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Clc08G01090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G01090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box/LRR-repeat protein
Genome locationClcChr08:1759548..1766745
RNA-Seq ExpressionClc08G01090
SyntenyClc08G01090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]9.5e-2268.67Show/hide
Query:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM
        ES  RSFK FI RVLSKHC T+IQKLT TSS N DE V +E L+CYAGSHNVQQLCI+TY+IG  Y+W YC   CSS+ +LKM
Subjt:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]1.2e-2167.47Show/hide
Query:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM
        ES  RSFK FI RVLSKHC T+IQKLT TSS N DE V +E L+CYAGSHNVQQLC++TY+IG  Y+W YC   CSS+ +LKM
Subjt:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM

XP_008459618.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo]1.2e-2167.47Show/hide
Query:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM
        ES  RSFK FI RVLSKHC T+IQKLT TSS N DE V +E L+CYAGSHNVQQLC++TY+IG  Y+W YC   CSS+ +LKM
Subjt:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM

XP_038890213.1 uncharacterized protein LOC120079853 [Benincasa hispida]4.7e-2167.86Show/hide
Query:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIG-SSYDWKYCVSTCSSVTQLKM
        ES +R FK FI RVLSKHC TNIQKLT TSS + DELV +EFL+CYAGSHNVQQLCI+   IG   + W YC STCSS+ +LKM
Subjt:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIG-SSYDWKYCVSTCSSVTQLKM

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]7.8e-2464.52Show/hide
Query:  SLPHLRLGHRESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM
        SL   +    E+ E+SFK FI RVLSKHCTTNI KLT T+S+N DELV +EFL+CYAGS NVQQLCI+TYD    YDW YC S CSS+  LKM
Subjt:  SLPHLRLGHRESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM

TrEMBL top hitse value%identityAlignment
A0A0A0KUU7 F-box domain-containing protein9.6e-2065.06Show/hide
Query:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM
        ES  RSFK FI RVLS HC TNI KLT TSS N DE V +E L+CYAGSH VQQLCI+TY+I   Y+W YC   CSS+ +LKM
Subjt:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X16.0e-2267.47Show/hide
Query:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM
        ES  RSFK FI RVLSKHC T+IQKLT TSS N DE V +E L+CYAGSHNVQQLC++TY+IG  Y+W YC   CSS+ +LKM
Subjt:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM

A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X26.0e-2267.47Show/hide
Query:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM
        ES  RSFK FI RVLSKHC T+IQKLT TSS N DE V +E L+CYAGSHNVQQLC++TY+IG  Y+W YC   CSS+ +LKM
Subjt:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM

A0A5A7TCF1 F-box/LRR-repeat protein4.6e-2268.67Show/hide
Query:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM
        ES  RSFK FI RVLSKHC T+IQKLT TSS N DE V +E L+CYAGSHNVQQLCI+TY+IG  Y+W YC   CSS+ +LKM
Subjt:  ESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like4.0e-1860.98Show/hide
Query:  SVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM
        S + SFKNFI R+LS+ C T IQKL+ TSS N DE+V +E L+C+A  HNV++L +DTY I S YDWKYC+S CSS+T LKM
Subjt:  SVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGGGAATCCGTGACCGTGCTATGAGACAGTTGTTGTCACTTCCGCATCTTAGACTAGGACATAGAGAATCCGTGGAAAGATCCTTCAAGAATTTCATCAGTCG
AGTTTTATCAAAGCACTGCACCACAAACATTCAAAAACTTACCAACACTTCCTCCAAAAACCCAGATGAATTGGTTTTTCTAGAATTCTTGTTATGCTATGCTGGATCCC
ACAATGTTCAGCAACTTTGCATTGATACTTACGATATTGGTAGTAGTTATGACTGGAAGTACTGTGTTTCAACATGTTCATCTGTCACTCAGTTGAAGATGGGCTCGGAC
GCAAGCGTGGCCCACACAACGGCACACTCCACAAGCGAGGGTGTTGGGCGCACGCAAGGCCATGCAACATACGAGCATCACAAGCACACGCTATGCAACGAGCGACAAGG
CAACACGCACACAGTGTGCGGGAGCGGCAACCTTGATGCCATCTTGGCACAAGCGATCAAGCACGTACTCAAGGTAGGGCAAGCTTGGTCCAAGACCAAGGAAAGTGCAA
GCCATCAGGCATTTTTTGGAAGATCTCTTGCTAAGGAAGAACTTCGTTGCAAGGAGACCTCTCATCTCGATTCTTGTAAGCTTGATTTTGATAGTGCTTATCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGGGAATCCGTGACCGTGCTATGAGACAGTTGTTGTCACTTCCGCATCTTAGACTAGGACATAGAGAATCCGTGGAAAGATCCTTCAAGAATTTCATCAGTCG
AGTTTTATCAAAGCACTGCACCACAAACATTCAAAAACTTACCAACACTTCCTCCAAAAACCCAGATGAATTGGTTTTTCTAGAATTCTTGTTATGCTATGCTGGATCCC
ACAATGTTCAGCAACTTTGCATTGATACTTACGATATTGGTAGTAGTTATGACTGGAAGTACTGTGTTTCAACATGTTCATCTGTCACTCAGTTGAAGATGGGCTCGGAC
GCAAGCGTGGCCCACACAACGGCACACTCCACAAGCGAGGGTGTTGGGCGCACGCAAGGCCATGCAACATACGAGCATCACAAGCACACGCTATGCAACGAGCGACAAGG
CAACACGCACACAGTGTGCGGGAGCGGCAACCTTGATGCCATCTTGGCACAAGCGATCAAGCACGTACTCAAGGTAGGGCAAGCTTGGTCCAAGACCAAGGAAAGTGCAA
GCCATCAGGCATTTTTTGGAAGATCTCTTGCTAAGGAAGAACTTCGTTGCAAGGAGACCTCTCATCTCGATTCTTGTAAGCTTGATTTTGATAGTGCTTATCAATAA
Protein sequenceShow/hide protein sequence
MTKGIRDRAMRQLLSLPHLRLGHRESVERSFKNFISRVLSKHCTTNIQKLTNTSSKNPDELVFLEFLLCYAGSHNVQQLCIDTYDIGSSYDWKYCVSTCSSVTQLKMGSD
ASVAHTTAHSTSEGVGRTQGHATYEHHKHTLCNERQGNTHTVCGSGNLDAILAQAIKHVLKVGQAWSKTKESASHQAFFGRSLAKEELRCKETSHLDSCKLDFDSAYQ