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Clc07G16220 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G16220
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionnon-specific lipid-transfer protein 2P-like
Genome locationClcChr07:30691582..30692651
RNA-Seq ExpressionClc07G16220
SyntenyClc07G16220
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648021.1 hypothetical protein Csa_005848 [Cucumis sativus]7.2e-2463.64Show/hide
Query:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADC
        I  VVCIFVVATTV LLNGA P  AQ  CDP+QL +SC  AFF  T  P+  CCNKLRE QPCYC Y+ +P L+  V+S+AARRIAK+C I  PT+ADC
Subjt:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADC

KAE8649342.1 hypothetical protein Csa_014385 [Cucumis sativus]7.2e-2463.64Show/hide
Query:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADC
        I  VVCIFVVATTV LLNGA P  AQ  CDP+QL +SC  AFF  T  P+  CCNKLRE QPCYC Y+ +P L+  V+S+AARRIAK+C I  PT+ADC
Subjt:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADC

KAG6581747.1 hypothetical protein SDJN03_21749, partial [Cucurbita argyrosperma subsp. sororia]5.2e-2262.63Show/hide
Query:  VRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCP
        + VVC FVVA     L GA    AQ TCDP  L   CG AF  S  +P+TRCCNKLREQQPCYCAYL NP LK  VDS AARRIA+ C I  PTQA+CP
Subjt:  VRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCP

KAG7026200.1 hypothetical protein SDJN02_12699, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2161.62Show/hide
Query:  VRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCP
        + VVC F+VA     L GA    AQ TCDP  L   CG AF  S  +P+TRCCNKLREQQPCYCAYL NP LK  VDS AARRIA+ C I  PTQA+CP
Subjt:  VRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCP

XP_008444079.1 PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo]8.0e-2361.39Show/hide
Query:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCP
        I  VVCIFVVATTV LLNG  P AAQT CD +QL +SC PAF      P   CC KLR +QPCYC Y  +P L+  V+S AARR+A+AC I FPT ADCP
Subjt:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCP

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A061EP56 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative2.1e-1345.92Show/hide
Query:  EMLAIVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP
        E + +V VV + VVA  VVLL+G         C P++L TSC PA  +S++ P+T CC+KLREQ+PC C YL+NP LK  V++  AR++A  C + +P
Subjt:  EMLAIVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP

A0A0A0KZL4 Putative lipid transfer protein family protein3.5e-2463.64Show/hide
Query:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADC
        I  VVCIFVVATTV LLNGA P  AQ  CDP+QL +SC  AFF  T  P+  CCNKLRE QPCYC Y+ +P L+  V+S+AARRIAK+C I  PT+ADC
Subjt:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADC

A0A1S3BAC3 non-specific lipid-transfer protein 2P-like3.9e-2361.39Show/hide
Query:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCP
        I  VVCIFVVATTV LLNG  P AAQT CD +QL +SC PAF      P   CC KLR +QPCYC Y  +P L+  V+S AARR+A+AC I FPT ADCP
Subjt:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCP

Query:  N
        N
Subjt:  N

A0A5A7V7R4 Non-specific lipid-transfer protein 2P-like3.9e-2361.39Show/hide
Query:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCP
        I  VVCIFVVATTV LLNG  P AAQT CD +QL +SC PAF      P   CC KLR +QPCYC Y  +P L+  V+S AARR+A+AC I FPT ADCP
Subjt:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCP

Query:  N
        N
Subjt:  N

A0A6A2X1V6 Non-specific lipid-transfer protein 23.6e-1346.88Show/hide
Query:  LAIVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP
        + +V  V + VVA  VV L+G   +A   TCDP QL  +C PAF S  T PT  CC KL++QQPC+C Y++NP LK  V+S  A+++A  C + FP
Subjt:  LAIVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 24.6e-0531.18Show/hide
Query:  RVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPT
        R+  + +    V    G     A  +C+  QL T C  A  +   +PT  CC+ LR QQ C+C + ++P+    V+S  AR+   +C I  PT
Subjt:  RVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPT

P20145 Probable non-specific lipid-transfer protein1.2e-0534.38Show/hide
Query:  LAIVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP
        +A+ +   + V+   VV L     A A   C+PAQL   C  A     T+P+  CC  LR QQ C C Y+++P     V S  AR     C I  P
Subjt:  LAIVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP

P82353 Non-specific lipid-transfer protein 23.6e-1049.25Show/hide
Query:  TCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP
        TC P QL    GP   S    PTT CC KLREQ+PC C YL+NP L+  V+S  AR++A  C +  P
Subjt:  TCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP

P86809 Non-specific lipid-transfer protein 23.4e-0843.75Show/hide
Query:  TCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKI
        TC   QL      A  +  T P+  CCNKL+EQ+PC C YL++P LK  V+S  AR+ A +C +
Subjt:  TCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKI

Q43681 Probable non-specific lipid-transfer protein AKCS93.6e-1038.46Show/hide
Query:  VVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP
        VVC  VV    ++  G  P A   TC+P +L +SC PA  +  ++P++ CC+KL+ Q+PC C Y++NP LK  V+S  A+++   C + +P
Subjt:  VVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP

Arabidopsis top hitse value%identityAlignment
AT1G43667.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.6e-0850Show/hide
Query:  TQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP
        +QP+T+CC KL+EQ  C+C YL+NPQ    +   AA++I  ACKI +P
Subjt:  TQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP

AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.5e-1443.16Show/hide
Query:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPT
        +V+V+ + V+A    +L    P A   TC P QL  SC  A  +S++ P+  CC KLREQQPC C Y+RNP L+  V S  AR+++ +CKI  P+
Subjt:  IVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPT

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.6e-1338.54Show/hide
Query:  LAIVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP
        + +++   + + A   VLL    PAA   TC P QL + C  A  +S++ P+  CC KL+EQ+PC C Y+RNP L+  V +  AR+++K+CK+  P
Subjt:  LAIVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFP

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.6e-0842.65Show/hide
Query:  TCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPT
        TCD  QL +SC  A  S+   P+T CC KL+E + C C Y++NP     V S  AR+   AC + +PT
Subjt:  TCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPT

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.7e-1036.19Show/hide
Query:  FDEMLAIVRVVCIFV----VATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACK
        F  ++ IV VV + V    +  T V L+G     A  TCD  QL +   P    +   P+T CC KL+EQQPC+C Y+++P+    V SA A++    C 
Subjt:  FDEMLAIVRVVCIFV----VATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKLREQQPCYCAYLRNPQLKPLVDSAAARRIAKACK

Query:  IQFPT
        + +PT
Subjt:  IQFPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTCAAGCTCGAATTAACTTTGGACTCTCGTCTGTGGCGTTTCAAGCCCTCAAACTCCATACCTATATCGCTCTGCTCCTGGTTTTCCTCTTCTTTACCAACAA
TTCCTTCGCCTCCTTCATTCATACGCAAGACTTCGACGAAATGCTCGCCATTGTTAGAGTTGTTTGCATTTTCGTGGTGGCGACCACAGTGGTGCTCCTCAACGGCGCTT
GTCCCGCGGCTGCACAGACAACATGCGACCCTGCGCAGCTGGGAACCTCATGCGGACCAGCATTCTTCTCCTCGACCACGCAGCCGACCACCCGATGTTGCAATAAGTTG
AGGGAGCAACAACCATGCTACTGTGCTTATCTCCGCAATCCACAATTGAAGCCTTTGGTGGATTCTGCTGCCGCCAGAAGGATTGCTAAAGCCTGCAAAATTCAGTTCCC
AACTCAGGCTGACTGCCCTAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTCAAGCTCGAATTAACTTTGGACTCTCGTCTGTGGCGTTTCAAGCCCTCAAACTCCATACCTATATCGCTCTGCTCCTGGTTTTCCTCTTCTTTACCAACAA
TTCCTTCGCCTCCTTCATTCATACGCAAGACTTCGACGAAATGCTCGCCATTGTTAGAGTTGTTTGCATTTTCGTGGTGGCGACCACAGTGGTGCTCCTCAACGGCGCTT
GTCCCGCGGCTGCACAGACAACATGCGACCCTGCGCAGCTGGGAACCTCATGCGGACCAGCATTCTTCTCCTCGACCACGCAGCCGACCACCCGATGTTGCAATAAGTTG
AGGGAGCAACAACCATGCTACTGTGCTTATCTCCGCAATCCACAATTGAAGCCTTTGGTGGATTCTGCTGCCGCCAGAAGGATTGCTAAAGCCTGCAAAATTCAGTTCCC
AACTCAGGCTGACTGCCCTAACTAG
Protein sequenceShow/hide protein sequence
MGFQARINFGLSSVAFQALKLHTYIALLLVFLFFTNNSFASFIHTQDFDEMLAIVRVVCIFVVATTVVLLNGACPAAAQTTCDPAQLGTSCGPAFFSSTTQPTTRCCNKL
REQQPCYCAYLRNPQLKPLVDSAAARRIAKACKIQFPTQADCPN