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Clc08G00450 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G00450
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiontranscription factor bHLH81
Genome locationClcChr08:807761..812299
RNA-Seq ExpressionClc08G00450
SyntenyClc08G00450
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592393.1 Transcription factor basic helix-loop-helix 80, partial [Cucurbita argyrosperma subsp. sororia]1.0e-10989.17Show/hide
Query:  MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF
        MQSTTG GATGSRS GGG+GGGLARFRSAPAAWLEALLED+EED L+PN CLTQLLA +SSDLDSPADQ LF+PNPS  F RQNSSPAEFL ASGIGEGF
Subjt:  MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF

Query:  YTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM
        Y++YA+NSS  L+ISPTSKR REVD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM
Subjt:  YTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM

Query:  DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC C VKE
Subjt:  DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

XP_004141566.1 transcription factor bHLH81 isoform X1 [Cucumis sativus]1.1e-10888.62Show/hide
Query:  MQSTTGAGAT-----GSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDS-PADQPLFDPNPSPAFHRQNSSPAEFLAAS
        MQSTTGA +T      SR+S G  G GLARFRSAPAAWLEALLEDDEEDPLKPN CLTQLLAA+SSDLDS PAD PLFDPNPSPAFHRQNSSP EFLA S
Subjt:  MQSTTGAGAT-----GSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDS-PADQPLFDPNPSPAFHRQNSSPAEFLAAS

Query:  GIGEGFYTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ
        GI EGFYT+Y LNSSPTLDISPTSK + +VD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ
Subjt:  GIGEGFYTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ

Query:  EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
Subjt:  EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

XP_008459678.1 PREDICTED: transcription factor bHLH80 isoform X1 [Cucumis melo]6.6e-10989.34Show/hide
Query:  MQSTTGAGAT---GSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDL-DSPADQPLFDPNPSPAFHRQNSSPAEFLAASGI
        MQSTTGA AT    SR+SGGG   GLARFRSAPAAWLEALLEDDEEDPLKPN CLTQLLAA+SSDL  +P D PLFDPNPSPAFHRQNSSP EFLA SGI
Subjt:  MQSTTGAGAT---GSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDL-DSPADQPLFDPNPSPAFHRQNSSPAEFLAASGI

Query:  GEGFYTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV
         EGFYT+Y LNSSPTLDISPTSK A +VD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV
Subjt:  GEGFYTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV

Query:  VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
Subjt:  VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

XP_022925421.1 transcription factor bHLH81 [Cucurbita moschata]1.0e-10989.17Show/hide
Query:  MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF
        MQSTTG GATGSRS GGG+GGGLARFRSAPAAWLEALLED+EED L+PN CLTQLLA +SSDLDSPADQ LF+PNPS  F RQNSSPAEFL ASGIGEGF
Subjt:  MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF

Query:  YTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM
        Y++YA+NSS  L+ISPTSKR REVD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM
Subjt:  YTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM

Query:  DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC C VKE
Subjt:  DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

XP_038891266.1 transcription factor bHLH80-like [Benincasa hispida]2.8e-12397.5Show/hide
Query:  MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF
        MQSTTGAGATGSRSSGGG G GLARFRSAPAAWLEALLEDDEEDPLKP+HCLTQLLAA+SSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF
Subjt:  MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF

Query:  YTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM
        YTAYALNSSPTLD+SPTSKRAREVD QNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM
Subjt:  YTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM

Query:  DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
Subjt:  DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

TrEMBL top hitse value%identityAlignment
A0A0A0KY01 BHLH domain-containing protein5.5e-10988.62Show/hide
Query:  MQSTTGAGAT-----GSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDS-PADQPLFDPNPSPAFHRQNSSPAEFLAAS
        MQSTTGA +T      SR+S G  G GLARFRSAPAAWLEALLEDDEEDPLKPN CLTQLLAA+SSDLDS PAD PLFDPNPSPAFHRQNSSP EFLA S
Subjt:  MQSTTGAGAT-----GSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDS-PADQPLFDPNPSPAFHRQNSSPAEFLAAS

Query:  GIGEGFYTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ
        GI EGFYT+Y LNSSPTLDISPTSK + +VD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ
Subjt:  GIGEGFYTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ

Query:  EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
Subjt:  EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

A0A1S3CBY9 transcription factor bHLH80 isoform X13.2e-10989.34Show/hide
Query:  MQSTTGAGAT---GSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDL-DSPADQPLFDPNPSPAFHRQNSSPAEFLAASGI
        MQSTTGA AT    SR+SGGG   GLARFRSAPAAWLEALLEDDEEDPLKPN CLTQLLAA+SSDL  +P D PLFDPNPSPAFHRQNSSP EFLA SGI
Subjt:  MQSTTGAGAT---GSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDL-DSPADQPLFDPNPSPAFHRQNSSPAEFLAASGI

Query:  GEGFYTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV
         EGFYT+Y LNSSPTLDISPTSK A +VD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV
Subjt:  GEGFYTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV

Query:  VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
Subjt:  VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

A0A6J1DLX6 transcription factor bHLH80-like2.2e-9479.53Show/hide
Query:  MQSTTGAGATGSRSSGGGTGG----GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFD----PNPSPAFHRQNSSPAEFLA
        MQSTTG G T   SSGGG  G    GLARFRSAPA WLEALLEDDEEDPLKPN CLTQLLA +S  L SP DQ LFD    PNPSPAF RQNSSPAEFL 
Subjt:  MQSTTGAGATGSRSSGGGTGG----GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFD----PNPSPAFHRQNSSPAEFLA

Query:  ASGIGEGFYTAYALNS------SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRI
            GEGFY+AY + S      SP LDISPTSKR REV+ QNF  KFS QLKRE SGVSSL+DMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRT+I
Subjt:  ASGIGEGFYTAYALNS------SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRI

Query:  SDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        SDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ+QIQELTEHQR CKCMVKE
Subjt:  SDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

A0A6J1EC61 transcription factor bHLH815.0e-11089.17Show/hide
Query:  MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF
        MQSTTG GATGSRS GGG+GGGLARFRSAPAAWLEALLED+EED L+PN CLTQLLA +SSDLDSPADQ LF+PNPS  F RQNSSPAEFL ASGIGEGF
Subjt:  MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF

Query:  YTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM
        Y++YA+NSS  L+ISPTSKR REVD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM
Subjt:  YTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM

Query:  DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC C VKE
Subjt:  DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

A0A6J1ICS6 transcription factor bHLH813.0e-10788.33Show/hide
Query:  MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF
        MQSTTG GATGSRSS    GGGLARFRSAPAAWLEALLED+EED L+PN CLTQLLA +SSDLDSPADQ LF+PNPS  F RQNSSPAEFL ASGIGEGF
Subjt:  MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGF

Query:  YTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM
        Y++YA+NSS  L+ISPTSKR REVD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM
Subjt:  YTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNM

Query:  DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC C VKE
Subjt:  DKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

SwissProt top hitse value%identityAlignment
Q66GR3 Transcription factor bHLH1306.4e-3062.5Show/hide
Query:  LKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
        L +  S  S ++ ++    L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQE+VPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++  CKC
Subjt:  LKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC

Query:  MVKE
        M KE
Subjt:  MVKE

Q8H102 Transcription factor bHLH1282.6e-2337.65Show/hide
Query:  SRSSGGGTGGG---LARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPA--------DQPLFDPNPSPA-FHRQNSSPAEFLAASGIGEG
        S   GGG   G   LAR RS+PA +   L  D      K N  L Q  +  S    S           Q  F  + S A  +  N +P    +       
Subjt:  SRSSGGGTGGG---LARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPA--------DQPLFDPNPSPA-FHRQNSSPAEFLAASGIGEG

Query:  FYTAYALNS------SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKL
         + A   +S      S    ++  SKR++++D   FS    P      S  S        +L EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KL
Subjt:  FYTAYALNS------SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKL

Query:  QEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        Q++VPNMDKQT+ +DML+ AV+++K LQ Q+Q L + Q  C C   E
Subjt:  QEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

Q9C690 Transcription factor bHLH1223.5e-2863.73Show/hide
Query:  PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC
        P L    S   SL D  +E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQ++VPNMD QTNTADML+ AV+Y+K LQ+Q++ L E + RC
Subjt:  PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC

Query:  KC
        +C
Subjt:  KC

Q9C8P8 Transcription factor bHLH801.7e-6758.49Show/hide
Query:  MQSTTGAGATGSRSSGGGTGG-----GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAA------------DSSDLDSPADQPLFDPNPSPAFHRQ
        MQST  +G  GS   GGG GG     GL+R RSAPA W+E LLE+DEE+ LKPN CLT+LL              DS +  S  +Q L++ +    FHRQ
Subjt:  MQSTTGAGATGSRSSGGGTGG-----GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAA------------DSSDLDSPADQPLFDPNPSPAFHRQ

Query:  NSSPAEFLAASGIG-EGFYTAYALNS-----SPTLDISPTSKRAREVDPQNFSPKFSPQLKRE--GSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPR
        NSSPA+FL+ SG G +G+++ + + +     S  +DISPT KR+R+++ Q     FS QLK E    G+S ++DM M+K+ EDSVPCRVRAKRGCATHPR
Subjt:  NSSPAEFLAASGIG-EGFYTAYALNS-----SPTLDISPTSKRAREVDPQNFSPKFSPQLKRE--GSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPR

Query:  SIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        SIAERVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVEYVK LQ QIQELTE Q+RCKC  KE
Subjt:  SIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

Q9M0R0 Transcription factor bHLH812.5e-6657.79Show/hide
Query:  TGAGATGSRSSGGGTGG-------GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDS---------PADQPLFDPNPSPAFHRQNSSPA
        T  G++G    GGG GG       GL+R RSAPA WLEALLE+DEE+ LKPN  LT LL  +S+DL +         P +Q L+       FHRQNS+PA
Subjt:  TGAGATGSRSSGGGTGG-------GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDS---------PADQPLFDPNPSPAFHRQNSSPA

Query:  EFLAASGIGEGFYTAYALNS-----SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGS------GVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSI
        +FL+ S   +GF  ++ + +     S  +D+SP SKR+RE++    SP+F+ Q+K E S      GVSS+ DM ME L+EDSV  RVRAKRGCATHPRSI
Subjt:  EFLAASGIGEGFYTAYALNS-----SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGS------GVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSI

Query:  AERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        AERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAVEYVK LQ+QIQELTE Q+RC C+ KE
Subjt:  AERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

Arabidopsis top hitse value%identityAlignment
AT1G35460.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.2e-6858.49Show/hide
Query:  MQSTTGAGATGSRSSGGGTGG-----GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAA------------DSSDLDSPADQPLFDPNPSPAFHRQ
        MQST  +G  GS   GGG GG     GL+R RSAPA W+E LLE+DEE+ LKPN CLT+LL              DS +  S  +Q L++ +    FHRQ
Subjt:  MQSTTGAGATGSRSSGGGTGG-----GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAA------------DSSDLDSPADQPLFDPNPSPAFHRQ

Query:  NSSPAEFLAASGIG-EGFYTAYALNS-----SPTLDISPTSKRAREVDPQNFSPKFSPQLKRE--GSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPR
        NSSPA+FL+ SG G +G+++ + + +     S  +DISPT KR+R+++ Q     FS QLK E    G+S ++DM M+K+ EDSVPCRVRAKRGCATHPR
Subjt:  NSSPAEFLAASGIG-EGFYTAYALNS-----SPTLDISPTSKRAREVDPQNFSPKFSPQLKRE--GSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPR

Query:  SIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        SIAERVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVEYVK LQ QIQELTE Q+RCKC  KE
Subjt:  SIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE

AT1G51140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.5e-2963.73Show/hide
Query:  PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC
        P L    S   SL D  +E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQ++VPNMD QTNTADML+ AV+Y+K LQ+Q++ L E + RC
Subjt:  PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC

Query:  KC
        +C
Subjt:  KC

AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.5e-3162.5Show/hide
Query:  LKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
        L +  S  S ++ ++    L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQE+VPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++  CKC
Subjt:  LKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC

Query:  MVKE
        M KE
Subjt:  MVKE

AT2G43140.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.1e-2449.62Show/hide
Query:  NSSPTLDISPTSKRAREVDPQNFSPKFS-PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTN
        +S  +  I    KR++  D      ++S PQ   E + + +L+++      EDSVPCR RAKRG ATHPRSIAER RRTRIS +++KLQE+VPNMDKQT+
Subjt:  NSSPTLDISPTSKRAREVDPQNFSPKFS-PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTN

Query:  TADMLEEAVEYVKFLQKQIQELTEHQRRCKC
         ADML+ AVE++K LQ Q++ L +   RC C
Subjt:  TADMLEEAVEYVKFLQKQIQELTEHQRRCKC

AT4G09180.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.8e-6757.79Show/hide
Query:  TGAGATGSRSSGGGTGG-------GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDS---------PADQPLFDPNPSPAFHRQNSSPA
        T  G++G    GGG GG       GL+R RSAPA WLEALLE+DEE+ LKPN  LT LL  +S+DL +         P +Q L+       FHRQNS+PA
Subjt:  TGAGATGSRSSGGGTGG-------GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDS---------PADQPLFDPNPSPAFHRQNSSPA

Query:  EFLAASGIGEGFYTAYALNS-----SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGS------GVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSI
        +FL+ S   +GF  ++ + +     S  +D+SP SKR+RE++    SP+F+ Q+K E S      GVSS+ DM ME L+EDSV  RVRAKRGCATHPRSI
Subjt:  EFLAASGIGEGFYTAYALNS-----SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGS------GVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSI

Query:  AERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
        AERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAVEYVK LQ+QIQELTE Q+RC C+ KE
Subjt:  AERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCCACAACTGGTGCTGGTGCTACTGGTAGTCGTAGCTCCGGCGGCGGTACCGGCGGTGGCCTCGCTCGCTTCCGCTCTGCCCCTGCCGCCTGGTTGGAAGCGCT
TTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCACTGCTTGACTCAGCTTCTCGCCGCCGACTCCTCCGACCTCGACTCTCCCGCTGATCAGCCCTTGTTCGACC
CCAATCCCTCCCCGGCCTTCCACAGACAGAATAGCTCTCCCGCCGAGTTTCTCGCCGCCTCTGGAATTGGGGAAGGATTTTACACTGCCTATGCTCTCAATTCCTCCCCC
ACTCTTGACATCTCTCCCACCTCCAAGCGAGCTAGAGAAGTCGACCCCCAAAACTTCTCCCCCAAATTTTCACCTCAACTGAAAAGGGAAGGAAGTGGAGTTTCCAGTTT
AATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGGGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCGGAGAGGGTTCGTAGGA
CTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAGGTTGTCCCCAACATGGATAAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTT
CAAAAGCAAATTCAGGAACTCACGGAGCATCAGCGCAGGTGCAAATGCATGGTGAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
GTGAACACGTCATCCAAACTCATTGCTGGGATCAGCGTTGATAAGTAAGTGATGATATGATGAGTGGGTGGAAAACGAGGGTTTAGCGTACACCCGAGAAGCAGAGGATC
GTAGGATTGGGTTTCAATGTTTCATTCTCCGAAAGAGGCCCAGAGGAACAATCTGGCCCCTCCCTCGTCCCCCGTCTGTGACTATGAGTGAGTGACCCTTTCCAAAGATA
GAATTCTCAACCAAAAAGGAACTCCCCGACTTTTGCTTTCCCTTTCCCTGCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTTCCCATCCCCCTTCCAACGAATAACCAAAC
ATAAATTTATTTAAAATAACCCACCACAAATCTCCTGCTCCACTCACTCCCAAGCAGATGCAGTCCACAACTGGTGCTGGTGCTACTGGTAGTCGTAGCTCCGGCGGCGG
TACCGGCGGTGGCCTCGCTCGCTTCCGCTCTGCCCCTGCCGCCTGGTTGGAAGCGCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCACTGCTTGACTCAGC
TTCTCGCCGCCGACTCCTCCGACCTCGACTCTCCCGCTGATCAGCCCTTGTTCGACCCCAATCCCTCCCCGGCCTTCCACAGACAGAATAGCTCTCCCGCCGAGTTTCTC
GCCGCCTCTGGAATTGGGGAAGGATTTTACACTGCCTATGCTCTCAATTCCTCCCCCACTCTTGACATCTCTCCCACCTCCAAGCGAGCTAGAGAAGTCGACCCCCAAAA
CTTCTCCCCCAAATTTTCACCTCAACTGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTAATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAA
GGGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCGGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAGGTTGTCCCCAACATGGAT
AAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATTCAGGAACTCACGGAGCATCAGCGCAGGTGCAAATGCATGGT
GAAGGAATGACATGTTGAAGGAGGAAGACTACTCCAGCCTCTGCAGAAATCGCCCTTCCACGATTACTGTAAATTAGTAGATTTCTTGGTTGAAAGGTAGTAAAAGGTAA
ATTGCTGTTTTTGCTATAATATTGTATTCTCTTTGGTTCTAAAGAAAATATCAACCTTGTAATGCATGCATTCAAATATATTGCATTCGTACGCAATAAGCAGGTGTAAC
AAAATGTGGGGAACTGCTCTCCTTTCTTTTTTTTCTTTCTTTTTT
Protein sequenceShow/hide protein sequence
MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGFYTAYALNSSP
TLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFL
QKQIQELTEHQRRCKCMVKE