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Clc07G16200 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G16200
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationClcChr07:30684910..30685352
RNA-Seq ExpressionClc07G16200
SyntenyClc07G16200
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581748.1 hypothetical protein SDJN03_21750, partial [Cucurbita argyrosperma subsp. sororia]5.6e-3174.49Show/hide
Query:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        MKK  P+ +  +F+A M   LSGARVAEAV CSP ELSSCAGAI +SSS PSS CC+KLREQ+PCLCGYIRNP+LRPYVQSPGA++VA+KCGVPFPSC
Subjt:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

XP_022143278.1 non-specific lipid-transfer protein 2-like [Momordica charantia]2.9e-2768.75Show/hide
Query:  KVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        K  P+  + + V A+   L+GA VAEAVTCSP +LSSCAGAI SSS+ PS+ CCSKLREQ+PCLCGY++NP+LRPYVQSPGAK+VAS CGV FPSC
Subjt:  KVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

XP_022148226.1 non-specific lipid-transfer protein 2-like [Momordica charantia]8.7e-2470.11Show/hide
Query:  IFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        + V A+A  L GARV EAVTCSP+ELS C  AI S    PSS CCSKLREQ+PCLCGY+RNP+L+PYVQSP AK VAS CGV FPSC
Subjt:  IFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

XP_022955426.1 non-specific lipid-transfer protein 2-like [Cucurbita moschata]7.3e-3174.49Show/hide
Query:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        MKK  P+ +  +F+A M   LSGARVAEAV CSP ELSSCAGAI +SSS PSS CC+KLREQ+PCLCGYIRNP+LRPYVQSPGA+ VA+KCGVPFPSC
Subjt:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

XP_038897809.1 non-specific lipid-transfer protein 2-like [Benincasa hispida]1.9e-3174.49Show/hide
Query:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        MKKV  VR +C+F+AAMA  LS ARVAEAV C+P EL+SCAGAI SSSSNPS  CCSKL+EQ+PCLCGY+R+PSLRPYV +PGAK VASKCGVP P+C
Subjt:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

TrEMBL top hitse value%identityAlignment
A0A5N5N2V7 AAI domain-containing protein3.6e-2364.71Show/hide
Query:  VAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        +A + +FL+ A+V+EAVTC+P ELSSC GAI +SSS PS+ CCSKL+EQ+PCLCGY++NP+L+ +V SPGA+ VAS CGVP+PSC
Subjt:  VAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

A0A6A1VEE6 Putative non-specific lipid-transfer protein AKCS94.7e-2359.18Show/hide
Query:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        MKK   V  +C  VA   +       AEAVTCSP+ELSSC+ AI +SS+ PS  CC+KL+EQ PCLCGY++NP+LR YV SPGA+ VAS CGVPFP C
Subjt:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

A0A6J1CQB8 non-specific lipid-transfer protein 2-like1.4e-2768.75Show/hide
Query:  KVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        K  P+  + + V A+   L+GA VAEAVTCSP +LSSCAGAI SSS+ PS+ CCSKLREQ+PCLCGY++NP+LRPYVQSPGAK+VAS CGV FPSC
Subjt:  KVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

A0A6J1D4R3 non-specific lipid-transfer protein 2-like4.2e-2470.11Show/hide
Query:  IFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        + V A+A  L GARV EAVTCSP+ELS C  AI S    PSS CCSKLREQ+PCLCGY+RNP+L+PYVQSP AK VAS CGV FPSC
Subjt:  IFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

A0A6J1GTR0 non-specific lipid-transfer protein 2-like3.6e-3174.49Show/hide
Query:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        MKK  P+ +  +F+A M   LSGARVAEAV CSP ELSSCAGAI +SSS PSS CC+KLREQ+PCLCGYIRNP+LRPYVQSPGA+ VA+KCGVPFPSC
Subjt:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 24.3e-1036.67Show/hide
Query:  VICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        V+ + VA +A    G       +C+  +L+ CAGAI +  + P++ CCS LR QQ C C + ++P    YV SP A+   S CG+  P+C
Subjt:  VICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

P20145 Probable non-specific lipid-transfer protein2.7e-1238.78Show/hide
Query:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        M+K   V V+ + V  +A   +GA       C P++L+ CA AI    + PS  CC  LR QQ CLC Y+++P+   YV SP A+   + CG+P P C
Subjt:  MKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

P82353 Non-specific lipid-transfer protein 21.1e-1862.32Show/hide
Query:  VTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        VTCSP +LS C G I S + +P++ CC KLREQ+PCLCGY++NPSLR YV SP A+ +AS CGVP P C
Subjt:  VTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

P86809 Non-specific lipid-transfer protein 26.5e-1455.56Show/hide
Query:  TCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGV
        TCS  +LS C  AI + ++ PS+ CC+KL+EQ+PCLCGY+++P+L+ YV SPGA+  AS CGV
Subjt:  TCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGV

Q43681 Probable non-specific lipid-transfer protein AKCS97.6e-2355.56Show/hide
Query:  TMKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        TMK    + V+C  V      +    VAEAVTC+P+ELSSC  AI +  S PSS CCSKL+ Q+PCLC YI+NPSL+ YV SPGAK V S CGV +P+C
Subjt:  TMKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.6e-2357.3Show/hide
Query:  ICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        + +   A A+ L    VAE VTCSP +L+SCA A+ +SSS PS  CC+KLREQQPCLCGY+RNP+LR YV SP A+ V++ C +P PSC
Subjt:  ICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.8e-1240.7Show/hide
Query:  FVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        F AA+    +G      VTC   +L  C  AI +    PS  CC+KL EQQ CLCG+ +NP+   Y+ SP A+ V   C V +P+C
Subjt:  FVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.7e-1439.78Show/hide
Query:  PVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        PV   C  +  + V     RVA    C+P++LS C   I    S PS  CCSK++EQQ C+C Y++NP+ + ++ SP AK +A+ C  P+P C
Subjt:  PVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.3e-2153.33Show/hide
Query:  VICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        ++ +F  A  + +  A  AEAVTCSP +LS CA AI +SSS PS+ CC+KL+EQ+PCLCGY+RNPSLR +V +P A+ V+  C +P P C
Subjt:  VICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.4e-1344.57Show/hide
Query:  VRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC
        V V  + + A  V LSG      VTC   +LSSCA  + +    PS+ CC KL+EQQPC C YI++P    YV S  AK   + CGVP+P+C
Subjt:  VRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATGGAGAAATTAATAAAAGAGACACAATGAAGAAAGTTGGTCCGGTGAGAGTTATTTGTATTTTCGTGGCGGCAATGGCTGTTTTTCTCAGCGGAGCTCGTGT
GGCGGAGGCGGTGACTTGCAGCCCTTCGGAGCTGAGCTCATGTGCGGGGGCAATCTGGTCGTCATCGTCGAATCCATCGAGCTTTTGCTGCAGTAAGTTGAGAGAGCAAC
AACCATGCCTTTGTGGGTACATAAGGAACCCATCCTTAAGGCCTTATGTGCAATCTCCTGGCGCTAAATCTGTGGCTTCCAAGTGTGGTGTTCCCTTCCCCAGCTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATGGAGAAATTAATAAAAGAGACACAATGAAGAAAGTTGGTCCGGTGAGAGTTATTTGTATTTTCGTGGCGGCAATGGCTGTTTTTCTCAGCGGAGCTCGTGT
GGCGGAGGCGGTGACTTGCAGCCCTTCGGAGCTGAGCTCATGTGCGGGGGCAATCTGGTCGTCATCGTCGAATCCATCGAGCTTTTGCTGCAGTAAGTTGAGAGAGCAAC
AACCATGCCTTTGTGGGTACATAAGGAACCCATCCTTAAGGCCTTATGTGCAATCTCCTGGCGCTAAATCTGTGGCTTCCAAGTGTGGTGTTCCCTTCCCCAGCTGCTAG
Protein sequenceShow/hide protein sequence
MKNGEINKRDTMKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC