CuGenDBv2

Gene ID	Clc08G01105
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Cytochrome c oxidase subunit 1
Genome location	ClcChr08:1808748..1813243
RNA-Seq Expression	Clc08G01105
Synteny	Clc08G01105
Gene Ontology terms	GO:0009060 - aerobic respiration (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0070469 - respirasome (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0020037 - heme binding (molecular function)
InterPro domains	IPR000883 - Cytochrome c oxidase subunit I IPR023616 - Cytochrome c oxidase-like, subunit I domain IPR036927 - Cytochrome c oxidase-like, subunit I superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ABY66627.1 cytochrome oxidase subunit I, partial [Echinocystis lobata]

6.8e-65

71.65

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       GSIFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

ABY83868.1 cytochrome oxidase subunit 1, partial [Citrullus lanatus subsp. vulgaris]

6.8e-65

71.65

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       GSIFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

ABY83874.1 cytochrome oxidase subunit 1, partial [Neoachmandra indica]

6.8e-65

71.65

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       GSIFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

ABY83917.1 cytochrome oxidase subunit 1, partial [Luffa acutangula]

6.8e-65

71.65

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Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       GSIFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

YP_009913642.1 cytochrome c oxidase subunit 1 [Luffa acutangula]

6.8e-65

71.65

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       GSIFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UCF6 Cytochrome c oxidase subunit 1

3.3e-65

71.65

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       GSIFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

A0A7D6J6S5 Cytochrome c oxidase subunit 1

3.3e-65

71.65

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       GSIFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

B0FA80 Cytochrome c oxidase subunit 1 (Fragment)

3.3e-65

71.65

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       GSIFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

B4XVS1 Cytochrome c oxidase subunit 1 (Fragment)

3.3e-65

71.65

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Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       GSIFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

G3EU24 Cytochrome c oxidase subunit 1

3.3e-65

71.65

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Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       GSIFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

SwissProt top hits

e value

%identity

Alignment

P07506 Cytochrome c oxidase subunit 1

7.6e-67

71.13

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       G IFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

P08742 Cytochrome c oxidase subunit 1

3.8e-66

70.62

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       G IFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN T  P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

P12786 Cytochrome c oxidase subunit 1

5.8e-67

71.13

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Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       G IFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

P14578 Cytochrome c oxidase subunit 1

3.8e-66

70.62

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       G IFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN T  P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

P68540 Cytochrome c oxidase subunit 1

3.8e-66

70.62

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       G IFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN T  P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGIR
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIR

Arabidopsis top hits

e value

%identity

Alignment

ATMG01360.1 cytochrome oxidase

1.3e-66

70.47

Show/hide

Query:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y
        +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG    +       G IFLFTIGGLTGIV ANSGLDI LHDT Y
Subjt:  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-Y

Query:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGI
        VVAHFHYVLSMGA+FALFAGF Y                   WITFF VN T  P+HFLGLS MP  IP+YP+AYAGWN LSSF SYIS+VGI
Subjt:  VVAHFHYVLSMGAIFALFAGFRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGACTTGGGAGTGTTGAAATACTTCCCCGGGGGCTATTACCATGTATCCAGGCTGGTTTATGCCATGATCAGTATCGGTGTTCTTAGATTTCTTGTTTGGGCTCA
TCATATGTTTACTGTGGGCTTTGACGTTGATACCCGTGCCTACTTCAACGTTGCTACCATGATCATAGCAACCCCCACTAGAATAAAAATCTTTAGTTGGATTGCTACCA
TGTGGGGCGGGTTTGATACAATACAAAACACCCATGGGTCCATCTTTTTGTTCACCATAGGAGGACTCACTGGAATAGTCTCGGCAAATTCAGGACTAGACATTACTCTA
CATGATACTTATGTGGTTGCACATTTCCATTATGTACTTTCTATGGGAGCCATTTTTGCTTTATTTGCAGGATTTCGCTATTGGATCACTTTTTTTCGGGTTAATTCGAC
CCTTCTTCCCATACATTTCTTAGGGCTTTCGAGTATGCCACATCACATTCCTAATTATCCAAATGCTTATGCTGGATGGAATACCCTTAGCAGTTTTTGCTCTTATATAT
CCATAGTTGGGATTCGCGTTTCTTCATGGTCATTCCTTCATGAAACTTACTTTTCAATTAATGCTATCTTTGGTCTGAGACAAATACATTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MEDLGVLKYFPGGYYHVSRLVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQNTHGSIFLFTIGGLTGIVSANSGLDITL
HDTYVVAHFHYVLSMGAIFALFAGFRYWITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIRVSSWSFLHETYFSINAIFGLRQIH

Clc08G01105 (gene) of Watermelon (cordophanus) v2 genome