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Clc08G00330 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G00330
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionOrigin recognition complex subunit 1
Genome locationClcChr08:406976..421111
RNA-Seq ExpressionClc08G00330
SyntenyClc08G00330
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0006325 - chromatin organization (biological process)
GO:0033314 - mitotic DNA replication checkpoint (biological process)
GO:0005664 - nuclear origin of replication recognition complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0003688 - DNA replication origin binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR020793 - Origin recognition complex, subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022925405.1 origin of replication complex subunit 1B-like isoform X1 [Cucurbita moschata]1.7e-4597.87Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESG+KHRLQKLQLNFP+DDVSFALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

XP_022925406.1 origin of replication complex subunit 1B-like isoform X2 [Cucurbita moschata]1.7e-4597.87Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESG+KHRLQKLQLNFP+DDVSFALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

XP_022973939.1 origin of replication complex subunit 1B-like isoform X1 [Cucurbita maxima]1.7e-4597.87Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESG+KHRLQKLQLNFP+DDVSFALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

XP_022973940.1 origin of replication complex subunit 1B-like isoform X2 [Cucurbita maxima]1.7e-4597.87Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESG+KHRLQKLQLNFP+DDVSFALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

XP_023535347.1 LOW QUALITY PROTEIN: origin of replication complex subunit 1B-like [Cucurbita pepo subsp. pepo]1.7e-4597.87Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESG+KHRLQKLQLNFP+DDVSFALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

TrEMBL top hitse value%identityAlignment
A0A0A0LED3 Origin recognition complex subunit 12.2e-4394.68Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKSCSKQSKIFLTAMVH+ YKTG+GEATFEKLAMTVS LCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLN PSDDVSFALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

A0A6J1EC47 Origin recognition complex subunit 18.1e-4697.87Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESG+KHRLQKLQLNFP+DDVSFALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

A0A6J1EHV7 Origin recognition complex subunit 18.1e-4697.87Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESG+KHRLQKLQLNFP+DDVSFALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

A0A6J1ICM7 Origin recognition complex subunit 18.1e-4697.87Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESG+KHRLQKLQLNFP+DDVSFALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

A0A6J1IG29 Origin recognition complex subunit 18.1e-4697.87Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESG+KHRLQKLQLNFP+DDVSFALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

SwissProt top hitse value%identityAlignment
Q58DC8 Origin recognition complex subunit 12.6e-0933.68Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKDK
        +K+ S   + FL A++ E  ++G+ EATF+++ +    LC   G  +P     + V  RLG CR++L E      L++++LN   DDV +ALK++
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKDK

Q5SMU7 Origin of replication complex subunit 11.7e-2964.89Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MK+C K  KI L AMVHELY++G+GE  F+KLA TV   C  N E  PGYD LLK+ C+LGE +IILCE G KH+LQKLQLN+PSDDV+FALK+
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

Q710E8 Origin of replication complex subunit 1A1.1e-3675.53Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKS SK S+IFLTAMVHELYKTGM E +F+++A TVS +C +NGE FPG+D LLK+GC LGECRI+LCE G KHRLQKLQLNFPSDDV+FALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

Q9JI69 Origin recognition complex subunit 11.2e-0933.68Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKDK
        +K+CS   + FL A++ E  ++G+ EATF+++      LC   G  +P     + V   LG CR++L E      L +++LN   DDV +ALK++
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKDK

Q9SU24 Origin of replication complex subunit 1B1.3e-3778.72Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKS SK SKIFLTAMVHELYKTGM E TF+++A TVS +C +NGE FPG+D LLK+GC LGECRIILCE G KHRLQKLQLNFPSDDV+FALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

Arabidopsis top hitse value%identityAlignment
AT4G12620.1 origin of replication complex 1B9.4e-3978.72Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKS SK SKIFLTAMVHELYKTGM E TF+++A TVS +C +NGE FPG+D LLK+GC LGECRIILCE G KHRLQKLQLNFPSDDV+FALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD

AT4G14700.1 origin recognition complex 18.0e-3875.53Show/hide
Query:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD
        MKS SK S+IFLTAMVHELYKTGM E +F+++A TVS +C +NGE FPG+D LLK+GC LGECRI+LCE G KHRLQKLQLNFPSDDV+FALKD
Subjt:  MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGTTGTTCTAAGCAGAGTAAGATCTTCTTGACAGCCATGGTGCACGAACTTTATAAAACTGGAATGGGTGAAGCAACCTTTGAAAAGCTTGCCATGACTGTCTC
GTATCTTTGTACAAGCAATGGAGAGGAATTTCCTGGATATGATGCTCTCTTGAAAGTTGGCTGTAGGCTTGGTGAGTGCAGAATTATTTTATGTGAATCAGGGGCTAAAC
ACCGGTTGCAAAAGTTACAGCTTAATTTTCCAAGTGATGACGTCTCATTTGCACTGAAAGACAAAGTGGAAGCAATGGCAGAACGCATAACAAAGATGCACCGTGAAGTA
GTTGAGCATTTGGAGGCTGCTGCTTCCTACAAAAACTGCTGGCTTACAGTGACAAGCATCACCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGTTGTTCTAAGCAGAGTAAGATCTTCTTGACAGCCATGGTGCACGAACTTTATAAAACTGGAATGGGTGAAGCAACCTTTGAAAAGCTTGCCATGACTGTCTC
GTATCTTTGTACAAGCAATGGAGAGGAATTTCCTGGATATGATGCTCTCTTGAAAGTTGGCTGTAGGCTTGGTGAGTGCAGAATTATTTTATGTGAATCAGGGGCTAAAC
ACCGGTTGCAAAAGTTACAGCTTAATTTTCCAAGTGATGACGTCTCATTTGCACTGAAAGACAAAGTGGAAGCAATGGCAGAACGCATAACAAAGATGCACCGTGAAGTA
GTTGAGCATTTGGAGGCTGCTGCTTCCTACAAAAACTGCTGGCTTACAGTGACAAGCATCACCACCTGA
Protein sequenceShow/hide protein sequence
MKSCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKDKVEAMAERITKMHREV
VEHLEAAASYKNCWLTVTSITT