; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G01060 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G01060
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationClcChr08:1740563..1742363
RNA-Seq ExpressionClc08G01060
SyntenyClc08G01060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN76591.1 hypothetical protein VITISV_020293 [Vitis vinifera]1.1e-5552.3Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD
        M+ PP FE +    KVCKLKKS YGLKQ PRAWFERFG+ +                                    TG++  E+  LKGKLA +F+ KD
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD

Query:  LGTLKYFLGTKFARSKQDI---------------AFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSIS
        LG LKYFLG +FARSK+ I               AF++SMVSQFMHAPG  HFEAV  ILRYLKGT  +G+ FK  GHL +E Y +A  AGS  + RS S
Subjt:  LGTLKYFLGTKFARSKQDI---------------AFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSIS

Query:  GYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
        GYCSFVGGNLVTWR+KKQ+VVARSSA+ EFRA+A+  CE
Subjt:  GYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

RVW26168.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.9e-5555.91Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAVT-----------------GNEEGEMNNLKGKLANDFQTKDLGTLKYFLGTKFARSKQDI
        M+ PP FE +    KVCKLKKS YGLKQ PRAWFE FG+ +                   NEE     LK KLA +F+ KDLG LKYFLG  FARSK+ I
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAVT-----------------GNEEGEMNNLKGKLANDFQTKDLGTLKYFLGTKFARSKQDI

Query:  ---------------AFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYCSFVGGNLVTWRNKKQS
                       AF++SMVSQ MHAP   HFEAVY I RYLKGTP +G+ FK  GHL +E YT+AD AGS  + RS SGY SFVGGNL+TWR+KKQ+
Subjt:  ---------------AFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYCSFVGGNLVTWRNKKQS

Query:  VVARSSAEVEFRALAYDTCE
        VVARSSAE EFRA+A+D C+
Subjt:  VVARSSAEVEFRALAYDTCE

RVW77317.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.1e-5552.3Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD
        M+ PP FE +    KVCKLKKS YGLKQ PRAWFERFG+ +                                    TG++  E+  LKGKLA +F+ KD
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD

Query:  LGTLKYFLGTKFARSKQDI---------------AFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSIS
        LG LKYFLG +FARSK+ I               AF++SMVSQFMHAPG  HFEAV  ILRYLKGT  +G+ FK  GHL +E Y +A  AGS  + RS S
Subjt:  LGTLKYFLGTKFARSKQDI---------------AFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSIS

Query:  GYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
        GYCSFVGGNLVTWR+KKQ+VVARSSA+ EFRA+A+  CE
Subjt:  GYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

RVW93810.1 Protein FORGETTER 1 [Vitis vinifera]1.1e-5551.69Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD
        M+ PP FE +    KVCKLK+S YGLKQ PRAWFE FG+ +                                    TG++  E+  LKGKL  +F+ KD
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD

Query:  LGTLKYFLGTKFARSKQDIAF------------AISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYC
        LG LKYFLG +FA+SK+ I               +SMVSQFMHAPG  HFE VY ILRYLKGTP +G+ FK  GHL +E YT+AD AGS  + RS  GYC
Subjt:  LGTLKYFLGTKFARSKQDIAF------------AISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYC

Query:  SFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
        SFVGGNLVTWR+KKQ+VVARSSAE EFRA+A+  CE
Subjt:  SFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

XP_012491126.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105803458, partial [Gossypium raimondii]5.6e-5553.1Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRA------------------------------------VTGNEEGEMNNLKGKLANDFQTKD
        M+ PP FE N   ++VCKLKKS YGLKQ PRAWF RF +A                                    +TGN+  E+  LK  L  +F+ KD
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRA------------------------------------VTGNEEGEMNNLKGKLANDFQTKD

Query:  LGTLKYFLGTKFARSKQDIAFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYCSFVGGNLVTWRN
        LG+LKYFLG + AR K+DIAF++S++SQ+MHAP   H EA Y ILRYLKGTP KG+ FKK  +  VE+YT+AD AGS  + RS SGYCS+V GNLVTWR+
Subjt:  LGTLKYFLGTKFARSKQDIAFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYCSFVGGNLVTWRN

Query:  KKQSVVARSSAEVEFRALAYDTCEGV
        KKQSVVARSSAE E+RAL++  CEGV
Subjt:  KKQSVVARSSAEVEFRALAYDTCEGV

TrEMBL top hitse value%identityAlignment
A0A2N9G304 Reverse transcriptase Ty1/copia-type domain-containing protein8.4e-5745.83Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD
        M+LPP FE  L  +KVC+L+KS YGLKQ PRAWFERFGRAV                                    TG++  E+  LK +LA++F+ KD
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD

Query:  LGTLKYFLGTKFARSKQ----------------------------------------------------------------DIAFAISMVSQFMHAPGST
        LG LKYFLG +FA+SK+                                                                DIAF++SMVSQFMH+PG  
Subjt:  LGTLKYFLGTKFARSKQ----------------------------------------------------------------DIAFAISMVSQFMHAPGST

Query:  HFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
        HFEAVY ILRYLKGTP KG+ FKK GHL +E YT+AD AGS T+ RS SGYCSFVGGNLVTWR+KKQ+VVARSSAE EFR +A+  CE
Subjt:  HFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

A0A2N9GKJ5 Uncharacterized protein2.2e-5746.18Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD
        M+LPP FE  L  +KVC+L+KS YGLKQ PRAWFERFGRAV                                    TG++  E+  LK +LA++F+ KD
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD

Query:  LGTLKYFLGTKFARSKQ----------------------------------------------------------------DIAFAISMVSQFMHAPGST
        LG LKYFLG +FA+SK+                                                                DIAF++SMVSQFMH+PG  
Subjt:  LGTLKYFLGTKFARSKQ----------------------------------------------------------------DIAFAISMVSQFMHAPGST

Query:  HFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
        HFEAVY ILRYLKGTP KG+ FKK+GHL +E YT+AD AGS T+ RS SGYCSFVGGNLVTWR+KKQ+VVARSSAE EFRA+A+  CE
Subjt:  HFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

A0A438GYS9 Retrovirus-related Pol polyprotein from transposon RE15.4e-5652.3Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD
        M+ PP FE +    KVCKLKKS YGLKQ PRAWFERFG+ +                                    TG++  E+  LKGKLA +F+ KD
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD

Query:  LGTLKYFLGTKFARSKQDI---------------AFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSIS
        LG LKYFLG +FARSK+ I               AF++SMVSQFMHAPG  HFEAV  ILRYLKGT  +G+ FK  GHL +E Y +A  AGS  + RS S
Subjt:  LGTLKYFLGTKFARSKQDI---------------AFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSIS

Query:  GYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
        GYCSFVGGNLVTWR+KKQ+VVARSSA+ EFRA+A+  CE
Subjt:  GYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

A0A438IAS2 Protein FORGETTER 15.4e-5651.69Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD
        M+ PP FE +    KVCKLK+S YGLKQ PRAWFE FG+ +                                    TG++  E+  LKGKL  +F+ KD
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD

Query:  LGTLKYFLGTKFARSKQDIAF------------AISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYC
        LG LKYFLG +FA+SK+ I               +SMVSQFMHAPG  HFE VY ILRYLKGTP +G+ FK  GHL +E YT+AD AGS  + RS  GYC
Subjt:  LGTLKYFLGTKFARSKQDIAF------------AISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSISGYC

Query:  SFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
        SFVGGNLVTWR+KKQ+VVARSSAE EFRA+A+  CE
Subjt:  SFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

A5B9C7 Uncharacterized protein5.4e-5652.3Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD
        M+ PP FE +    KVCKLKKS YGLKQ PRAWFERFG+ +                                    TG++  E+  LKGKLA +F+ KD
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAV------------------------------------TGNEEGEMNNLKGKLANDFQTKD

Query:  LGTLKYFLGTKFARSKQDI---------------AFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSIS
        LG LKYFLG +FARSK+ I               AF++SMVSQFMHAPG  HFEAV  ILRYLKGT  +G+ FK  GHL +E Y +A  AGS  + RS S
Subjt:  LGTLKYFLGTKFARSKQDI---------------AFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTN-RSIS

Query:  GYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
        GYCSFVGGNLVTWR+KKQ+VVARSSA+ EFRA+A+  CE
Subjt:  GYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1611.5e-1540.52Show/hide
Query:  SKQDIAFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGST-TNRSISGYCSFVGGNLVTWRNKKQSVVARSSAEVE
        ++ D+A A+ ++SQF   P  TH++A+  +LRYL+ T   G+ F + G   +  Y++AD AG   + RS SGY   + G  V+WR+KKQ  VA SS E E
Subjt:  SKQDIAFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGST-TNRSISGYCSFVGGNLVTWRNKKQSVVARSSAEVE

Query:  FRALAYDTCEGVALVL
        + AL+  T E V L +
Subjt:  FRALAYDTCEGVALVL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-949.6e-1826.21Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERF------------------------------------GRAVTGNEEGEMNNLKGKLANDFQTKD
        M  P  FE   + + VCKL KS YGLKQ PR W+ +F                                       + G ++G +  LKG L+  F  KD
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERF------------------------------------GRAVTGNEEGEMNNLKGKLANDFQTKD

Query:  LGTLKYFLGTKFAR-------------------------------------------------------------------------SKQDIAFAISMVS
        LG  +  LG K  R                                                                         ++ DIA A+ +VS
Subjt:  LGTLKYFLGTKFAR-------------------------------------------------------------------------SKQDIAFAISMVS

Query:  QFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTNR-SISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRA
        +F+  PG  H+EAV  ILRYL+GT    + F  +  + ++ YT+AD AG   NR S +GY     G  ++W++K Q  VA S+ E E+ A
Subjt:  QFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTNR-SISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRA

P92519 Uncharacterized mitochondrial protein AtMg008101.8e-1940.32Show/hide
Query:  LGTLKYFLGTKFARSKQDIAFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGST-TNRSISGYCSFVGGNLVTWRN
        +G L+Y   T     + DI++A+++V Q MH P    F+ +  +LRY+KGT   G+   KN  L+V+ + ++D AG T T RS +G+C+F+G N+++W  
Subjt:  LGTLKYFLGTKFARSKQDIAFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGST-TNRSISGYCSFVGGNLVTWRN

Query:  KKQSVVARSSAEVEFRALAYDTCE
        K+Q  V+RSS E E+RALA    E
Subjt:  KKQSVVARSSAEVEFRALAYDTCE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.0e-2328.22Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERF-----------------------GRA------------VTGNEEGEMNNLKGKLANDFQTKDL
        M+ PP F    R N VCKL+K+ YGLKQ PRAW+                          G++            +TGN+   ++N    L+  F  KD 
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERF-----------------------GRA------------VTGNEEGEMNNLKGKLANDFQTKDL

Query:  GTLKYFLGTKFAR----------------------------------------------------------------SKQDIAFAISMVSQFMHAPGSTH
          L YFLG +  R                                                                ++ DI++A++ +SQFMH P   H
Subjt:  GTLKYFLGTKFAR----------------------------------------------------------------SKQDIAFAISMVSQFMHAPGSTH

Query:  FEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTNR-SISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
         +A+  ILRYL GTP  GI  KK   L +  Y++AD AG   +  S +GY  ++G + ++W +KKQ  V RSS E E+R++A  + E
Subjt:  FEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTNR-SISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.2e-2126.48Show/hide
Query:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERF-----------------------GRA------------VTGNEEGEMNNLKGKLANDFQTKDL
        M+ PP F    R + VC+L+K+ YGLKQ PRAW+                          GR+            +TGN+   + +    L+  F  K+ 
Subjt:  MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERF-----------------------GRA------------VTGNEEGEMNNLKGKLANDFQTKDL

Query:  GTLKYFLGTKFAR----------------------------------------------------------------SKQDIAFAISMVSQFMHAPGSTH
          L YFLG +  R                                                                ++ D+++A++ +SQ+MH P   H
Subjt:  GTLKYFLGTKFAR----------------------------------------------------------------SKQDIAFAISMVSQFMHAPGSTH

Query:  FEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTNR-SISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
        + A+  +LRYL GTP  GI  KK   L +  Y++AD AG T +  S +GY  ++G + ++W +KKQ  V RSS E E+R++A  + E
Subjt:  FEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTNR-SISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.3e-2929.21Show/hide
Query:  MNLPPSFEA----NLRTNKVCKLKKSFYGLKQPPRAWFERFGRAVTG-----------------------------------NEEGEMNNLKGKLANDFQ
        M LPP + A    +L  N VC LKKS YGLKQ  R WF +F   + G                                   N +  ++ LK +L + F+
Subjt:  MNLPPSFEA----NLRTNKVCKLKKSFYGLKQPPRAWFERFGRAVTG-----------------------------------NEEGEMNNLKGKLANDFQ

Query:  TKDLGTLKYFLGTKFARS----------------------------------------------------------------KQDIAFAISMVSQFMHAP
         +DLG LKYFLG + ARS                                                                + DI+FA++ +SQF  AP
Subjt:  TKDLGTLKYFLGTKFARS----------------------------------------------------------------KQDIAFAISMVSQFMHAP

Query:  GSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAG-STTNRSISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE
           H +AV  IL Y+KGT  +G+ +     + ++++++A       T RS +GYC F+G +L++W++KKQ VV++SSAE E+RAL++ T E
Subjt:  GSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAG-STTNRSISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCE

AT5G14240.1 Thioredoxin superfamily protein1.1e-1363.64Show/hide
Query:  TCEGVALVLCQADPVLNDGQSGNDDGSRKSVLEGVRRKIIEKVVRDHED-ENDEG
        T E VAL+LCQ++PVLNDG+ G+DD SR++V+ GVRR+ IE+VV+DHED +ND+G
Subjt:  TCEGVALVLCQADPVLNDGQSGNDDGSRKSVLEGVRRKIIEKVVRDHED-ENDEG

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.4e-0833.77Show/hide
Query:  SKQDIAFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAG-STTNRSISGYCSFV
        ++ D+ FA++ +SQF  A  +   +AVY +L Y+KGT  +G+ +     L ++ + ++D A    T RS++G+CS V
Subjt:  SKQDIAFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAG-STTNRSISGYCSFV

ATMG00810.1 DNA/RNA polymerases superfamily protein1.2e-2040.32Show/hide
Query:  LGTLKYFLGTKFARSKQDIAFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGST-TNRSISGYCSFVGGNLVTWRN
        +G L+Y   T     + DI++A+++V Q MH P    F+ +  +LRY+KGT   G+   KN  L+V+ + ++D AG T T RS +G+C+F+G N+++W  
Subjt:  LGTLKYFLGTKFARSKQDIAFAISMVSQFMHAPGSTHFEAVYGILRYLKGTPRKGIRFKKNGHLHVEIYTNADCAGST-TNRSISGYCSFVGGNLVTWRN

Query:  KKQSVVARSSAEVEFRALAYDTCE
        K+Q  V+RSS E E+RALA    E
Subjt:  KKQSVVARSSAEVEFRALAYDTCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTACCACCAAGTTTTGAAGCCAACCTTAGAACCAACAAAGTGTGCAAGTTAAAGAAATCCTTCTATGGTCTTAAGCAGCCTCCTAGAGCGTGGTTTGAACGTTT
TGGTAGAGCAGTGACAGGTAATGAAGAAGGTGAGATGAACAACTTGAAGGGTAAACTAGCTAATGACTTCCAAACTAAAGATTTGGGAACTTTGAAATACTTCCTAGGGA
CGAAATTTGCTAGGTCGAAACAAGATATTGCTTTTGCTATCAGCATGGTAAGCCAGTTCATGCATGCCCCAGGGTCAACCCACTTTGAAGCCGTTTACGGAATTCTAAGA
TATTTGAAAGGGACTCCAAGAAAAGGGATACGATTTAAGAAGAATGGTCATTTACATGTGGAAATTTACACTAATGCTGACTGCGCAGGTAGTACAACAAATAGATCAAT
TTCTGGTTATTGTTCTTTTGTTGGAGGCAATCTAGTTACGTGGCGAAACAAAAAACAAAGTGTTGTAGCTAGGAGTAGTGCTGAAGTAGAATTTAGGGCTTTAGCCTATG
ACACTTGTGAAGGTGTAGCATTAGTTCTTTGTCAAGCAGATCCAGTGCTTAATGATGGTCAGTCAGGAAATGATGATGGATCGAGAAAATCCGTGCTTGAAGGCGTACGC
AGAAAGATAATCGAGAAAGTGGTGAGAGATCATGAAGATGAGAATGACGAAGGGTCTTCAAGTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTTACCACCAAGTTTTGAAGCCAACCTTAGAACCAACAAAGTGTGCAAGTTAAAGAAATCCTTCTATGGTCTTAAGCAGCCTCCTAGAGCGTGGTTTGAACGTTT
TGGTAGAGCAGTGACAGGTAATGAAGAAGGTGAGATGAACAACTTGAAGGGTAAACTAGCTAATGACTTCCAAACTAAAGATTTGGGAACTTTGAAATACTTCCTAGGGA
CGAAATTTGCTAGGTCGAAACAAGATATTGCTTTTGCTATCAGCATGGTAAGCCAGTTCATGCATGCCCCAGGGTCAACCCACTTTGAAGCCGTTTACGGAATTCTAAGA
TATTTGAAAGGGACTCCAAGAAAAGGGATACGATTTAAGAAGAATGGTCATTTACATGTGGAAATTTACACTAATGCTGACTGCGCAGGTAGTACAACAAATAGATCAAT
TTCTGGTTATTGTTCTTTTGTTGGAGGCAATCTAGTTACGTGGCGAAACAAAAAACAAAGTGTTGTAGCTAGGAGTAGTGCTGAAGTAGAATTTAGGGCTTTAGCCTATG
ACACTTGTGAAGGTGTAGCATTAGTTCTTTGTCAAGCAGATCCAGTGCTTAATGATGGTCAGTCAGGAAATGATGATGGATCGAGAAAATCCGTGCTTGAAGGCGTACGC
AGAAAGATAATCGAGAAAGTGGTGAGAGATCATGAAGATGAGAATGACGAAGGGTCTTCAAGTGATTAG
Protein sequenceShow/hide protein sequence
MNLPPSFEANLRTNKVCKLKKSFYGLKQPPRAWFERFGRAVTGNEEGEMNNLKGKLANDFQTKDLGTLKYFLGTKFARSKQDIAFAISMVSQFMHAPGSTHFEAVYGILR
YLKGTPRKGIRFKKNGHLHVEIYTNADCAGSTTNRSISGYCSFVGGNLVTWRNKKQSVVARSSAEVEFRALAYDTCEGVALVLCQADPVLNDGQSGNDDGSRKSVLEGVR
RKIIEKVVRDHEDENDEGSSSD