; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G00980 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G00980
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal RNA processing protein 36-like protein
Genome locationClcChr08:1663029..1668810
RNA-Seq ExpressionClc08G00980
SyntenyClc08G00980
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000469 - cleavage involved in rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030686 - 90S preribosome (cellular component)
InterPro domainsIPR009292 - rRNA biogenesis protein RRP36


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648994.1 hypothetical protein Csa_008922 [Cucumis sativus]1.0e-11081.47Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
        MKK+ SSVPSSGK+I+EEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTK+EKK GRANKNRPMEVSSRKPVSRFREVIQAPK
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK

Query:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        N+VRDPRFESLSG LD DGFKKRYSFIYE  LPAEKEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
Subjt:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  K-------------------------------SEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKDWTLSLGK
        K                               +EIRKQRLVEKYT+LKSTGKLDAYVER+RRKNAAKDRRYIPYQRS  +  S+GK
Subjt:  K-------------------------------SEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKDWTLSLGK

XP_004141535.1 ribosomal RNA processing protein 36 homolog [Cucumis sativus]1.1e-11593.9Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
        MKK+ SSVPSSGK+I+EEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTK+EKK GRANKNRPMEVSSRKPVSRFREVIQAPK
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK

Query:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        N+VRDPRFESLSG LD DGFKKRYSFIYE  LPAEKEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
Subjt:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS
        KSEIRKQRLVEKYT+LKSTGKLDAYVER+RRKNAAKDRRYIPYQRS
Subjt:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS

XP_008456647.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo]2.0e-11795.12Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
        MKK+ SSVPSSGK+IMEEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTK+EKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK

Query:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        ++VRDPRFESLSG LDVDGFKKRYSFIYE NLPAEKEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
Subjt:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS
        KSEIRKQRLVEKYT+LKSTGKLDAYVER+RRKNAAKDRRYIPYQRS
Subjt:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS

XP_022973531.1 ribosomal RNA processing protein 36 homolog [Cucurbita maxima]5.2e-11089.43Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
        MKKH +SVPSS K++ME+E EDLE SSS++SLDSEEENIERELADVTFEELQR RSDGSHSMYQKT +EKKG RANKNRPMEVSS+KPV RFREVIQAPK
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK

Query:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        N+VRDPRFESL+G+LDV+GFKKRYSFIYENNLPAEKEELKKQLRKTND NVVEELKKQLSWIDKQFKSDSTKRVDAAILA HKKKEREAAKHGKKPFYLK
Subjt:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS
        KSEIRKQRL EKY +LKSTGKLDAY+ERRRRKNAAKDRRYIPYQRS
Subjt:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS

XP_038889542.1 ribosomal RNA processing protein 36 homolog [Benincasa hispida]5.7e-11795.12Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
        MKKH SSV SSGK+IMEEESED ESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSM+QKTK+EKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK

Query:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        N+VRDPRFESLSG LDVDGFKKRYSFIYEN LPAEKEELKKQLRKTNDPNVVEELK QLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
Subjt:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS
        KSEIRKQRL+EKYTSLKSTGKLDAYVERRRRKNAAKDRRYIP+QRS
Subjt:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS

TrEMBL top hitse value%identityAlignment
A0A0A0KUS3 Uncharacterized protein5.2e-11693.9Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
        MKK+ SSVPSSGK+I+EEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTK+EKK GRANKNRPMEVSSRKPVSRFREVIQAPK
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK

Query:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        N+VRDPRFESLSG LD DGFKKRYSFIYE  LPAEKEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
Subjt:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS
        KSEIRKQRLVEKYT+LKSTGKLDAYVER+RRKNAAKDRRYIPYQRS
Subjt:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS

A0A1S3C3C0 ribosomal RNA processing protein 36 homolog9.5e-11895.12Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
        MKK+ SSVPSSGK+IMEEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTK+EKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK

Query:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        ++VRDPRFESLSG LDVDGFKKRYSFIYE NLPAEKEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
Subjt:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS
        KSEIRKQRLVEKYT+LKSTGKLDAYVER+RRKNAAKDRRYIPYQRS
Subjt:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS

A0A5A7SR00 Ribosomal RNA processing protein 36-like protein9.5e-11895.12Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
        MKK+ SSVPSSGK+IMEEESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKTK+EKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK

Query:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        ++VRDPRFESLSG LDVDGFKKRYSFIYE NLPAEKEELKKQLRKTNDPNV EELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
Subjt:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS
        KSEIRKQRLVEKYT+LKSTGKLDAYVER+RRKNAAKDRRYIPYQRS
Subjt:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS

A0A6J1EBL5 ribosomal RNA processing protein 36 homolog1.6e-10989.02Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
        MKKH SSVPSS K++ME+E EDLE SSS++SLDSEEENIERELADVTFEELQR RSDGSHSMYQKT +EKKG RANKNRPMEVSS+KPV RFREVIQAPK
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK

Query:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        N+VRDPRFESL+G+LDV+GFKKRYSFIYENNLPAEKEELKKQLRK +D NVVEELKKQLSWIDKQFKSDSTKRVDAAILA HKKKEREAAKHGKKPFYLK
Subjt:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS
        KSEIRKQRL EKY +LKSTGKLDAY+ERRRRKNAAKDRRYIPYQRS
Subjt:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS

A0A6J1I8W9 ribosomal RNA processing protein 36 homolog2.5e-11089.43Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK
        MKKH +SVPSS K++ME+E EDLE SSS++SLDSEEENIERELADVTFEELQR RSDGSHSMYQKT +EKKG RANKNRPMEVSS+KPV RFREVIQAPK
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK

Query:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        N+VRDPRFESL+G+LDV+GFKKRYSFIYENNLPAEKEELKKQLRKTND NVVEELKKQLSWIDKQFKSDSTKRVDAAILA HKKKEREAAKHGKKPFYLK
Subjt:  NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS
        KSEIRKQRL EKY +LKSTGKLDAY+ERRRRKNAAKDRRYIPYQRS
Subjt:  KSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRS

SwissProt top hitse value%identityAlignment
A6RKG5 rRNA biogenesis protein rrp364.5e-2434.34Show/hide
Query:  SVPS-SGKKIME--EESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKK---------------EKKGG--------RANKNRP
        S PS +GK   E    S++      D+ L   EE      A ++F  L +A++  S    + +K                E+K G        R++KN P
Subjt:  SVPS-SGKKIME--EESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKK---------------EKKGG--------RANKNRP

Query:  MEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILA
         EVSS+K VSR REV+   K  +RDPRFE  +G +D+   +K Y F+ +     E ++LK+ +RKT D +  E+LK++L  ++ + K+D+ KR    +L 
Subjt:  MEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILA

Query:  KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQR
        KH+K+E+E  K GK P+YLKK+E +K+ L++ +  LK   +LD  +ERRR+K   K+++ +P  R
Subjt:  KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQR

A7E4K0 rRNA biogenesis protein rrp365.3e-2534.07Show/hide
Query:  SSVPSSGKKIMEEESEDLESSS-------SDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGG-----------------------RA
        SS  S+  +I  +++E+ ESSS        +++ +SEEE      A ++F  L +A++  S    + +KK KK                         R+
Subjt:  SSVPSSGKKIMEEESEDLESSS-------SDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGG-----------------------RA

Query:  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVD
        +KN P E+SS+K VSR REV+   K  +RDPRF+   G +D+   +K Y F+ +     E ++L+K ++KT D +  E+LK+ L  ++ + K+D+ KR  
Subjt:  NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVD

Query:  AAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQR
          IL KH+K+E+E  K GK P+YLKK+E +K+ L++ Y  LK   +LD  +ERRR+K   K+++ +P  R
Subjt:  AAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQR

A7SL20 Ribosomal RNA processing protein 36 homolog5.1e-2836.84Show/hide
Query:  ESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQ-----------------KTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKN
        +S D ES + D S + E E+++ EL+ + F ELQ  +       Y                  +TKK+K  G      P E+SS++ V + R+V+Q  K 
Subjt:  ESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQ-----------------KTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKN

Query:  VVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKK
        + RDPRF+ LSG  + D F+K YSF+ +  +  EK+ ++K+L+KT +    + L   L  +++Q +S  +         K K+ ERE  + GKKPFYL+K
Subjt:  VVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKK

Query:  SEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKD
        SE++K  L EKY  LKS GKL  Y+ +RR+K A+KDRR++P +R  D
Subjt:  SEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKD

B6K8A0 rRNA biogenesis protein rrp362.6e-2432.94Show/hide
Query:  EEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNR-----------------------PMEVSSRKPVSRFR
        E ES D  +  S++  D   E+ +R+L  + F EL  A+        + T  +K G + +KNR                       P+E+SS++ V RFR
Subjt:  EEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNR-----------------------PMEVSSRKPVSRFR

Query:  EVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHG
        EV+  PK + RDPRF++LSGNL+VD  K  Y F+ E  L +E ++L+++L+   +    E +K+ L  +  + +        A +L +H++ E+E  + G
Subjt:  EVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHG

Query:  KKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQR
        KKPFYLKKSE +K   ++KY S++ T  LD Y+E+++++ A K+++ +P  R
Subjt:  KKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQR

C7YTL6 rRNA biogenesis protein RRP361.1e-2232.81Show/hide
Query:  EESEDLESSSSDDSLDSEEENIER----ELADVTFEELQRA---------RSDGSHSMYQ--------------KTKKEKKGGRANKNRPMEVSSRKPVS
        +E ED E S S++  + E E  E+    +L+ ++F  L +A         RS  S +  +              ++K + K  R++K+ P E +S+KPVS
Subjt:  EESEDLESSSSDDSLDSEEENIER----ELADVTFEELQRA---------RSDGSHSMYQ--------------KTKKEKKGGRANKNRPMEVSSRKPVS

Query:  RFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAA
        R RE++   +   RDPRF+ L G +D +   K Y+F+ E     E  +L+ Q++KT D    E++K+QL  ++ + K+   K  +  +L +H+KKE+E  
Subjt:  RFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAA

Query:  KHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPY
          GK PFYLK+SE +KQ LV++Y  + S G++D  +ER+R+K A K+++ + +
Subjt:  KHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPY

Arabidopsis top hitse value%identityAlignment
AT1G12650.1 unknown protein4.1e-6555.78Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGG--RANKNRPMEVSSRKPVSRFREVIQA
        MK  G    SS K + E+  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K  + KK G  RANKNRPMEVSS+KPVSR+REV+  
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGG--RANKNRPMEVSSRKPVSRFREVIQA

Query:  PKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPF
        PK  VRDPRF  L G LDV+GF+KRY+F +E+ LP E+EELKK+L+KT +P  ++ELK QL++++K  K + ST+   AAIL +HKKKEREAAK GK+P+
Subjt:  PKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPF

Query:  YLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKD
        YLKKSEIRKQ L+EKY SLK +GKL +Y+++RR+KNA KD R++PY+R+++
Subjt:  YLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKD

AT1G12650.2 unknown protein4.1e-6555.78Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGG--RANKNRPMEVSSRKPVSRFREVIQA
        MK  G    SS K + E+  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K  + KK G  RANKNRPMEVSS+KPVSR+REV+  
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGG--RANKNRPMEVSSRKPVSRFREVIQA

Query:  PKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPF
        PK  VRDPRF  L G LDV+GF+KRY+F +E+ LP E+EELKK+L+KT +P  ++ELK QL++++K  K + ST+   AAIL +HKKKEREAAK GK+P+
Subjt:  PKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPF

Query:  YLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKD
        YLKKSEIRKQ L+EKY SLK +GKL +Y+++RR+KNA KD R++PY+R+++
Subjt:  YLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKD

AT1G12650.3 unknown protein4.1e-6555.78Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGG--RANKNRPMEVSSRKPVSRFREVIQA
        MK  G    SS K + E+  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K  + KK G  RANKNRPMEVSS+KPVSR+REV+  
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGG--RANKNRPMEVSSRKPVSRFREVIQA

Query:  PKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPF
        PK  VRDPRF  L G LDV+GF+KRY+F +E+ LP E+EELKK+L+KT +P  ++ELK QL++++K  K + ST+   AAIL +HKKKEREAAK GK+P+
Subjt:  PKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPF

Query:  YLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKD
        YLKKSEIRKQ L+EKY SLK +GKL +Y+++RR+KNA KD R++PY+R+++
Subjt:  YLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKD

AT1G12650.4 unknown protein4.1e-6555.78Show/hide
Query:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGG--RANKNRPMEVSSRKPVSRFREVIQA
        MK  G    SS K + E+  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K  + KK G  RANKNRPMEVSS+KPVSR+REV+  
Subjt:  MKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGG--RANKNRPMEVSSRKPVSRFREVIQA

Query:  PKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPF
        PK  VRDPRF  L G LDV+GF+KRY+F +E+ LP E+EELKK+L+KT +P  ++ELK QL++++K  K + ST+   AAIL +HKKKEREAAK GK+P+
Subjt:  PKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPF

Query:  YLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKD
        YLKKSEIRKQ L+EKY SLK +GKL +Y+++RR+KNA KD R++PY+R+++
Subjt:  YLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCGATTTCGTTGGCTATTAAGATGAGTGAGGTAAAAGTCAAAAAGAGAATGCCGAGAGAGGGAGGAGTCGGTGACCGAGTCACCACCTCACTCGTCTTTTCTCT
TCTCCTCGACGTCCTCGTCTCCGGCCACCGTCGACCCCGTCTCCCTCCGCCCCCTCGATTTCTCCTCAGTTCTCAAGAGGCCAATATTATCAATCTTGGGACTGGAATGA
AGAAACATGGTAGTTCCGTTCCTAGCTCTGGCAAAAAAATCATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGAAGAGGAGAAT
ATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAAAAAGAGAAGAAAGGTGGGCGAGC
AAACAAGAACAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTTATTCAGGCTCCTAAAAATGTGGTACGTGATCCACGTTTTGAATCTTTAT
CTGGTAATCTTGATGTTGATGGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGAATTGAAGAAGCAGTTAAGGAAAACCAATGAT
CCAAATGTTGTTGAAGAACTAAAGAAACAATTGTCTTGGATTGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAA
AGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTCGTCGAAAAATACACCAGTCTTAAGTCCACTGGGAAGC
TTGATGCTTATGTGGAAAGGAGGAGGAGGAAAAATGCTGCAAAAGATCGTAGATACATACCATATCAAAGATCTAAAGATTGGACATTGAGCCTTGGAAAAGGCAAGCAT
CTGTTGTTGACTGTTGAATTGTTAGAATCGATCATGGCGGAAATGGTGAAATTGCTGAATCTAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCGATTTCGTTGGCTATTAAGATGAGTGAGGTAAAAGTCAAAAAGAGAATGCCGAGAGAGGGAGGAGTCGGTGACCGAGTCACCACCTCACTCGTCTTTTCTCT
TCTCCTCGACGTCCTCGTCTCCGGCCACCGTCGACCCCGTCTCCCTCCGCCCCCTCGATTTCTCCTCAGTTCTCAAGAGGCCAATATTATCAATCTTGGGACTGGAATGA
AGAAACATGGTAGTTCCGTTCCTAGCTCTGGCAAAAAAATCATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGAAGAGGAGAAT
ATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAAAAAGAGAAGAAAGGTGGGCGAGC
AAACAAGAACAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTTATTCAGGCTCCTAAAAATGTGGTACGTGATCCACGTTTTGAATCTTTAT
CTGGTAATCTTGATGTTGATGGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGAATTGAAGAAGCAGTTAAGGAAAACCAATGAT
CCAAATGTTGTTGAAGAACTAAAGAAACAATTGTCTTGGATTGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAA
AGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTCGTCGAAAAATACACCAGTCTTAAGTCCACTGGGAAGC
TTGATGCTTATGTGGAAAGGAGGAGGAGGAAAAATGCTGCAAAAGATCGTAGATACATACCATATCAAAGATCTAAAGATTGGACATTGAGCCTTGGAAAAGGCAAGCAT
CTGTTGTTGACTGTTGAATTGTTAGAATCGATCATGGCGGAAATGGTGAAATTGCTGAATCTAACCTGA
Protein sequenceShow/hide protein sequence
MLSISLAIKMSEVKVKKRMPREGGVGDRVTTSLVFSLLLDVLVSGHRRPRLPPPPRFLLSSQEANIINLGTGMKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEEN
IERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTND
PNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSKDWTLSLGKGKH
LLLTVELLESIMAEMVKLLNLT