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Clc07G16210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G16210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLipid transfer protein
Genome locationClcChr07:30687588..30688333
RNA-Seq ExpressionClc07G16210
SyntenyClc07G16210
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53818.1 hypothetical protein Csa_014950 [Cucumis sativus]2.2e-3172.92Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MK L  T L LLVV MAALLT A +A+A+TC+TM LSPC+GA+TSTAPP   CCSKLREQQPCFC Y+KNPSLGGYV+S RAK +IS CGVP+PKC
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

XP_008444080.1 PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo]3.4e-3275Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MK L  T L LLVV + ALLT A +AEAVTC+TM+LSPC+GAITSTAPP   CCSKLREQQPCFCGY+KNPSLGGYV+S RAK +IS CGVP PKC
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

XP_022143278.1 non-specific lipid-transfer protein 2-like [Momordica charantia]1.9e-2769.79Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MK LPIT L LLVV + ALLT AH+AEAVTCS ++LS C GAI+S+  P A+CCSKLREQ+PC CGYLKNP+L  YVQSP AKTV S CGV FP C
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

XP_022148226.1 non-specific lipid-transfer protein 2-like [Momordica charantia]9.0e-2567.35Show/hide
Query:  MKKLPIT--RLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MKKL IT  RL LLVV +AALL  A + EAVTCS  ELSPC+ AI S  PP +ACCSKLREQ+PC CGYL+NP+L  YVQSP AK V S CGV FP C
Subjt:  MKKLPIT--RLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

XP_038904866.1 non-specific lipid-transfer protein 2-like [Benincasa hispida]1.3e-3481.25Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MK L  T L LLVV MAALLT A LAEAVTCSTMELSPC+GA TSTAPP AACCSKL+EQQPCFCGY+KNP LG YV+SPRAKTVIS CGV FPKC
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

TrEMBL top hitse value%identityAlignment
A0A0A0KW85 AAI domain-containing protein1.1e-3172.92Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MK L  T L LLVV MAALLT A +A+A+TC+TM LSPC+GA+TSTAPP   CCSKLREQQPCFC Y+KNPSLGGYV+S RAK +IS CGVP+PKC
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

A0A0A0L100 AAI domain-containing protein1.8e-3171.88Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MK L  T L LLVV MAAL+T A +A+A+TC+TM LSPC+GA+TSTAPP   CCSKLREQQPCFC Y+KNPSLGGYV+S RAK +IS CGVP+PKC
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

A0A1S3B931 non-specific lipid-transfer protein 2-like1.7e-3275Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MK L  T L LLVV + ALLT A +AEAVTC+TM+LSPC+GAITSTAPP   CCSKLREQQPCFCGY+KNPSLGGYV+S RAK +IS CGVP PKC
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

A0A5A7VAB3 Non-specific lipid-transfer protein 2-like1.7e-3275Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MK L  T L LLVV + ALLT A +AEAVTC+TM+LSPC+GAITSTAPP   CCSKLREQQPCFCGY+KNPSLGGYV+S RAK +IS CGVP PKC
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

A0A6J1CQB8 non-specific lipid-transfer protein 2-like9.4e-2869.79Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MK LPIT L LLVV + ALLT AH+AEAVTCS ++LS C GAI+S+  P A+CCSKLREQ+PC CGYLKNP+L  YVQSP AKTV S CGV FP C
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 21.8e-1241.67Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        M++L +  L L V  +AA           +C+  +L+ C GAI   A P AACCS LR QQ CFC + K+P  G YV SP A+  +S CG+  P C
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

P82353 Non-specific lipid-transfer protein 22.8e-2164.71Show/hide
Query:  VTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        VTCS ++LSPC+G I S AP P  CC KLREQ+PC CGYLKNPSL  YV SP A+ + S CGVP P+C
Subjt:  VTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

P82900 Non-specific lipid-transfer protein 2G3.7e-1341.67Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        MKK  +T L L +V +AA    A  A    C   +L+ C  AI S A P   CC  LR QQ CFC Y K+P+ G Y++SP A+  ++ CG+  P C
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

P86809 Non-specific lipid-transfer protein 26.5e-1859.7Show/hide
Query:  TCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        TCS ++LSPC+ AIT   PP AACC+KL+EQ+PC CGYLK+P+L  YV SP A+   S CGV   KC
Subjt:  TCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

Q43681 Probable non-specific lipid-transfer protein AKCS97.0e-2050Show/hide
Query:  KLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        K+ ++ +C +VV    L+    +AEAVTC+  ELS C+ AIT  + P + CCSKL+ Q+PC C Y+KNPSL  YV SP AK V+S CGV +P C
Subjt:  KLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.2e-2152.33Show/hide
Query:  LLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        +L +  A LL    +AE VTCS M+L+ C  A+TS++PP  ACC+KLREQQPC CGY++NP+L  YV SP A+ V + C +P P C
Subjt:  LLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.3e-1539.39Show/hide
Query:  ITRLCLLVVTMAALLTAAHLAE--------AVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        +T + ++ V ++    AA  AE         VTC   +L PC+ AIT    P  ACC+KL EQQ C CG+ KNP+   Y+ SP A+ V+  C V +P C
Subjt:  ITRLCLLVVTMAALLTAAHLAE--------AVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.0e-2148.96Show/hide
Query:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        M  +  T + L  +    L+  A  AEAVTCS M+LSPC  AITS++PP A CC+KL+EQ+PC CGY++NPSL  +V +P A+ V   C +P P+C
Subjt:  MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.7e-1442.65Show/hide
Query:  VTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        VTC   +LS C+ A+++ APP   CC KL+E + C C Y++NP    YV SP A+  ++ C V +P C
Subjt:  VTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.2e-1648.53Show/hide
Query:  VTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC
        VTC  ++LS C   + +  PP   CC KL+EQQPCFC Y+K+P    YV S  AK  ++ CGVP+P C
Subjt:  VTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGCTTCCGATCACAAGGCTTTGCCTATTGGTGGTGACAATGGCCGCGCTCCTAACTGCAGCTCATCTTGCCGAGGCGGTGACTTGCAGCACTATGGAGCTTAG
TCCATGCATGGGTGCAATAACGTCGACCGCACCACCGCCGGCCGCTTGTTGCAGTAAGCTGAGGGAGCAACAACCGTGCTTTTGTGGGTACCTCAAGAATCCAAGCTTGG
GAGGTTACGTGCAATCTCCTCGTGCCAAAACTGTTATTTCCAAATGTGGTGTTCCCTTCCCCAAATGCTAG
mRNA sequenceShow/hide mRNA sequence
TAATTAATAAAAGAGATGGTCATTCTCTACTCACATTCCACTTTATGAGACTATAAAAAGTGGTCTGGAAGGTGTGCCAAAATACTAACTCATTCCTCTTTCTATACCTT
AGCTTGCTCTCATTACCAAAAAGAAATGAAAAAGCTTCCGATCACAAGGCTTTGCCTATTGGTGGTGACAATGGCCGCGCTCCTAACTGCAGCTCATCTTGCCGAGGCGG
TGACTTGCAGCACTATGGAGCTTAGTCCATGCATGGGTGCAATAACGTCGACCGCACCACCGCCGGCCGCTTGTTGCAGTAAGCTGAGGGAGCAACAACCGTGCTTTTGT
GGGTACCTCAAGAATCCAAGCTTGGGAGGTTACGTGCAATCTCCTCGTGCCAAAACTGTTATTTCCAAATGTGGTGTTCCCTTCCCCAAATGCTAGAGGCCCATGCTTTC
GTATGGGCTTGTCTTATATATATATATATAGCCTCTACTACAATATATCAAACTATATGAATAAAAAGGAAAATTATCTGATGTTTAATTTTCTTTGCCTATGCTTCAAT
TTTTTATCTTTATATAAATATGGAATAAGATTGTTATAAAGGAATATGAAGTATCTAGACAACTGTTGAAAGAAGTGGATCTATTTTCATCTTGATTCTATATAGTATAT
TACTATATGTATATTTGGGGAAGCTTTATTTTGTTACTCATATGTTTGCCTCTTGTTTGTTAATTTTAAATATTTCACTTTAATAA
Protein sequenceShow/hide protein sequence
MKKLPITRLCLLVVTMAALLTAAHLAEAVTCSTMELSPCMGAITSTAPPPAACCSKLREQQPCFCGYLKNPSLGGYVQSPRAKTVISKCGVPFPKC