CuGenDBv2

Gene ID	Clc08G01130
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Mediator of RNA polymerase II transcription subunit 17
Genome location	ClcChr08:1844135..1855951
RNA-Seq Expression	Clc08G01130
Synteny	Clc08G01130
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019313 - Mediator complex, subunit Med17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039269.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa]

0.0e+00

90.87

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQ-VFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLE
        KETNSLLRQVHHAIF EQ VFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLD IELPDRSDPLE
Subjt:  KETNSLLRQVHHAIFSEQ-VFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLE

Query:  KKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSME
        KKLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF ME
Subjt:  KKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSME

Query:  VPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK
        VP SILHPNSIQARTSDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK
Subjt:  VPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK

Query:  ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

XP_008459609.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo]

0.0e+00

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK
        KETNSLLRQVHHAIF EQVFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLD IELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P SILHPNSIQARTSDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIKA
Subjt:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

XP_011656092.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus]

0.0e+00

91.87

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDEDMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+R KNESTN SNQSS+NREKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK
        KETNSLLRQVHHAIFSEQVFDLVN+EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ  QTVEG N+ IL+NA+LPFDSLD IELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        PWSILHPNSI+ARTSD +QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+S NRY CDLADLPVIILLQVASQIILWLHEEAL WGIKA
Subjt:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

XP_022987637.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]

0.0e+00

88.82

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MD DMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDN SCDPSSVFRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+ENPL+RGKNESTNSSNQS +  EKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK
        KETNSLLRQVHHAIFSEQVFD VNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP+GQ CQTVE  NTGILDN NLPFDSLD IELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPN+ TFEIYLQQIFHELVF+KSND+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P S LHP SIQARTSDSH+MN+VTK+QF TKVVVNDDCITIEGEGAP+VVGLF GNSKD++SMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK 
Subjt:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        +RDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDDGLMEDRK NF+ SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG GGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

XP_038889914.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida]

0.0e+00

91.87

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDEDMKVSLDKLPVKRLEAIEE+GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQ
Subjt:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+RGKNESTNSSNQSS+NREKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK
        KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSV ISLVPSGQ CQTVEG NTGILDNANLPFDSLD IELPDRSDP EK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF++SNDRP S+LSRQSGQ +NDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P SILHPNSIQA TSD+HQMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
Subjt:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        NRDFLSLSFELEQGE LRLVAHVDP+DPQGCLSWWLVMDDGLMED+KL+FDSSDV+PEYRKFLGHLSLEVLHSTLMDLVSLCSGVG SL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXX2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

91.87

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDEDMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+R KNESTN SNQSS+NREKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK
        KETNSLLRQVHHAIFSEQVFDLVN+EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ  QTVEG N+ IL+NA+LPFDSLD IELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        PWSILHPNSI+ARTSD +QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+S NRY CDLADLPVIILLQVASQIILWLHEEAL WGIKA
Subjt:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

A0A1S4E2I2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

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Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK
        KETNSLLRQVHHAIF EQVFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLD IELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P SILHPNSIQARTSDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIKA
Subjt:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

A0A5A7TDC1 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.87

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQ-VFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLE
        KETNSLLRQVHHAIF EQ VFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLD IELPDRSDPLE
Subjt:  KETNSLLRQVHHAIFSEQ-VFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLE

Query:  KKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSME
        KKLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF ME
Subjt:  KKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSME

Query:  VPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK
        VP SILHPNSIQARTSDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK
Subjt:  VPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK

Query:  ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

A0A5D3BMZ9 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK
        KETNSLLRQVHHAIF EQVFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLD IELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P SILHPNSIQARTSDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIKA
Subjt:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

A0A6J1JAW7 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

88.82

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MD DMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDN SCDPSSVFRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+ENPL+RGKNESTNSSNQS +  EKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK
        KETNSLLRQVHHAIFSEQVFD VNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP+GQ CQTVE  NTGILDN NLPFDSLD IELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPN+ TFEIYLQQIFHELVF+KSND+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P S LHP SIQARTSDSH+MN+VTK+QF TKVVVNDDCITIEGEGAP+VVGLF GNSKD++SMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK 
Subjt:  PWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL
        +RDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDDGLMEDRK NF+ SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG GGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

SwissProt top hits

e value

%identity

Alignment

F4K460 Mediator of RNA polymerase II transcription subunit 17

4.1e-207

56.12

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTAL
        MD DM++SLD+LP+KRLE+IEE+G ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+T  
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTAL

Query:  KRVSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVK
                                 V+ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVK
Subjt:  KRVSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVK

Query:  RQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDD
        RQR+ A   +NEGFTIDL D+S  DP+S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++    + N  +  ++  + + +      EK   +DD
Subjt:  RQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDD

Query:  EYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDP
        +Y+KET+SLLR+VH +IF+EQ+FD++NREAFN  +G N++G+REN++++SI QG S+F+SL PSG++    +       ++A L  +S   +E  +  D 
Subjt:  EYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDP

Query:  LEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF
          KKL  PN  ++EIYLQQIFHE  F K+ D+  S   R S Q   D  SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT 
Subjt:  LEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF

Query:  SMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTW
         M VP SI+     + ++ D  +     KTQF TKVVV DDCI++E E  PNVVGL   +S ++ S+N+Y CD+ADLPV+IL QVASQI+ WL EEA T 
Subjt:  SMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTW

Query:  GIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC
        G KA+R+FLSLS E+ +GE + LVAHV+PED +GC+SWWLVM++G  E+R       + V E RK LGHLSL+VL+S LMDL++LC
Subjt:  GIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC

Arabidopsis top hits

e value

%identity

Alignment

AT5G20170.1 RNA polymerase II transcription mediators

2.9e-208

56.12

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTAL
        MD DM++SLD+LP+KRLE+IEE+G ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+T  
Subjt:  MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTAL

Query:  KRVSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVK
                                 V+ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVK
Subjt:  KRVSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVK

Query:  RQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDD
        RQR+ A   +NEGFTIDL D+S  DP+S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++    + N  +  ++  + + +      EK   +DD
Subjt:  RQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDD

Query:  EYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDP
        +Y+KET+SLLR+VH +IF+EQ+FD++NREAFN  +G N++G+REN++++SI QG S+F+SL PSG++    +       ++A L  +S   +E  +  D 
Subjt:  EYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDP

Query:  LEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF
          KKL  PN  ++EIYLQQIFHE  F K+ D+  S   R S Q   D  SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT 
Subjt:  LEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF

Query:  SMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTW
         M VP SI+     + ++ D  +     KTQF TKVVV DDCI++E E  PNVVGL   +S ++ S+N+Y CD+ADLPV+IL QVASQI+ WL EEA T 
Subjt:  SMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTW

Query:  GIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC
        G KA+R+FLSLS E+ +GE + LVAHV+PED +GC+SWWLVM++G  E+R       + V E RK LGHLSL+VL+S LMDL++LC
Subjt:  GIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGAAGACATGAAAGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAGAGCGGTCTAGAACGATTTCCATCAGATGTTGGTTATGAAGAGAA
ACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGC
AGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACTGCACTGAAGCGCGTATCTCAAGTGCCCTTCATTAAGGGTGCC
TTTTCTGGACGCAACCAAGACATTTTTGAGCTTTTGAAGGTGGAAGCTAATGATGCAGTAACAGTAGCTGGGATGACAAGGCCAAAACCGTTACCTAATGAAGTTTTGTC
AGATCTTGGAGTGTCTGTCGCAACGAAATTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGAT
TTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCA
TCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGTCATTCCCT
TCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGATCGTGGTAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATGAACAGGGAGAAGGAATTTA
CAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCA
TCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAACATTGCCAAAC
AGTTGAAGGTGTAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGATGAGATTGAATTACCAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGA
ATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTATAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAA
GGTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAAGTCCC
ATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACGTTTTCTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTA
CATCAGACAGTCATCAGATGAATAATGTCACCAAAACACAATTTCTGACTAAAGTGGTTGTAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTTGTT
GGCTTGTTCAACGGAAATTCCAAGGATATCCATTCAATGAACAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCGAGCCAAATTATTCT
TTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGATTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTGGTAGCCCATGTGG
ACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTTTGATGGAGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGG
AAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGCAGTGGAGTTGGTGGTAGCTTATAA

mRNA sequence

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AAAAATTTCAGGGACAAATTCGTCACTTCAGTTTTCTGCAGTCATCGGCTGAGCCCTCTGCCAGCGAACTTTCATCCCGATCGCGGACTTGTCTTCCATTCTAGGGCTCC
CTCCAAACCTTTTCAATCCCGACATTATTCCGGTACAATACTGTGTGAATATGGACGAAGACATGAAAGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATA
GAAGAGAGCGGTCTAGAACGATTTCCATCAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAA
AAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTA
TCAACACTGCACTGAAGCGCGTATCTCAAGTGCCCTTCATTAAGGGTGCCTTTTCTGGACGCAACCAAGACATTTTTGAGCTTTTGAAGGTGGAAGCTAATGATGCAGTA
ACAGTAGCTGGGATGACAAGGCCAAAACCGTTACCTAATGAAGTTTTGTCAGATCTTGGAGTGTCTGTCGCAACGAAATTACAATGCTTTCGACATCTTGGTAAATATTT
CAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTG
CTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGAT
TCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGTCATTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGATCGTGGTAAAAATGA
GTCTACAAATTCTTCCAATCAGTCTTCAATGAACAGGGAGAAGGAATTTACAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCA
TTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAG
GGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAACATTGCCAAACAGTTGAAGGTGTAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGA
TGAGATTGAATTACCAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTA
TAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAAGGTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATG
TTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACGTTTTC
TATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTACATCAGACAGTCATCAGATGAATAATGTCACCAAAACACAATTTCTGACTAAAGTGGTTG
TAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATCCATTCAATGAACAGATATGGTTGTGACTTG
GCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGATTTCCTAAGTCT
GTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTGGTAGCCCATGTGGACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTTTGATGG
AGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGT
TTGTGCAGTGGAGTTGGTGGTAGCTTATAACCATGCCTTTCTTGTCTGGTATTACAAATAGAAATTGCATTGAGTTCTTGTAATTTCTGCCTCTAGATTTTCAAATCTAA
TGATATCTTCAGTTTTTGTCCGCATTGCTTACTCAACTTCATATATTATTTATATAACTATGCAAAAATAGTAAATGTAGGGCCATGGATGGTTGGAAGCTGACTTCAAG
ATGAAGAAACCGTTTAGCGAGGCTTTGTTTTGGTAACCATTTAGTTTTTTTTTTATTCACTTGGTTATTATGCTTTGTGTCTTTTCAAAAAACTATTTCAGAAACTTATT
TTCTTTTGGTAAAAGTACTCTTTTAGTCCCTAAGTTTTTAAGATGTGGATTTGGTCTGTAATGTTTTAAATTGTCCATTTTAGTCC

Protein sequence

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MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGA
FSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNS
SCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAFNP
SLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQ
GSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVV
GLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYR
KFLGHLSLEVLHSTLMDLVSLCSGVGGSL

Clc08G01130 (gene) of Watermelon (cordophanus) v2 genome