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Clc07G16590 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G16590
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:31124400..31125262
RNA-Seq ExpressionClc07G16590
SyntenyClc07G16590
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]6.8e-1560.71Show/hide
Query:  MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFLDAS-------NLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY
        MAS  VSV W  VFFI MLLMAS    NVS+RK LDA+       N+++GAS   YELEGE+EKRF+ F+KSH  ND PRGGNY
Subjt:  MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFLDAS-------NLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY

KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]3.0e-1864.29Show/hide
Query:  MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFL-------DASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY
        MASKRVS+I +VVFFI+MLL++SNNNYNVSARKFL       DA NLQM AS L Y+++GE+++RF+D LK+   ND PRGGNY
Subjt:  MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFL-------DASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY

KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]5.6e-1762.35Show/hide
Query:  MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFL--------DASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY
        MAS RVS+I  V+FFI+ML ++SNNNYN SARKFL        DA +LQMGAS L Y+LEGE++KRF+D LK+   ND PRGGNY
Subjt:  MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFL--------DASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY

XP_031739611.1 uncharacterized protein LOC116403190 isoform X2 [Cucumis sativus]8.3e-0559.52Show/hide
Query:  DASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY
        DA NLQM AS L Y+++GE+++RF+D LK+   ND PRGGNY
Subjt:  DASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY

TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein2.7e-1762.35Show/hide
Query:  MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFL--------DASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY
        MAS RVS+I  V+FFI+ML ++SNNNYN SARKFL        DA +LQMGAS L Y+LEGE++KRF+D LK+   ND PRGGNY
Subjt:  MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFL--------DASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY

A0A0A0KW84 Uncharacterized protein1.4e-1864.29Show/hide
Query:  MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFL-------DASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY
        MASKRVS+I +VVFFI+MLL++SNNNYNVSARKFL       DA NLQM AS L Y+++GE+++RF+D LK+   ND PRGGNY
Subjt:  MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFL-------DASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGAGAGTTTCAGTGATTTGGAGTGTGGTATTTTTCATTCTTATGCTTTTAATGGCCTCTAATAATAATTATAATGTTTCTGCAAGAAAATTTCTT
GATGCCTCGAACCTTCAAATGGGTGCATCTTTATTATTATATGAATTGGAGGGAGAAATGGAAAAGAGATTCGATGATTTCTTAAAGTCACACATTAGTAATGAT
GATCCTAGAGGTGGAAATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAGAGAGTTTCAGTGATTTGGAGTGTGGTATTTTTCATTCTTATGCTTTTAATGGCCTCTAATAATAATTATAATGTTTCTGCAAGAAAATTTCTT
GATGCCTCGAACCTTCAAATGGGTGCATCTTTATTATTATATGAATTGGAGGGAGAAATGGAAAAGAGATTCGATGATTTCTTAAAGTCACACATTAGTAATGAT
GATCCTAGAGGTGGAAATTATTGA
Protein sequenceShow/hide protein sequence
MASKRVSVIWSVVFFILMLLMASNNNYNVSARKFLDASNLQMGASLLLYELEGEMEKRFDDFLKSHISNDDPRGGNY