; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G00410 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G00410
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRpr2, RNAse P, putative
Genome locationClcChr08:689244..689879
RNA-Seq ExpressionClc08G00410
SyntenyClc08G00410
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG5123180.1 unnamed protein product [Candidula unifasciata]4.3e-1134.93Show/hide
Query:  EEVIKLEELMVPDSYQSDEECADLNSKSPSLFQCLIRRNVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDV
        E++++ E ++  D+   D+   D ++ +           V+NM++DEN VD +NM+  ENM +V+N++  EN VD +NM+  ENMVD +++++ EN VD 
Subjt:  EEVIKLEELMVPDSYQSDEECADLNSKSPSLFQCLIRRNVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDV

Query:  DNMINSENKVDVDNVINSENKVDDDEGNEEAKEVDLEETNEEFYMV
        +NM+  EN VD +N+++ EN VDD+   ++   V+ E   E+  M+
Subjt:  DNMINSENKVDVDNVINSENKVDDDEGNEEAKEVDLEETNEEFYMV

ETW47106.1 hypothetical protein PFMALIP_04775 [Plasmodium falciparum MaliPS096_E11]8.1e-1041.38Show/hide
Query:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD
        N DNMIN++N ++ DNMIN++NM++ DN++ ++N ++ DNM+N++NM++ DN++ ++N ++ DNM+N++N ++ DN++N++N +++D
Subjt:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD

KAF4326421.1 hypothetical protein CYL21_5384 [Plasmodium falciparum NF54]1.4e-0941.38Show/hide
Query:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD
        N DNMIN++N ++ DNMIN++NM++ DN++ ++N ++ DNM+N++NM++ DN++ ++N ++ DNM+N++N ++ DN++N++N +++D
Subjt:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD

KAG6607616.1 hypothetical protein SDJN03_00958, partial [Cucurbita argyrosperma subsp. sororia]7.3e-1143.14Show/hide
Query:  NSENKVDDDEGNEEAKEVDLEETNEE------FYMVLFDAFLAKHGIDKDYLD--QSSLQQILKTWLQKKLTSAEFRFKEAEIDLNFINFRYAICKRWLS
        NS  + + ++  E+ +E++ EE  EE      FY   F  F++KHG+D  +LD   S +Q++ K W+++++ +A+ R KEAEID+N IN RYAICK+WLS
Subjt:  NSENKVDDDEGNEEAKEVDLEETNEE------FYMVLFDAFLAKHGIDKDYLD--QSSLQQILKTWLQKKLTSAEFRFKEAEIDLNFINFRYAICKRWLS

Query:  SL
        SL
Subjt:  SL

SOS80747.1 conserved Plasmodium protein, unknown function, putative [Plasmodium sp. gorilla clade G1]4.8e-1041.38Show/hide
Query:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD
        N DNMIN++N ++ DN+IN++NMV+ DN++ ++N ++ DNM+N++N+++ DN+I ++N ++ DNM+N++N ++ DN++N++N +++D
Subjt:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD

TrEMBL top hitse value%identityAlignment
A0A024WKQ3 Uncharacterized protein3.9e-1041.38Show/hide
Query:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD
        N DNMIN++N ++ DNMIN++NM++ DN++ ++N ++ DNM+N++NM++ DN++ ++N ++ DNM+N++N ++ DN++N++N +++D
Subjt:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD

A0A2I0BRS7 Uncharacterized protein6.7e-1041.38Show/hide
Query:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD
        N DNMIN++N ++ DNMIN++NM++ DN++ ++N ++ DNM+N++NM++ DN++ ++N ++ DNM+N++N ++ DN++N++N +++D
Subjt:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD

A0A2P9BK05 Uncharacterized protein2.3e-1041.38Show/hide
Query:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD
        N DNMIN++N ++ DN+IN++NMV+ DN++ ++N ++ DNM+N++N+++ DN+I ++N ++ DNM+N++N ++ DN++N++N +++D
Subjt:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD

A0A5K1K8L4 Uncharacterized protein6.7e-1041.38Show/hide
Query:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD
        N DNMIN++N ++ DNMIN++NM++ DN++ ++N ++ DNM+N++NM++ DN++ ++N ++ DNM+N++N ++ DN++N++N +++D
Subjt:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD

W4J1C9 Uncharacterized protein1.5e-0941.38Show/hide
Query:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD
        N DNMIN++N ++ DNMIN++NM++ DN++ ++N ++ DNM+N++NM++ DN++ ++N ++ DNM+N++N ++ DN++N++N +++D
Subjt:  NVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENKVDVDNVINSENKVDDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGTGATTAAGCTTGAAGAGCTAATGGTTCCTGATTCATACCAATCTGATGAAGAATGTGCAGATTTGAACTCCAAATCTCCAAGTCTTTTCCAATGCTTGAT
AAGAAGGAATGTCGATAATATGATTAATGATGAGAATAGGGTTGATGTTGATAATATGATTAATAGTGAGAATATGGTTGATGTTGATAATGTGATTAAGAGTGAGAATA
AGGTTGATGTTGATAATATGATTAATAGTGAGAATATGGTTGATGTTGATAATGTGATTAAGAGTGAGAATAAGGTTGATGTTGATAATATGATTAATAGTGAGAATAAG
GTTGATGTTGATAATGTGATTAATAGTGAGAATAAGGTTGATGATGATGAGGGTAATGAAGAAGCAAAAGAGGTTGATTTAGAAGAAACAAATGAAGAGTTCTATATGGT
GTTGTTTGATGCATTCTTGGCCAAACATGGGATTGACAAAGATTATTTGGACCAATCTTCTTTACAACAAATCCTCAAGACTTGGCTCCAAAAAAAGCTTACTTCTGCTG
AGTTCCGTTTCAAGGAGGCTGAAATAGATCTCAACTTCATCAACTTTAGATATGCTATTTGCAAAAGATGGCTTTCTTCATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGTGATTAAGCTTGAAGAGCTAATGGTTCCTGATTCATACCAATCTGATGAAGAATGTGCAGATTTGAACTCCAAATCTCCAAGTCTTTTCCAATGCTTGAT
AAGAAGGAATGTCGATAATATGATTAATGATGAGAATAGGGTTGATGTTGATAATATGATTAATAGTGAGAATATGGTTGATGTTGATAATGTGATTAAGAGTGAGAATA
AGGTTGATGTTGATAATATGATTAATAGTGAGAATATGGTTGATGTTGATAATGTGATTAAGAGTGAGAATAAGGTTGATGTTGATAATATGATTAATAGTGAGAATAAG
GTTGATGTTGATAATGTGATTAATAGTGAGAATAAGGTTGATGATGATGAGGGTAATGAAGAAGCAAAAGAGGTTGATTTAGAAGAAACAAATGAAGAGTTCTATATGGT
GTTGTTTGATGCATTCTTGGCCAAACATGGGATTGACAAAGATTATTTGGACCAATCTTCTTTACAACAAATCCTCAAGACTTGGCTCCAAAAAAAGCTTACTTCTGCTG
AGTTCCGTTTCAAGGAGGCTGAAATAGATCTCAACTTCATCAACTTTAGATATGCTATTTGCAAAAGATGGCTTTCTTCATTGTGA
Protein sequenceShow/hide protein sequence
MEEVIKLEELMVPDSYQSDEECADLNSKSPSLFQCLIRRNVDNMINDENRVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENMVDVDNVIKSENKVDVDNMINSENK
VDVDNVINSENKVDDDEGNEEAKEVDLEETNEEFYMVLFDAFLAKHGIDKDYLDQSSLQQILKTWLQKKLTSAEFRFKEAEIDLNFINFRYAICKRWLSSL