; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G00340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G00340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMICOS complex subunit Mic10
Genome locationClcChr08:460360..466938
RNA-Seq ExpressionClc08G00340
SyntenyClc08G00340
Gene Ontology termsGO:0061617 - MICOS complex (cellular component)
InterPro domainsIPR007512 - MICOS complex subunit Mic10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039215.1 MICOS complex subunit Mic10 isoform X2 [Cucumis melo var. makuwa]4.6e-4294.57Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQV
        AENKGVV PPHDLNAKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLF+GST KF SPKITEAQPSQV
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQV

XP_008459687.1 PREDICTED: MICOS complex subunit Mic10 [Cucumis melo]1.3e-4194.51Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQ
        AENKGVV PPHDLNAKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLF+GST KF SPKITEAQPSQ
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQ

XP_011656128.1 uncharacterized protein LOC101210763 isoform X2 [Cucumis sativus]7.8e-4294.57Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQV
        AENKGVV PPHDL+AKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGST KF SPKITEAQPSQV
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQV

XP_038890568.1 uncharacterized protein LOC120080085 isoform X1 [Benincasa hispida]5.4e-4396.74Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQV
        AENKGV+ PPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGST KFASPKITEAQPSQV
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQV

XP_038890569.1 uncharacterized protein LOC120080085 isoform X2 [Benincasa hispida]1.6e-4296.7Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQ
        AENKGV+ PPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGST KFASPKITEAQPSQ
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQ

TrEMBL top hitse value%identityAlignment
A0A0A0KUY2 Uncharacterized protein4.7e-5389.92Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQVVGLRVGLD
        AENKGVV PPHDL+AKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGST KF SPKITEAQPSQVVGLRV LD
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQVVGLRVGLD

Query:  HWSIILSLSPQKWARDHSG
        HW IILS S QK A D SG
Subjt:  HWSIILSLSPQKWARDHSG

A0A1S3CAS1 MICOS complex subunit Mic106.4e-4294.51Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQ
        AENKGVV PPHDLNAKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLF+GST KF SPKITEAQPSQ
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQ

A0A5D3BKW9 MICOS complex subunit Mic10 isoform X22.2e-4294.57Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQV
        AENKGVV PPHDLNAKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLF+GST KF SPKITEAQPSQV
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQV

A0A6J1EC46 uncharacterized protein LOC1114327207.8e-4092.31Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQ
        AENK VV PPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGST KFASPK+T  Q SQ
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQ

A0A6J1I917 uncharacterized protein LOC1114726047.1e-4194.51Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQ
        AENK VV PPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGST KFASPKIT  QPSQ
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22520.1 Domain of unknown function (DUF543)1.6e-2971.59Show/hide
Query:  SPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGST----TKFASPKITEAQPSQ
        S   D+NAKWDACLDLT RRFVYSSL GAF GLLFFRSPVTRWASIAFGAG+GIGSAYTDC+ +F+ S+    T  A+PK TE   SQ
Subjt:  SPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGST----TKFASPKITEAQPSQ

AT1G22520.2 Domain of unknown function (DUF543)5.6e-3071.91Show/hide
Query:  SPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGST----TKFASPKITEAQPSQV
        S   D+NAKWDACLDLT RRFVYSSL GAF GLLFFRSPVTRWASIAFGAG+GIGSAYTDC+ +F+ S+    T  A+PK TE   SQV
Subjt:  SPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGST----TKFASPKITEAQPSQV

AT1G72170.1 Domain of unknown function (DUF543)9.5e-3068.09Show/hide
Query:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFE---GSTTKFASPK--ITEAQP
        AE K  V P +D+NAKWDACLDLT+RRFVYSSL GAF GLLFFRSPVTRWASIA GAG+GIGSAY+DC+  F+    S+   A+PK  ITE  P
Subjt:  AENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFE---GSTTKFASPK--ITEAQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGAACAAAGGTTTTGCTGAGAACAAAGGGGTTGTGTCTCCACCGCACGATTTGAATGCCAAGTGGGACGCTTGTCTTGATTTGACGCTCCGTCGATTCGTTTA
CTCTTCCTTGGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGCATTGGATCAGCATACACGG
ATTGTAATTCATTATTTGAAGGTTCCACCACAAAATTCGCATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGGTGGGGTTGAGAGTGGGGTTAGATCATTGGTCG
ATCATTCTCAGCTTGAGTCCTCAGAAATGGGCTCGTGACCATTCAGGTCTGAGAATATGTGGTCAAAGCATCCTTCCTTTGAGTTCTTATGTCCTCAAAATGCCCTCCTC
TGGGAGGATTAAGAAACAAGAGATCTGGGCTAAGATTAACTTGATTAATCTGGCAGAGATGGAGGGTCTGTTGGATGATCCTTTGAGGGGCAAGATTAGTCACAAATGCT
GTGAGAAGCAAGCTGTCTTGAGATTGAATGGATGTGAAACCGTAATTTTACTTGAGATTGTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAGAATTCCCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATATCATACAATACAACTTTATCCCTTGATAGCGTCTGTCTGACGGTTCCTTTCTGGATATGGCTG
AGAACAAAGGTTTTGCTGAGAACAAAGGGGTTGTGTCTCCACCGCACGATTTGAATGCCAAGTGGGACGCTTGTCTTGATTTGACGCTCCGTCGATTCGTTTACTCTTCC
TTGGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGCATTGGATCAGCATACACGGATTGTAA
TTCATTATTTGAAGGTTCCACCACAAAATTCGCATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGGTGGGGTTGAGAGTGGGGTTAGATCATTGGTCGATCATTC
TCAGCTTGAGTCCTCAGAAATGGGCTCGTGACCATTCAGGTCTGAGAATATGTGGTCAAAGCATCCTTCCTTTGAGTTCTTATGTCCTCAAAATGCCCTCCTCTGGGAGG
ATTAAGAAACAAGAGATCTGGGCTAAGATTAACTTGATTAATCTGGCAGAGATGGAGGGTCTGTTGGATGATCCTTTGAGGGGCAAGATTAGTCACAAATGCTGTGAGAA
GCAAGCTGTCTTGAGATTGAATGGATGTGAAACCGTAATTTTACTTGAGATTGTTTAAGCGTACGTTTCCCATGTTTGGTTCCCATTGTGTAATTCAAACGTTTTTGGTT
GTAGACATTATACTTCATTACCATGCATGCTGCAGATTTTTGTGGGCATCTGTAACTTTTTCCTGTTGCTAATACTAATAGAGTTACGTGAGCTGGAGAGGGAAAAAAAG
AAATCAATAAGTACTCTTCTTGCAACCCTCACTTTGTTTATTTACTTCATGCTTTGACAACCATCTTCTGTATCATACTCTTTACAGTTTGATGGCTTCAAGTAGTGGGA
AAACGTGATACATTATTTTGGACA
Protein sequenceShow/hide protein sequence
MAENKGFAENKGVVSPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTTKFASPKITEAQPSQVVGLRVGLDHWS
IILSLSPQKWARDHSGLRICGQSILPLSSYVLKMPSSGRIKKQEIWAKINLINLAEMEGLLDDPLRGKISHKCCEKQAVLRLNGCETVILLEIV