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Clc07G16250 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G16250
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNon-specific lipid-transfer protein 2-like
Genome locationClcChr07:30709318..30710345
RNA-Seq ExpressionClc07G16250
SyntenyClc07G16250
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064150.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]1.9e-2474.03Show/hide
Query:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLP
        MALL+GA   +AV+C P EL+PC++AI+SSSV PSS CC+KMEEQAPCLCQYAKIP +KP I+GGQRVAAVCGV LP
Subjt:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLP

KAE8648023.1 hypothetical protein Csa_005844, partial [Cucumis sativus]3.2e-1977.05Show/hide
Query:  PSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLP
        PS   PC++AI+SSSV+PSS CC+KMEEQAPCLCQYAKIP +KP I+GGQRVAAVCGV LP
Subjt:  PSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLP

KAG6581743.1 hypothetical protein SDJN03_21745, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2066.67Show/hide
Query:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLPE
        MALL GA +ADAVDC+PSELSPCL AI +SS  P+S+CC KM EQ PCLC Y K PE+KP+++GG+RVAA CG+ +PE
Subjt:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLPE

XP_022955891.1 non-specific lipid-transfer protein 2-like [Cucurbita moschata]2.2e-2066.67Show/hide
Query:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLPE
        MALL GA +ADAVDC+PSELSPCL AI +SS  P+S+CC KM EQ PCLC Y K PE+KP+++GG+RVAA CG+ +PE
Subjt:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLPE

XP_023527040.1 non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]2.2e-2066.67Show/hide
Query:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLPE
        MALL GA +ADAVDC+PSELSPCL AI +SS  P+S+CC KM EQ PCLC Y K PE+KP+++GG+RVAA CG+ +PE
Subjt:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLPE

TrEMBL top hitse value%identityAlignment
A0A0A0L0Z5 Uncharacterized protein2.9e-2676.62Show/hide
Query:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLP
        MALL GAR  DAV+C P EL+PC++AI+SSSV+PSS CC+KMEEQAPCLCQYAKIP +KP I+GGQRVAAVCGV LP
Subjt:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLP

A0A540MBG3 AAI domain-containing protein9.6e-1452.5Show/hide
Query:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLPE
        +AL    +  +AV CSP ELSPCLEAIRS +  PS+TCC K++EQ PCLC+Y K P +KP+I+    ++VAA CG+  P+
Subjt:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLPE

A0A5A7VA95 Non-specific lipid-transfer protein 2-like9.3e-2574.03Show/hide
Query:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLP
        MALL+GA   +AV+C P EL+PC++AI+SSSV PSS CC+KMEEQAPCLCQYAKIP +KP I+GGQRVAAVCGV LP
Subjt:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLP

A0A6J1GTR0 non-specific lipid-transfer protein 2-like4.3e-1456.96Show/hide
Query:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLP
        +ALL+GAR+A+AV+CSP ELS C  AI SSS  PSSTCC K+ EQ PCLC Y + P  +P++   G ++VAA CGV  P
Subjt:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLP

A0A6J1GV37 non-specific lipid-transfer protein 2-like1.1e-2066.67Show/hide
Query:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLPE
        MALL GA +ADAVDC+PSELSPCL AI +SS  P+S+CC KM EQ PCLC Y K PE+KP+++GG+RVAA CG+ +PE
Subjt:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLPE

SwissProt top hitse value%identityAlignment
P20145 Probable non-specific lipid-transfer protein3.5e-0532.91Show/hide
Query:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISG--GQRVAAVCGVNLP
        + L AGA       C P++L+ C  AI   +  PS  CC  +  Q  CLCQY K P +  ++S    +    +CG+ +P
Subjt:  MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISG--GQRVAAVCGVNLP

P82353 Non-specific lipid-transfer protein 21.8e-0944.12Show/hide
Query:  VDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLPE
        V CSP +LSPCL  I S +  P +TCC K+ EQ PCLC Y K P  + +++    +++A+ CGV +P+
Subjt:  VDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLPE

P82901 Non-specific lipid-transfer protein 2P3.0e-0436.92Show/hide
Query:  CSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISG--GQRVAAVCGVNLP
        C  S+L+ C  AI S +  PS  CC  +  Q PC CQYAK P +  +I     +     CG+ +P
Subjt:  CSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISG--GQRVAAVCGVNLP

P86809 Non-specific lipid-transfer protein 21.5e-0846.88Show/hide
Query:  CSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNL
        CS  +LSPCL AI + +  PS+ CC K++EQ PCLC Y K P  K +++  G ++ A+ CGV L
Subjt:  CSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNL

Q43681 Probable non-specific lipid-transfer protein AKCS93.3e-1147.89Show/hide
Query:  LADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLP
        +A+AV C+P+ELS C+ AI   S  PSSTCC K++ Q PCLC Y K P  K +++  G ++V + CGV  P
Subjt:  LADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLP

Arabidopsis top hitse value%identityAlignment
AT1G43667.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.5e-0835.38Show/hide
Query:  VDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLP
        V C+ +EL PCL ++   S  PS+ CC K++EQ  C C Y + P++  +I+  +++ A C +  P
Subjt:  VDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLP

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.0e-0740.3Show/hide
Query:  VDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLP
        V C   +L PCL AI      PS  CC K+ EQ  CLC +AK P +  +IS    ++V   C V  P
Subjt:  VDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLP

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.0e-0948.21Show/hide
Query:  RLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS
        R+A    C+P++LSPCLE I   S  PS  CC K++EQ  C+CQY K P +K F++
Subjt:  RLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.5e-1145.45Show/hide
Query:  LLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLP
        L+  A  A+AV CSP +LSPC  AI SSS  PS+ CC K++EQ PCLC Y + P  + F+S    ++V+  C + +P
Subjt:  LLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFIS--GGQRVAAVCGVNLP

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.9e-0635.82Show/hide
Query:  VDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFI--SGGQRVAAVCGVNLP
        V C   +LS C   +  + V PS+ CC K++EQ PC C Y K P +  ++  +  ++  A CGV  P
Subjt:  VDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFI--SGGQRVAAVCGVNLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTTCTGGCTGGAGCTCGTTTGGCGGATGCGGTGGACTGCAGCCCTTCGGAACTGAGCCCATGTCTGGAGGCAATAAGGTCGTCGTCGGTGATGCCGTCGAGCAC
TTGCTGCGTCAAGATGGAAGAGCAGGCGCCGTGCCTCTGCCAATACGCTAAGATTCCAGAGTGGAAGCCTTTCATTTCCGGCGGGCAACGGGTTGCCGCTGTTTGCGGTG
TCAACCTTCCTGAGTTAATGGAGAAGTGCTTGGTGATCTCAAATTCTGAGAGTCTTGTTGCCAACCAGCTGGTTCTTCCCTTTTGGCAGCAAAATTCTCTTCTATATTTT
CATCATGAACGGAAACACTTTTGTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTTCTGGCTGGAGCTCGTTTGGCGGATGCGGTGGACTGCAGCCCTTCGGAACTGAGCCCATGTCTGGAGGCAATAAGGTCGTCGTCGGTGATGCCGTCGAGCAC
TTGCTGCGTCAAGATGGAAGAGCAGGCGCCGTGCCTCTGCCAATACGCTAAGATTCCAGAGTGGAAGCCTTTCATTTCCGGCGGGCAACGGGTTGCCGCTGTTTGCGGTG
TCAACCTTCCTGAGTTAATGGAGAAGTGCTTGGTGATCTCAAATTCTGAGAGTCTTGTTGCCAACCAGCTGGTTCTTCCCTTTTGGCAGCAAAATTCTCTTCTATATTTT
CATCATGAACGGAAACACTTTTGTCGTTGA
Protein sequenceShow/hide protein sequence
MALLAGARLADAVDCSPSELSPCLEAIRSSSVMPSSTCCVKMEEQAPCLCQYAKIPEWKPFISGGQRVAAVCGVNLPELMEKCLVISNSESLVANQLVLPFWQQNSLLYF
HHERKHFCR