; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G16990 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G16990
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionglycine-rich cell wall structural protein 2
Genome locationClcChr07:31503276..31504030
RNA-Seq ExpressionClc07G16990
SyntenyClc07G16990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146895.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]6.1e-6689.16Show/hide
Query:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGG----GNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYG
        MK PS FHL+SLFFLLFV+T+SSTVS GAT RKLLNFPDMSWGSP+GGG    GNPTG YGS HGPNWDYNWGWGS+PGSGWG+GSGSGRSPTGFGKGYG
Subjt:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGG----GNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG
        YGFGSGSGSGSGYGYGSGSGGAH GGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSP TTRDKNRQG
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG

XP_016901488.1 PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis melo]1.6e-6689.7Show/hide
Query:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGG---GNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGY
        MK PS FHL+SLFFLLFV+T+SSTVSG AT RKLLNFPDMSWGSPNGGG   GNPTG YGS H PNWDYNWGWGS+PGSGWG+GSGSGRSPTGFGKGYGY
Subjt:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGG---GNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG
        GFGSGSGSGSGYGYGSGSGGAH GGYGSGSGYGNSGGGG GGGYGGPSGDEYRSPTTTRDKNRQG
Subjt:  GFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG

XP_022922583.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]2.3e-5278.24Show/hide
Query:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFG
        MK PS FHL+ LFFLLF ITASS V G    RKLLN PDM WGSPN GGGNPTGGYGSAHGPNWDYNWGWGS+PGSGWGYGSGSGRSPTGFGKGYGYGFG
Subjt:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFG

Query:  SGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPTTTRDKNRQG
        SGSGSGSGYGYGSG GGAH GGYGSGSGYGNSG        GG SGGGYG  SG EY     T+DK+R G
Subjt:  SGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPTTTRDKNRQG

XP_023553046.1 keratin-associated protein 21-1-like [Cucurbita pepo subsp. pepo]4.3e-5178.24Show/hide
Query:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFG
        MK PS FHL+ LFFLLF ITASS V G    RKLLN PDM WGSPN GGGNPTGGYGSAHGPNWDYNWGWGS+PGSGWGYGSGSGRSPTGFGKGYGYGFG
Subjt:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFG

Query:  SGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNS-----GGG---GSGGGYGGPSGDEYRSPTTTRDKNRQG
        SGSGSGSGYGYGSG GGAH GGYGSGSGYGNS     GGG    SGGGYG  SG EY     T+DK+R G
Subjt:  SGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNS-----GGG---GSGGGYGGPSGDEYRSPTTTRDKNRQG

XP_038899364.1 glycine-rich cell wall structural protein 2-like [Benincasa hispida]7.5e-6489.57Show/hide
Query:  MKIPSTFHLTSLFFLLFVITA-SSTVSGGATARKLLNFPDMSWGSPN--GGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGY
        MK PSTFHL SLFFLLFV+TA SSTVSG ATARKLLNFPDMSWGSPN  GGGGNPTG YGSAHGPNWDYNWGWGS+PGSGWGYGSGSGRSPTGFGKGYGY
Subjt:  MKIPSTFHLTSLFFLLFVITA-SSTVSGGATARKLLNFPDMSWGSPN--GGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNR
        G+G GSGSGSG+GYGSGSGGAH GGYGSGSGYGNSGG GSGGGYGGP+G+EYRSPTTT+DKNR
Subjt:  GFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNR

TrEMBL top hitse value%identityAlignment
A0A0A0KXP2 Uncharacterized protein3.0e-6689.16Show/hide
Query:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGG----GNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYG
        MK PS FHL+SLFFLLFV+T+SSTVS GAT RKLLNFPDMSWGSP+GGG    GNPTG YGS HGPNWDYNWGWGS+PGSGWG+GSGSGRSPTGFGKGYG
Subjt:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGG----GNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG
        YGFGSGSGSGSGYGYGSGSGGAH GGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSP TTRDKNRQG
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG

A0A1S4DZT0 glycine-rich cell wall structural protein 27.8e-6789.7Show/hide
Query:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGG---GNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGY
        MK PS FHL+SLFFLLFV+T+SSTVSG AT RKLLNFPDMSWGSPNGGG   GNPTG YGS H PNWDYNWGWGS+PGSGWG+GSGSGRSPTGFGKGYGY
Subjt:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGG---GNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG
        GFGSGSGSGSGYGYGSGSGGAH GGYGSGSGYGNSGGGG GGGYGGPSGDEYRSPTTTRDKNRQG
Subjt:  GFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG

A0A5A7TRC6 Glycine-rich cell wall structural protein 27.8e-6789.7Show/hide
Query:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGG---GNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGY
        MK PS FHL+SLFFLLFV+T+SSTVSG AT RKLLNFPDMSWGSPNGGG   GNPTG YGS H PNWDYNWGWGS+PGSGWG+GSGSGRSPTGFGKGYGY
Subjt:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGG---GNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG
        GFGSGSGSGSGYGYGSGSGGAH GGYGSGSGYGNSGGGG GGGYGGPSGDEYRSPTTTRDKNRQG
Subjt:  GFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG

A0A6J1E737 glycine-rich cell wall structural protein 2-like1.1e-5278.24Show/hide
Query:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFG
        MK PS FHL+ LFFLLF ITASS V G    RKLLN PDM WGSPN GGGNPTGGYGSAHGPNWDYNWGWGS+PGSGWGYGSGSGRSPTGFGKGYGYGFG
Subjt:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFG

Query:  SGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPTTTRDKNRQG
        SGSGSGSGYGYGSG GGAH GGYGSGSGYGNSG        GG SGGGYG  SG EY     T+DK+R G
Subjt:  SGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPTTTRDKNRQG

A0A6J1J236 glycine-rich cell wall structural protein 2-like2.7e-5177.06Show/hide
Query:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFG
        MK PS FHL+ LFFLLF IT SS V G    RKLLN PDM WGSPN GGGNPTGGYGSAHGPNWDYNWGWGS+PGSGWGYGSGSGRS TGFGKGYGYGFG
Subjt:  MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFG

Query:  SGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPTTTRDKNRQG
        SGSGSGSGYGYGSG GGAH GGYGSGSGYGNSG        GG SGGGYG  SG EY     T+DK+R G
Subjt:  SGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPTTTRDKNRQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36120.1 Glycine-rich protein family4.2e-0446.15Show/hide
Query:  GSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYG
        G+  GGGG P GGYG   G      +G G   G G G G G+G    G G  +G G+G G G+G+G GYG G  G H GG G G+G G  GG G GG +G
Subjt:  GSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYG

Query:  GPSG
        G  G
Subjt:  GPSG

AT5G61660.1 glycine-rich protein1.2e-2459.85Show/hide
Query:  LFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGY
        L    F+ITA ++VS              +W       GN  G  GS  GPNW+YNWGWGS PGSGWGYG+GSGRSPTG+G+G GYG+GSGSGSG+GYGY
Subjt:  LFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGY

Query:  GSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGG
        GSG GGA  GGYG GSG G SGGGG GGG+ G
Subjt:  GSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATACCATCTACATTTCATCTAACATCTCTCTTCTTTCTTCTCTTTGTCATCACAGCTTCCTCCACCGTCAGCGGCGGCGCAACTGCCCGGAAACTGCTC
AACTTTCCTGACATGTCTTGGGGATCACCCAATGGAGGAGGTGGGAATCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGTTGG
GGTTCGAACCCAGGGAGCGGTTGGGGTTACGGTTCCGGTTCCGGCCGCTCCCCGACCGGATTCGGGAAAGGTTATGGATATGGATTTGGATCTGGATCAGGGTCC
GGGTCGGGATACGGGTATGGAAGTGGGAGTGGTGGTGCTCATGTTGGTGGATATGGGTCCGGAAGTGGCTACGGTAATTCTGGCGGTGGCGGTAGCGGTGGCGGA
TATGGTGGTCCGAGTGGTGACGAGTATCGGTCGCCAACCACTACAAGGGACAAAAACAGGCAAGGGTAG
mRNA sequenceShow/hide mRNA sequence
AAATAAAAAATAAATAAAAAAAAAAAACCATTAAAAAAATGAAAATACCATCTACATTTCATCTAACATCTCTCTTCTTTCTTCTCTTTGTCATCACAGCTTCCT
CCACCGTCAGCGGCGGCGCAACTGCCCGGAAACTGCTCAACTTTCCTGACATGTCTTGGGGATCACCCAATGGAGGAGGTGGGAATCCCACTGGGGGCTATGGCT
CTGCCCATGGTCCTAATTGGGACTATAATTGGGGTTGGGGTTCGAACCCAGGGAGCGGTTGGGGTTACGGTTCCGGTTCCGGCCGCTCCCCGACCGGATTCGGGA
AAGGTTATGGATATGGATTTGGATCTGGATCAGGGTCCGGGTCGGGATACGGGTATGGAAGTGGGAGTGGTGGTGCTCATGTTGGTGGATATGGGTCCGGAAGTG
GCTACGGTAATTCTGGCGGTGGCGGTAGCGGTGGCGGATATGGTGGTCCGAGTGGTGACGAGTATCGGTCGCCAACCACTACAAGGGACAAAAACAGGCAAGGGT
AGAAAAAATGTATGCGATGGATATATGTTATAAACTCTAGAGTTATATGCCGATAAAAATGTGAGAATATGGTTAGCCCTAGCTACCTCTAATTATAATATATAT
GGTTTGTAAGCTTGTTTAAAGTTTGCCCATATATGAGTCAGCCTTATAATCATAATCATATATTATAGTGTGTATTATATAGCTTTTTAATGAGACTAATATATA
TTTTCCATTTTTCATTTTTA
Protein sequenceShow/hide protein sequence
MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS
GSGYGYGSGSGGAHVGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPTTTRDKNRQG