; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G00595 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G00595
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionATP synthase subunit alpha, mitochondrial
Genome locationClcChr08:1066132..1068335
RNA-Seq ExpressionClc08G00595
SyntenyClc08G00595
Gene Ontology termsGO:0046034 - ATP metabolic process (biological process)
GO:1902600 - proton transmembrane transport (biological process)
InterPro domainsIPR023366 - ATP synthase subunit alpha, N-terminal domain-like superfamily
IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AQY61295.1 Pol [Coffea arabica]3.8e-2548.15Show/hide
Query:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK
        T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P +Q           K GR + SKDKN  KKR+ID S              K+
Subjt:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK

Query:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW
         ++E+    E +++   SR S    E +IDNIFAYN+ALDI++E+E+ E + V+EC+ R DW
Subjt:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW

AQY61299.1 Pol [Coffea canephora]4.5e-2648.77Show/hide
Query:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK
        T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P +Q           K GR + SKDKN  KKR ID S              K+
Subjt:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK

Query:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW
         ++E+    E +++   SR S    E +IDNIFAYN+ALDI++E+E+ EP+ V+EC+ R DW
Subjt:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW

AQY61300.1 Pol [Coffea eugenioides]5.8e-2648.15Show/hide
Query:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK
        T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P  Q           K GR + SKDKN  KKR +D S              K+
Subjt:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK

Query:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW
         ++E+  I E +++   S+ S    E +IDNIFAYN+ALDI++E+E+ EP+ V+EC+ R DW
Subjt:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW

PIN26225.1 hypothetical protein CDL12_01027 [Handroanthus impetiginosus]9.3e-2445.29Show/hide
Query:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKNHKKRKIDNSKKDLVEDINIRE-----
        T QCELEVQKIIHLQNIANQL DAF D  +VTKSHIPV N P +IDIP  Q           K GR + SKDKN +KRK  N    ++E   + E     
Subjt:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKNHKKRKIDNSKKDLVEDINIRE-----

Query:  -----ETLDMTDSRISEE-----------------VIDNIFAYNVALDIISENENFEPKLVEECQHRKDW
             E + + +S  +EE                 V+DN FAY +A++I+ ++E+FEPK VEEC+ R DW
Subjt:  -----ETLDMTDSRISEE-----------------VIDNIFAYNVALDIISENENFEPKLVEECQHRKDW

RVW81532.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.6e-2341.62Show/hide
Query:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ---------KHGRSVSSKDKNHKKRKIDN-----------------SKK
        TNQCELEVQ+IIHLQN+ANQLLDAFID KKVTKSHIP AN P++ID+P +Q         K GR V S D   +KR+                     K 
Subjt:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ---------KHGRSVSSKDKNHKKRKIDN-----------------SKK

Query:  DLVEDINIREETLDMT--------DSRISEE-------------------VIDNIFAYNVALDIISENENFEPKLVEECQHRKDW
          +E+  I ++TL+ T        ++++ E                    VI+NIF++ VA DII  +E+ EP+ VEEC+HR DW
Subjt:  DLVEDINIREETLDMT--------DSRISEE-------------------VIDNIFAYNVALDIISENENFEPKLVEECQHRKDW

TrEMBL top hitse value%identityAlignment
A0A1U9WYB0 Pol2.8e-2648.15Show/hide
Query:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK
        T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P  Q           K GR + SKDKN  KKR +D S              K+
Subjt:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK

Query:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW
         ++E+  I E +++   S+ S    E +IDNIFAYN+ALDI++E+E+ EP+ V+EC+ R DW
Subjt:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW

A0A1U9WYD5 Pol2.2e-2648.77Show/hide
Query:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK
        T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P +Q           K GR + SKDKN  KKR ID S              K+
Subjt:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK

Query:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW
         ++E+    E +++   SR S    E +IDNIFAYN+ALDI++E+E+ EP+ V+EC+ R DW
Subjt:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW

A0A1U9WYE0 Pol1.8e-2548.15Show/hide
Query:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK
        T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P +Q           K GR + SKDKN  KKR+ID S              K+
Subjt:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKN-HKKRKIDNS--------------KK

Query:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW
         ++E+    E +++   SR S    E +IDNIFAYN+ALDI++E+E+ E + V+EC+ R DW
Subjt:  DLVEDINIREETLDMTDSRIS----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW

A0A2G9I8Z0 Uncharacterized protein4.5e-2445.29Show/hide
Query:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKNHKKRKIDNSKKDLVEDINIRE-----
        T QCELEVQKIIHLQNIANQL DAF D  +VTKSHIPV N P +IDIP  Q           K GR + SKDKN +KRK  N    ++E   + E     
Subjt:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ-----------KHGRSVSSKDKNHKKRKIDNSKKDLVEDINIRE-----

Query:  -----ETLDMTDSRISEE-----------------VIDNIFAYNVALDIISENENFEPKLVEECQHRKDW
             E + + +S  +EE                 V+DN FAY +A++I+ ++E+FEPK VEEC+ R DW
Subjt:  -----ETLDMTDSRISEE-----------------VIDNIFAYNVALDIISENENFEPKLVEECQHRKDW

A0A438HAQ6 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-2341.62Show/hide
Query:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ---------KHGRSVSSKDKNHKKRKIDN-----------------SKK
        TNQCELEVQ+IIHLQN+ANQLLDAFID KKVTKSHIP AN P++ID+P +Q         K GR V S D   +KR+                     K 
Subjt:  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ---------KHGRSVSSKDKNHKKRKIDN-----------------SKK

Query:  DLVEDINIREETLDMT--------DSRISEE-------------------VIDNIFAYNVALDIISENENFEPKLVEECQHRKDW
          +E+  I ++TL+ T        ++++ E                    VI+NIF++ VA DII  +E+ EP+ VEEC+HR DW
Subjt:  DLVEDINIREETLDMT--------DSRISEE-------------------VIDNIFAYNVALDIISENENFEPKLVEECQHRKDW

SwissProt top hitse value%identityAlignment
P05492 ATP synthase subunit alpha, mitochondrial5.0e-2071.83Show/hide
Query:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCE
        MEFSP AA+LTTLLESRITNFY NFQVDEI +V+SVGDGI RVYGL EIQA E+VEFAS +  I +  + E
Subjt:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCE

P0C520 ATP synthase subunit alpha, mitochondrial8.5e-2071.83Show/hide
Query:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCE
        MEFSP AA+LTTLLESR+TNFY NFQVDEI +VVSVGDGI RVYGL EIQA E+VEFAS +  I +  + E
Subjt:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCE

P0C521 ATP synthase subunit alpha, mitochondrial8.5e-2071.83Show/hide
Query:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCE
        MEFSP AA+LTTLLESR+TNFY NFQVDEI +VVSVGDGI RVYGL EIQA E+VEFAS +  I +  + E
Subjt:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCE

P0C522 ATP synthase subunit alpha, mitochondrial8.5e-2071.83Show/hide
Query:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCE
        MEFSP AA+LTTLLESR+TNFY NFQVDEI +VVSVGDGI RVYGL EIQA E+VEFAS +  I +  + E
Subjt:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCE

P12862 ATP synthase subunit alpha, mitochondrial8.5e-2071.83Show/hide
Query:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCE
        MEFSP AA+LTTLLESR+TNFY NFQVDEI +VVSVGDGI RVYGL EIQA E+VEFAS +  I +  + E
Subjt:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCE

Arabidopsis top hitse value%identityAlignment
AT2G07698.1 ATPase, F1 complex, alpha subunit protein1.1e-1470.91Show/hide
Query:  AAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRI
        AA+LT L ESRI NFY NFQVDEI +VVSVGDGI +VYGL EIQA E+V FA+ +
Subjt:  AAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRI

ATCG00120.1 ATP synthase subunit alpha7.9e-0537.25Show/hide
Query:  AAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEF
        A +++ ++  RI  + +   +     V+ VGDGI R+YGL E+ A E+VEF
Subjt:  AAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEF

ATMG01190.1 ATP synthase subunit 15.3e-1770.49Show/hide
Query:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRI
        ME SP AA+LT L ESRI NFY NFQVDEI +VVSVGDGI +VYGL EIQA E+V FA+ +
Subjt:  MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCTCTCCCGGAGCTGCAAAACTAACGACTTTATTAGAAAGTCGAATTACCAACTTTTACAAGAATTTTCAAGTGGATGAGATTAGTCAAGTGGTCTCAGTTGG
AGATGGGATTACACGTGTTTATGGATTGAAGGAGATTCAAGCTAGGGAAATTGTGGAATTTGCCAGCCGAATTAATGTTATCCTTGTTACAAATCAATGTGAACTTGAAG
TTCAGAAAATAATTCATTTGCAAAATATAGCAAATCAATTACTAGATGCATTTATAGATGCAAAGAAAGTAACTAAGTCACATATACCAGTTGCAAATGTTCCATCGAAA
ATTGATATCCCAACACAACAAAAGCATGGTAGATCAGTGAGTTCCAAAGATAAAAATCATAAGAAAAGAAAAATAGACAATAGTAAAAAAGACTTGGTTGAGGATATAAA
TATTCGTGAAGAAACCTTGGACATGACTGATAGTCGAATTAGTGAAGAAGTTATTGACAACATTTTTGCGTATAATGTTGCTCTTGATATTATATCTGAAAATGAGAATT
TTGAACCAAAATTAGTTGAAGAATGTCAACATAGAAAAGATTGGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCTCTCCCGGAGCTGCAAAACTAACGACTTTATTAGAAAGTCGAATTACCAACTTTTACAAGAATTTTCAAGTGGATGAGATTAGTCAAGTGGTCTCAGTTGG
AGATGGGATTACACGTGTTTATGGATTGAAGGAGATTCAAGCTAGGGAAATTGTGGAATTTGCCAGCCGAATTAATGTTATCCTTGTTACAAATCAATGTGAACTTGAAG
TTCAGAAAATAATTCATTTGCAAAATATAGCAAATCAATTACTAGATGCATTTATAGATGCAAAGAAAGTAACTAAGTCACATATACCAGTTGCAAATGTTCCATCGAAA
ATTGATATCCCAACACAACAAAAGCATGGTAGATCAGTGAGTTCCAAAGATAAAAATCATAAGAAAAGAAAAATAGACAATAGTAAAAAAGACTTGGTTGAGGATATAAA
TATTCGTGAAGAAACCTTGGACATGACTGATAGTCGAATTAGTGAAGAAGTTATTGACAACATTTTTGCGTATAATGTTGCTCTTGATATTATATCTGAAAATGAGAATT
TTGAACCAAAATTAGTTGAAGAATGTCAACATAGAAAAGATTGGATTTAA
Protein sequenceShow/hide protein sequence
MEFSPGAAKLTTLLESRITNFYKNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSK
IDIPTQQKHGRSVSSKDKNHKKRKIDNSKKDLVEDINIREETLDMTDSRISEEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDWI