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Clc07G16570 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G16570
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-actin-capping protein subunit alpha
Genome locationClcChr07:31112340..31117309
RNA-Seq ExpressionClc07G16570
SyntenyClc07G16570
Gene Ontology termsGO:0051016 - barbed-end actin filament capping (biological process)
GO:0008290 - F-actin capping protein complex (cellular component)
GO:0003779 - actin binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFC40251.1 hypothetical protein TanjilG_32901 [Tanacetum cinerariifolium]5.3e-1181.4Show/hide
Query:  PVFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESRFDA
        PVFSP  VGGE+W+SSSFSGGVF+EKK SPNEWQI MESR DA
Subjt:  PVFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESRFDA

KAE8649130.1 hypothetical protein Csa_014869 [Cucumis sativus]4.3e-1373.91Show/hide
Query:  MASNKNSMGFKVLFVVMLILTSSQYVAFGR-HIADATPH-RSYHKNHREKE-NISRVQHRSQTDVPRRG
        MASNK+SM FK LFVV+LI+TSSQYVAFGR HI+DA PH RS HK+ REKE  ISRV+H SQTD PR+G
Subjt:  MASNKNSMGFKVLFVVMLILTSSQYVAFGR-HIADATPH-RSYHKNHREKE-NISRVQHRSQTDVPRRG

OIW13576.1 hypothetical protein TanjilG_29317 [Lupinus angustifolius]3.4e-1087.18Show/hide
Query:  VFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESR
        VFSP RVGGEDW+SSSFSGGVFIEK+ SPNEWQI MESR
Subjt:  VFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESR

RDY08745.1 hypothetical protein CR513_06995, partial [Mucuna pruriens]1.1e-1189.74Show/hide
Query:  VFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESR
        VFSP RVGGEDW+SSSFSGGVFIEK+ SPNEWQIWMESR
Subjt:  VFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESR

RXI05906.1 hypothetical protein DVH24_017948 [Malus domestica]2.4e-1179.55Show/hide
Query:  PVFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESRFDAG
        P+FSP RVGGEDW+SSSF+GGV IEKK SPN+WQI M SRFDAG
Subjt:  PVFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESRFDAG

TrEMBL top hitse value%identityAlignment
A0A0A0KUB2 Uncharacterized protein2.1e-1373.91Show/hide
Query:  MASNKNSMGFKVLFVVMLILTSSQYVAFGR-HIADATPH-RSYHKNHREKE-NISRVQHRSQTDVPRRG
        MASNK+SM FK LFVV+LI+TSSQYVAFGR HI+DA PH RS HK+ REKE  ISRV+H SQTD PR+G
Subjt:  MASNKNSMGFKVLFVVMLILTSSQYVAFGR-HIADATPH-RSYHKNHREKE-NISRVQHRSQTDVPRRG

A0A1J7HLA6 F-actin-capping protein subunit alpha1.7e-1087.18Show/hide
Query:  VFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESR
        VFSP RVGGEDW+SSSFSGGVFIEK+ SPNEWQI MESR
Subjt:  VFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESR

A0A371I128 Uncharacterized protein (Fragment)5.2e-1289.74Show/hide
Query:  VFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESR
        VFSP RVGGEDW+SSSFSGGVFIEK+ SPNEWQIWMESR
Subjt:  VFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESR

A0A498KET4 Uncharacterized protein1.2e-1179.55Show/hide
Query:  PVFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESRFDAG
        P+FSP RVGGEDW+SSSF+GGV IEKK SPN+WQI M SRFDAG
Subjt:  PVFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESRFDAG

A0A699PL36 Uncharacterized protein (Fragment)2.6e-1181.4Show/hide
Query:  PVFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESRFDA
        PVFSP  VGGE+W+SSSFSGGVF+EKK SPNEWQI MESR DA
Subjt:  PVFSPSRVGGEDWKSSSFSGGVFIEKKVSPNEWQIWMESRFDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAAACAAGAACTCAATGGGTTTTAAGGTTTTATTTGTTGTTATGCTCATTCTTACTTCTTCCCAATATGTGGCGTTTGGAAGACATATTGCTGATGCTACTCC
TCATCGATCTTATCATAAAAATCATAGGGAAAAGGAGAATATTTCAAGAGTTCAACATCGTTCCCAAACTGACGTCCCAAGGAGGGGCATATCATCAAAGAAAGTAGAGG
AAAGTCAAACCTTTCCATCAAATTATGTGAAAAAAACCCCGATTTTCTCAAAGATTAGAGATGGAACTGGCAGGCCAAGTCGTTACCCTGTGTTCTCTCCAAGTCGGGTC
GGAGGCGAAGACTGGAAAAGTTCATCATTCAGTGGTGGGGTGTTCATAGAAAAGAAGGTGTCGCCAAACGAGTGGCAGATTTGGATGGAGTCTCGCTTTGATGCTGGGGT
GAGGAGACACAAATGTATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAAACAAGAACTCAATGGGTTTTAAGGTTTTATTTGTTGTTATGCTCATTCTTACTTCTTCCCAATATGTGGCGTTTGGAAGACATATTGCTGATGCTACTCC
TCATCGATCTTATCATAAAAATCATAGGGAAAAGGAGAATATTTCAAGAGTTCAACATCGTTCCCAAACTGACGTCCCAAGGAGGGGCATATCATCAAAGAAAGTAGAGG
AAAGTCAAACCTTTCCATCAAATTATGTGAAAAAAACCCCGATTTTCTCAAAGATTAGAGATGGAACTGGCAGGCCAAGTCGTTACCCTGTGTTCTCTCCAAGTCGGGTC
GGAGGCGAAGACTGGAAAAGTTCATCATTCAGTGGTGGGGTGTTCATAGAAAAGAAGGTGTCGCCAAACGAGTGGCAGATTTGGATGGAGTCTCGCTTTGATGCTGGGGT
GAGGAGACACAAATGTATATAG
Protein sequenceShow/hide protein sequence
MASNKNSMGFKVLFVVMLILTSSQYVAFGRHIADATPHRSYHKNHREKENISRVQHRSQTDVPRRGISSKKVEESQTFPSNYVKKTPIFSKIRDGTGRPSRYPVFSPSRV
GGEDWKSSSFSGGVFIEKKVSPNEWQIWMESRFDAGVRRHKCI