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Clc07G16580 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G16580
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:31118064..31122199
RNA-Seq ExpressionClc07G16580
SyntenyClc07G16580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1664.2Show/hide
Query:  MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTPLEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR
        M S  VS+ W  VFFI MLLM+S    NV +RK LD N P+EDGFN+ +IGASSFFY+LEGELEKRFE F+K+ T ND+PR
Subjt:  MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTPLEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR

KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]1.8e-2376.54Show/hide
Query:  MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTPLEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR
        M SKRVSMI  +VFFI+MLL+SSNNNYNV ARKFLDVNTPL+D FNL Q+ ASS FYK++GEL++RFED LKATT NDIPR
Subjt:  MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTPLEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR

KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]4.1e-2071.95Show/hide
Query:  MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTP-LEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR
        M S RVSMI  ++FFI+ML +SSNNNYN  ARKFLDVN P L+D F+L Q+GASS FYKLEGEL+KRFED LK TT NDIPR
Subjt:  MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTP-LEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR

XP_031739611.1 uncharacterized protein LOC116403190 isoform X2 [Cucumis sativus]2.7e-1174Show/hide
Query:  RKFLDVNTPLEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR
        +KFLDVNTPL+D FNL Q+ ASS FYK++GEL++RFED LKATT NDIPR
Subjt:  RKFLDVNTPLEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR

TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein2.0e-2071.95Show/hide
Query:  MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTP-LEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR
        M S RVSMI  ++FFI+ML +SSNNNYN  ARKFLDVN P L+D F+L Q+GASS FYKLEGEL+KRFED LK TT NDIPR
Subjt:  MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTP-LEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR

A0A0A0KW84 Uncharacterized protein8.6e-2476.54Show/hide
Query:  MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTPLEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR
        M SKRVSMI  +VFFI+MLL+SSNNNYNV ARKFLDVNTPL+D FNL Q+ ASS FYK++GEL++RFED LKATT NDIPR
Subjt:  MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTPLEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCCAAGAGAGTTTCAATGATTTGGTGTATGGTGTTCTTCATTCTCATGCTTTTAATGTCCTCTAATAATAATTATAATGTTTTTGCAAGGAAATTTCTTGATGT
TAATACCCCTCTTGAGGATGGCTTCAACCTTGATCAAATTGGTGCATCTTCATTTTTCTATAAATTGGAAGGGGAGTTAGAAAAGAGATTCGAGGATTTCTTAAAAGCAA
CCACTAGTAACGATATTCCTCGAGCGCCGTGGCATGGCCGTCTAAGCGCTGCGACGCTGTCATGCGTTCAACAAGGATGCGTCGAGGCAGCGCCATCTCGGCGCCGCGAT
GCTACTATGCGTCCAGAACGATGCGTTCATGTTTCAGCGCTGTGGCAGCTCCGTCCAAGCGCCGCTATGCTACTATGTGTCCAGAATGATGCGTTTATGTTTCAGCGCCG
TCTCGGCGCTATCCCAAAATTCGCCCTTTTGAGTTTTTCAGCTCTTTTTCGCCGTATTCTTGCTCTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCCAAGAGAGTTTCAATGATTTGGTGTATGGTGTTCTTCATTCTCATGCTTTTAATGTCCTCTAATAATAATTATAATGTTTTTGCAAGGAAATTTCTTGATGT
TAATACCCCTCTTGAGGATGGCTTCAACCTTGATCAAATTGGTGCATCTTCATTTTTCTATAAATTGGAAGGGGAGTTAGAAAAGAGATTCGAGGATTTCTTAAAAGCAA
CCACTAGTAACGATATTCCTCGAGCGCCGTGGCATGGCCGTCTAAGCGCTGCGACGCTGTCATGCGTTCAACAAGGATGCGTCGAGGCAGCGCCATCTCGGCGCCGCGAT
GCTACTATGCGTCCAGAACGATGCGTTCATGTTTCAGCGCTGTGGCAGCTCCGTCCAAGCGCCGCTATGCTACTATGTGTCCAGAATGATGCGTTTATGTTTCAGCGCCG
TCTCGGCGCTATCCCAAAATTCGCCCTTTTGAGTTTTTCAGCTCTTTTTCGCCGTATTCTTGCTCTGTTTTGA
Protein sequenceShow/hide protein sequence
MVSKRVSMIWCMVFFILMLLMSSNNNYNVFARKFLDVNTPLEDGFNLDQIGASSFFYKLEGELEKRFEDFLKATTSNDIPRAPWHGRLSAATLSCVQQGCVEAAPSRRRD
ATMRPERCVHVSALWQLRPSAAMLLCVQNDAFMFQRRLGAIPKFALLSFSALFRRILALF