCCTCGA
CCCTTCCCCATAGAGATTATTGTTCGAACGACATCGAGACCTTCCTCAGCTGCTAAGTGTTTTGAGGTGAAACAGAAGAAAGGATGAGGAAGCTAAAGTTTCACGAGCAG
AAGCTTTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCATAGAGAAGCCCAAGTAATGCATCGCTATCACATTACTGGACGGGACGATTACAAGAAATA
TTCGAGCTTGTGCCGGGGTGTTCAGAAGCTAGTCAACATGTTGAAGAAAATGAACGAGAAAGACCCTTTTCGATTGGAATTGACTGAGAAGCTCCTCGAAAAGCTGTACA
ATATGGGTGTGATACCAACCCGACAGAGCTTGAATTTATGTGATCGCCTGTCAGTGTCATCCTTCTGCAGACGGAGGCTATCAACGGTGTTGGTACGTTTGAAGTTTGCC
GAGCACTTGAGGGAAGCTGTTACATATATTGAGCAAGGGCACATTAGAGTTGGTCCAGAGACGGTTACTGACCCCGCATTTCTAGTTACTAGGAATATGGAGGACTTCAT
AACATGGGTTGATTCATCAAAGATAAAGAGAAAAGTTCTACAATACAATGATAAGTTGGATGATTACGATGCCATCAACTGTTGAGATGCTGTCCAAGTTTTATTTCTTT
TTCCTTCATCTTGTATGAATCCTTTTTCTCGCACTCTATGTAGCGTGAGTTTTATAATCAATACATAATTTTGCATCGTTGTTTGTTACAAGCCTGATATCTCAGTTTGA
TTGATGATGCCGCGTGGTTGGGCTTCTA
Protein sequenceShow/hide protein sequence
MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLS
TVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAINC