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Clc08G01110 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G01110
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:1812103..1812429
RNA-Seq ExpressionClc08G01110
SyntenyClc08G01110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFC35842.1 hypothetical protein [Tanacetum cinerariifolium]1.9e-1884.75Show/hide
Query:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIK-PAPHGSNPTKDFYSSGGCYDHGS
        MSSPEFAETIPVSPPMVNK MDPTA+ MGVLYCIK P PHGS+PTKDF SSG  YDHGS
Subjt:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIK-PAPHGSNPTKDFYSSGGCYDHGS

KAF1856899.1 hypothetical protein Lal_00001930 [Lupinus albus]3.0e-0884.62Show/hide
Query:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPH
        MSSPEFA TIPVSPPMVNKKM+PTA+ MGVLYCI+P PH
Subjt:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPH

KAF3635473.1 ATP synthase subunit alpha, chloroplastic [Capsicum annuum]1.3e-1979.69Show/hide
Query:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPHGSNPTKDFYSSGGCYDHGSNVEVGT
        MSSPEFA TIPVSPPMVNKKM+PT + MGVLYCI+P PHGS+PTKDF SSG  YDHGS  EVGT
Subjt:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPHGSNPTKDFYSSGGCYDHGSNVEVGT

KAF5767741.1 hypothetical protein HanXRQr2_Chr14g0628261 [Helianthus annuus]7.8e-0987.18Show/hide
Query:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPH
        MSSPEFA TIPVSPPMVNKKMDPTA+ MGVLYCI+P PH
Subjt:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPH

TrEMBL top hitse value%identityAlignment
A0A6A5L812 Uncharacterized protein1.4e-0884.62Show/hide
Query:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPH
        MSSPEFA TIPVSPPMVNKKM+PTA+ MGVLYCI+P PH
Subjt:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPH

M8AUQ9 Uncharacterized protein8.4e-0984.62Show/hide
Query:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPH
        MSSPEFA TIPVSPPMVNKKM+PTA+ MGVLYCI+P PH
Subjt:  MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGTCCTGAATTTGCCGAGACTATTCCAGTGAGTCCTCCTATGGTGAACAAAAAGATGGACCCTACAGCAGATACCATGGGTGTTTTGTATTGTATCAAACCCGC
CCCACATGGTAGCAATCCAACTAAAGATTTTTATTCTAGTGGGGGTTGCTATGATCATGGTAGCAACGTTGAAGTAGGCACGGGTATCAACGTCAAAGCCCACAGTAAAC
ATATGATGAGCCCAAACAAGAAATCTAAGAACACCGATACTGATCATGGCATAAACCAGCCTGGATACCTGAAAACCAATTTTCTCGAAAAAGTTGAAACGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAGTCCTGAATTTGCCGAGACTATTCCAGTGAGTCCTCCTATGGTGAACAAAAAGATGGACCCTACAGCAGATACCATGGGTGTTTTGTATTGTATCAAACCCGC
CCCACATGGTAGCAATCCAACTAAAGATTTTTATTCTAGTGGGGGTTGCTATGATCATGGTAGCAACGTTGAAGTAGGCACGGGTATCAACGTCAAAGCCCACAGTAAAC
ATATGATGAGCCCAAACAAGAAATCTAAGAACACCGATACTGATCATGGCATAAACCAGCCTGGATACCTGAAAACCAATTTTCTCGAAAAAGTTGAAACGATATGA
Protein sequenceShow/hide protein sequence
MSSPEFAETIPVSPPMVNKKMDPTADTMGVLYCIKPAPHGSNPTKDFYSSGGCYDHGSNVEVGTGINVKAHSKHMMSPNKKSKNTDTDHGINQPGYLKTNFLEKVETI